RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 MORC4Q8TE76 937 aa22.06■■□□□ 1.12
HOXA9-202ENST00000396345 TMX3Q96JJ7 454 aa22.06■■□□□ 1.12
HOXA9-202ENST00000396345 LLPHQ9BRT6 129 aaKnown RBP22.06■■□□□ 1.12
HOXA9-202ENST00000396345 RNF208Q9H0X6 261 aa22.06■■□□□ 1.12
HOXA9-202ENST00000396345 GLT8D2Q9H1C3 349 aa22.06■■□□□ 1.12
HOXA9-202ENST00000396345 SH3GLB2Q9NR46 395 aa22.06■■□□□ 1.12
HOXA9-202ENST00000396345 VPS54Q9P1Q0 977 aa22.06■■□□□ 1.12
HOXA9-202ENST00000396345 DDX49Q9Y6V7 483 aaKnown RBP22.06■■□□□ 1.12
HOXA9-202ENST00000396345 ESYT2A0FGR8 921 aa22.05■■□□□ 1.12
HOXA9-202ENST00000396345 JAK2O60674 1132 aa22.05■■□□□ 1.12
HOXA9-202ENST00000396345 CCND3P30281 292 aaPredicted RBP22.05■■□□□ 1.12
HOXA9-202ENST00000396345 RGS19P49795 217 aa22.05■■□□□ 1.12
HOXA9-202ENST00000396345 UBE2SQ16763 222 aa22.05■■□□□ 1.12
HOXA9-202ENST00000396345 TEX2Q8IWB9 1127 aa22.05■■□□□ 1.12
HOXA9-202ENST00000396345 CCDC148Q8NFR7 591 aa22.05■■□□□ 1.12
HOXA9-202ENST00000396345 WASF1Q92558 559 aa22.05■■□□□ 1.12
HOXA9-202ENST00000396345 AIFM3Q96NN9 605 aa22.05■■□□□ 1.12
HOXA9-202ENST00000396345 ZMYND12Q9H0C1 365 aa22.05■■□□□ 1.12
HOXA9-202ENST00000396345 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.05■■□□□ 1.12
HOXA9-202ENST00000396345 ABHD16BQ9H3Z7 469 aa22.05■■□□□ 1.12
HOXA9-202ENST00000396345 PXMP2Q9NR77 195 aa22.05■■□□□ 1.12
HOXA9-202ENST00000396345 FDPSP14324 419 aaKnown RBP22.04■■□□□ 1.12
HOXA9-202ENST00000396345 EIF2AK2P19525 551 aaKnown RBP22.04■■□□□ 1.12
HOXA9-202ENST00000396345 CNGA1P29973 690 aa22.04■■□□□ 1.12
HOXA9-202ENST00000396345 PDE4DQ08499 809 aa22.04■■□□□ 1.12
HOXA9-202ENST00000396345 IWS1Q96ST2 819 aa22.04■■□□□ 1.12
HOXA9-202ENST00000396345 TMEM106CQ9BVX2 250 aa22.04■■□□□ 1.12
HOXA9-202ENST00000396345 C6orf50Q9HD87 102 aa22.04■■□□□ 1.12
HOXA9-202ENST00000396345 ZHX1Q9UKY1 873 aaPredicted RBP22.04■■□□□ 1.12
HOXA9-202ENST00000396345 ZNF865P0CJ78 1059 aaPredicted RBP22.03■■□□□ 1.12
HOXA9-202ENST00000396345 EDNRBP24530 442 aa22.03■■□□□ 1.12
HOXA9-202ENST00000396345 GNA11P29992 359 aa22.03■■□□□ 1.12
HOXA9-202ENST00000396345 MLLT1Q03111 559 aaPredicted RBP22.03■■□□□ 1.12
HOXA9-202ENST00000396345 ACVR2BQ13705 512 aa22.03■■□□□ 1.12
HOXA9-202ENST00000396345 SHISA4Q96DD7 197 aa22.03■■□□□ 1.12
HOXA9-202ENST00000396345 ALG1Q9BT22 464 aa22.03■■□□□ 1.12
HOXA9-202ENST00000396345 CENPFP49454 3210 aa22.02■■□□□ 1.12
HOXA9-202ENST00000396345 SPDYE3A6NKU9 549 aa22.02■■□□□ 1.12
HOXA9-202ENST00000396345 XBP1P17861 261 aa22.02■■□□□ 1.12
HOXA9-202ENST00000396345 NLRP5P59047 1200 aa22.02■■□□□ 1.12
HOXA9-202ENST00000396345 EEPD1Q7L9B9 569 aa22.02■■□□□ 1.12
HOXA9-202ENST00000396345 FAM177A1Q8N128 213 aaPredicted RBP22.02■■□□□ 1.12
HOXA9-202ENST00000396345 PDCD2LQ9BRP1 358 aa22.02■■□□□ 1.12
HOXA9-202ENST00000396345 PAK6Q9NQU5 681 aaPredicted RBP22.02■■□□□ 1.12
HOXA9-202ENST00000396345 NR3C2P08235 984 aa22.01■■□□□ 1.11
HOXA9-202ENST00000396345 PGM5Q15124 567 aa22.01■■□□□ 1.11
HOXA9-202ENST00000396345 STXBP2Q15833 593 aa22.01■■□□□ 1.11
HOXA9-202ENST00000396345 FBXO16Q8IX29 292 aaPredicted RBP22.01■■□□□ 1.11
HOXA9-202ENST00000396345 BICD2Q8TD16 824 aa22.01■■□□□ 1.11
HOXA9-202ENST00000396345 DEFB118Q96PH6 123 aa22.01■■□□□ 1.11
HOXA9-202ENST00000396345 KATNBL1Q9H079 304 aa22.01■■□□□ 1.11
HOXA9-202ENST00000396345 VTA1Q9NP79 307 aa22.01■■□□□ 1.11
HOXA9-202ENST00000396345 PCDHA6Q9UN73 950 aa22.01■■□□□ 1.11
HOXA9-202ENST00000396345 PCDHA8Q9Y5H6 950 aa22.01■■□□□ 1.11
HOXA9-202ENST00000396345 SEPT4O43236 478 aa22■■□□□ 1.11
HOXA9-202ENST00000396345 FOSP01100 380 aaPredicted RBP22■■□□□ 1.11
HOXA9-202ENST00000396345 GJB1P08034 283 aa22■■□□□ 1.11
HOXA9-202ENST00000396345 MYCLP12524 364 aaPredicted RBP22■■□□□ 1.11
HOXA9-202ENST00000396345 HMGN5P82970 282 aaKnown RBP22■■□□□ 1.11
HOXA9-202ENST00000396345 FAM184BQ9ULE4 1060 aa22■■□□□ 1.11
HOXA9-202ENST00000396345 FRMPD4Q14CM0 1322 aa22■■□□□ 1.11
HOXA9-202ENST00000396345 LRRC37A2A6NM11 1700 aa22■■□□□ 1.11
HOXA9-202ENST00000396345 CCND2P30279 289 aa21.99■■□□□ 1.11
HOXA9-202ENST00000396345 CLK2P49760 499 aaKnown RBP21.99■■□□□ 1.11
HOXA9-202ENST00000396345 AP3B2Q13367 1082 aa21.99■■□□□ 1.11
HOXA9-202ENST00000396345 JAKMIP3Q5VZ66 844 aa21.99■■□□□ 1.11
HOXA9-202ENST00000396345 VSIG10LQ86VR7 867 aa21.99■■□□□ 1.11
HOXA9-202ENST00000396345 REXO1Q8N1G1 1221 aaKnown RBP21.99■■□□□ 1.11
HOXA9-202ENST00000396345 IL31RAQ8NI17 732 aa21.99■■□□□ 1.11
HOXA9-202ENST00000396345 EHMT1Q9H9B1 1298 aa21.99■■□□□ 1.11
HOXA9-202ENST00000396345 TMEM260Q9NX78 707 aa21.99■■□□□ 1.11
HOXA9-202ENST00000396345 DDX20Q9UHI6 824 aaKnown RBP21.99■■□□□ 1.11
HOXA9-202ENST00000396345 KCNJ14Q9UNX9 436 aa21.99■■□□□ 1.11
HOXA9-202ENST00000396345 KIAA0100Q14667 2235 aaKnown RBP21.99■■□□□ 1.11
HOXA9-202ENST00000396345 ADAMTS3O15072 1205 aa21.98■■□□□ 1.11
HOXA9-202ENST00000396345 MSCO60682 206 aa21.98■■□□□ 1.11
HOXA9-202ENST00000396345 EIF3JO75822 258 aaKnown RBP21.98■■□□□ 1.11
HOXA9-202ENST00000396345 AKR1A1P14550 325 aa21.98■■□□□ 1.11
HOXA9-202ENST00000396345 CCDC144BQ3MJ40 725 aa21.98■■□□□ 1.11
HOXA9-202ENST00000396345 MCTP2Q6DN12 878 aa21.98■■□□□ 1.11
HOXA9-202ENST00000396345 GALNT17Q6IS24 598 aa21.98■■□□□ 1.11
HOXA9-202ENST00000396345 TAPT1Q6NXT6 567 aa21.98■■□□□ 1.11
HOXA9-202ENST00000396345 SNX21Q969T3 373 aa21.98■■□□□ 1.11
HOXA9-202ENST00000396345 PHF20Q9BVI0 1012 aa21.98■■□□□ 1.11
HOXA9-202ENST00000396345 ANO3Q9BYT9 981 aa21.98■■□□□ 1.11
HOXA9-202ENST00000396345 PDGFCQ9NRA1 345 aa21.98■■□□□ 1.11
HOXA9-202ENST00000396345 GJB4Q9NTQ9 266 aa21.98■■□□□ 1.11
HOXA9-202ENST00000396345 PCDHA4Q9UN74 947 aa21.98■■□□□ 1.11
HOXA9-202ENST00000396345 SGPL1O95470 568 aa21.97■■□□□ 1.11
HOXA9-202ENST00000396345 LHX8Q68G74 356 aa21.97■■□□□ 1.11
HOXA9-202ENST00000396345 BLIDQ8IZY5 108 aa21.97■■□□□ 1.11
HOXA9-202ENST00000396345 FAM184AQ8NB25 1140 aa21.97■■□□□ 1.11
HOXA9-202ENST00000396345 DAGLBQ8NCG7 672 aa21.97■■□□□ 1.11
HOXA9-202ENST00000396345 U2AF1L4Q8WU68 220 aaKnown RBP21.97■■□□□ 1.11
HOXA9-202ENST00000396345 PGBD1Q96JS3 809 aa21.97■■□□□ 1.11
HOXA9-202ENST00000396345 POTEFA5A3E0 1075 aa21.96■■□□□ 1.11
HOXA9-202ENST00000396345 ADCYAP1R1P41586 468 aa21.96■■□□□ 1.11
HOXA9-202ENST00000396345 GJA8P48165 433 aa21.96■■□□□ 1.11
HOXA9-202ENST00000396345 FOSBP53539 338 aa21.96■■□□□ 1.11
HOXA9-202ENST00000396345 SOX10P56693 466 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms