RNA–Protein interactions for RNA: ENST00000395963.2

CCR9-203, Transcript of C-C motif chemokine receptor 9, humanhuman

TSL 1 (best) BASIC

Gene CCR9, Length 2,512 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9-203ENST00000395963 MBD3O95983 291 aa10.04□□□□□ -0.8
CCR9-203ENST00000395963 TAF1CQ15572 869 aaPredicted RBP10.04□□□□□ -0.8
CCR9-203ENST00000395963 Q4G0T1 1027 aa10.04□□□□□ -0.8
CCR9-203ENST00000395963 PCNX4Q63HM2 1172 aa10.04□□□□□ -0.8
CCR9-203ENST00000395963 CPXCR1Q8N123 301 aa10.04□□□□□ -0.8
CCR9-203ENST00000395963 LINC00301Q8NCQ3 95 aa10.04□□□□□ -0.8
CCR9-203ENST00000395963 A0A1W2PQ27 194 aa10.03□□□□□ -0.8
CCR9-203ENST00000395963 A0A1W2PQ64 194 aa10.03□□□□□ -0.8
CCR9-203ENST00000395963 A0A1W2PQD8 194 aa10.03□□□□□ -0.8
CCR9-203ENST00000395963 ATP2C1P98194 919 aaPredicted RBP10.03□□□□□ -0.8
CCR9-203ENST00000395963 SYTL5Q8TDW5 730 aaPredicted RBP10.03□□□□□ -0.8
CCR9-203ENST00000395963 NSUN6Q8TEA1 469 aaKnown RBP10.03□□□□□ -0.8
CCR9-203ENST00000395963 TBCKQ8TEA7 893 aa10.03□□□□□ -0.8
CCR9-203ENST00000395963 CDHR1Q96JP9 859 aa10.03□□□□□ -0.8
CCR9-203ENST00000395963 SPATA32Q96LK8 384 aa10.03□□□□□ -0.8
CCR9-203ENST00000395963 GZF1Q9H116 711 aaPredicted RBP10.03□□□□□ -0.8
CCR9-203ENST00000395963 GJB4Q9NTQ9 266 aa10.03□□□□□ -0.8
CCR9-203ENST00000395963 CYP39A1Q9NYL5 469 aa10.03□□□□□ -0.8
CCR9-203ENST00000395963 IGF2BP3O00425 579 aaKnown RBP eCLIP10.03□□□□□ -0.8
CCR9-203ENST00000395963 PPFIA3O75145 1194 aa10.03□□□□□ -0.8
CCR9-203ENST00000395963 CFBP00751 764 aa10.03□□□□□ -0.8
CCR9-203ENST00000395963 MCM4P33991 863 aa10.03□□□□□ -0.8
CCR9-203ENST00000395963 RPS6P62753 249 aaKnown RBP10.03□□□□□ -0.8
CCR9-203ENST00000395963 ARHGAP4P98171 946 aa10.03□□□□□ -0.8
CCR9-203ENST00000395963 DNM1Q05193 864 aaKnown RBP10.03□□□□□ -0.8
CCR9-203ENST00000395963 KCTD2Q14681 263 aa10.03□□□□□ -0.8
CCR9-203ENST00000395963 STK38Q15208 465 aa10.03□□□□□ -0.8
CCR9-203ENST00000395963 C17orf99Q6UX52 265 aa10.03□□□□□ -0.8
CCR9-203ENST00000395963 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.03□□□□□ -0.8
CCR9-203ENST00000395963 SLFN12Q8IYM2 578 aa10.03□□□□□ -0.8
CCR9-203ENST00000395963 MORC4Q8TE76 937 aa10.03□□□□□ -0.8
CCR9-203ENST00000395963 LEO1Q8WVC0 666 aaPredicted RBP10.03□□□□□ -0.8
CCR9-203ENST00000395963 SOCS4Q8WXH5 440 aa10.03□□□□□ -0.8
CCR9-203ENST00000395963 AK8Q96MA6 479 aa10.03□□□□□ -0.8
CCR9-203ENST00000395963 FAM20AQ96MK3 541 aa10.03□□□□□ -0.8
CCR9-203ENST00000395963 USP28Q96RU2 1077 aa10.03□□□□□ -0.8
CCR9-203ENST00000395963 RAB34Q9BZG1 259 aa10.03□□□□□ -0.8
CCR9-203ENST00000395963 BIN2Q9UBW5 565 aaPredicted RBP10.03□□□□□ -0.8
CCR9-203ENST00000395963 DNAJC25-GNG10A0A024R161 153 aa10.02□□□□□ -0.8
CCR9-203ENST00000395963 SLC15A5A6NIM6 579 aa10.02□□□□□ -0.8
CCR9-203ENST00000395963 SPTLC2O15270 562 aa10.02□□□□□ -0.8
CCR9-203ENST00000395963 CUTAO60888 179 aa10.02□□□□□ -0.8
CCR9-203ENST00000395963 GNRH1P01148 92 aa10.02□□□□□ -0.8
CCR9-203ENST00000395963 FCER1AP12319 257 aa10.02□□□□□ -0.8
CCR9-203ENST00000395963 TOB1P50616 345 aaPredicted RBP10.02□□□□□ -0.8
CCR9-203ENST00000395963 FOSBP53539 338 aa10.02□□□□□ -0.8
CCR9-203ENST00000395963 UBE2HP62256 183 aa10.02□□□□□ -0.8
CCR9-203ENST00000395963 ARHGEF6Q15052 776 aa10.02□□□□□ -0.8
CCR9-203ENST00000395963 PTPAQ15257 358 aa10.02□□□□□ -0.8
CCR9-203ENST00000395963 A1CFQ9NQ94 594 aaKnown RBP10.02□□□□□ -0.8
CCR9-203ENST00000395963 IVNS1ABPQ9Y6Y0 642 aa10.02□□□□□ -0.8
CCR9-203ENST00000395963 NFIBO00712 420 aa10.02□□□□□ -0.81
CCR9-203ENST00000395963 NEMFO60524 1076 aa10.02□□□□□ -0.81
CCR9-203ENST00000395963 ERCC3P19447 782 aa10.02□□□□□ -0.81
CCR9-203ENST00000395963 CCND2P30279 289 aa10.02□□□□□ -0.81
CCR9-203ENST00000395963 PLS1Q14651 629 aa10.02□□□□□ -0.81
CCR9-203ENST00000395963 SF3A1Q15459 793 aaKnown RBP10.02□□□□□ -0.81
CCR9-203ENST00000395963 MUM1L1Q5H9M0 696 aa10.02□□□□□ -0.81
CCR9-203ENST00000395963 JAKMIP3Q5VZ66 844 aa10.02□□□□□ -0.81
CCR9-203ENST00000395963 ADALQ6DHV7 355 aa10.02□□□□□ -0.81
CCR9-203ENST00000395963 KCNV1Q6PIU1 500 aa10.02□□□□□ -0.81
CCR9-203ENST00000395963 FAM133AQ8N9E0 248 aa10.02□□□□□ -0.81
CCR9-203ENST00000395963 MMP19Q99542 508 aa10.02□□□□□ -0.81
CCR9-203ENST00000395963 PAGR1Q9BTK6 254 aa10.02□□□□□ -0.81
CCR9-203ENST00000395963 SRPRBQ9Y5M8 271 aaKnown RBP10.02□□□□□ -0.81
CCR9-203ENST00000395963 PLXNB2O15031 1838 aa10.02□□□□□ -0.81
CCR9-203ENST00000395963 FAM237AA0A1B0GTK4 181 aa10.01□□□□□ -0.81
CCR9-203ENST00000395963 ASB14A6NK59 587 aa10.01□□□□□ -0.81
CCR9-203ENST00000395963 PTPREP23469 700 aa10.01□□□□□ -0.81
CCR9-203ENST00000395963 EDNRBP24530 442 aa10.01□□□□□ -0.81
CCR9-203ENST00000395963 LONP1P36776 959 aaKnown RBP10.01□□□□□ -0.81
CCR9-203ENST00000395963 SNAP25P60880 206 aa10.01□□□□□ -0.81
CCR9-203ENST00000395963 UBE2SQ16763 222 aa10.01□□□□□ -0.81
CCR9-203ENST00000395963 INF2Q27J81 1249 aa10.01□□□□□ -0.81
CCR9-203ENST00000395963 UTP14CQ5TAP6 766 aaKnown RBP10.01□□□□□ -0.81
CCR9-203ENST00000395963 USP17L6PQ6QN14 398 aa10.01□□□□□ -0.81
CCR9-203ENST00000395963 NCAPG2Q86XI2 1143 aa10.01□□□□□ -0.81
CCR9-203ENST00000395963 TRMT44Q8IYL2 757 aaKnown RBP10.01□□□□□ -0.81
CCR9-203ENST00000395963 ANKRD35Q8N283 1001 aa10.01□□□□□ -0.81
CCR9-203ENST00000395963 KRI1Q8N9T8 703 aaKnown RBP10.01□□□□□ -0.81
CCR9-203ENST00000395963 GPRASP2Q96D09 838 aa10.01□□□□□ -0.81
CCR9-203ENST00000395963 TRIM44Q96DX7 344 aaPredicted RBP10.01□□□□□ -0.81
CCR9-203ENST00000395963 PXMP2Q9NR77 195 aa10.01□□□□□ -0.81
CCR9-203ENST00000395963 RIPK3Q9Y572 518 aa10.01□□□□□ -0.81
CCR9-203ENST00000395963 POTEB2H3BUK9 544 aa10.01□□□□□ -0.81
CCR9-203ENST00000395963 HOXC6P09630 235 aa10.01□□□□□ -0.81
CCR9-203ENST00000395963 OR52Z1P0C646 297 aa10.01□□□□□ -0.81
CCR9-203ENST00000395963 CYP2C8P10632 490 aa10.01□□□□□ -0.81
CCR9-203ENST00000395963 GRB14Q14449 540 aa10.01□□□□□ -0.81
CCR9-203ENST00000395963 TMEM266Q2M3C6 531 aa10.01□□□□□ -0.81
CCR9-203ENST00000395963 GNPTABQ3T906 1256 aa10.01□□□□□ -0.81
CCR9-203ENST00000395963 CYP4F22Q6NT55 531 aa10.01□□□□□ -0.81
CCR9-203ENST00000395963 POTEEQ6S8J3 1075 aa10.01□□□□□ -0.81
CCR9-203ENST00000395963 PLEKHH3Q7Z736 793 aa10.01□□□□□ -0.81
CCR9-203ENST00000395963 NLRX1Q86UT6 975 aa10.01□□□□□ -0.81
CCR9-203ENST00000395963 CCAR1Q8IX12 1150 aaKnown RBP10.01□□□□□ -0.81
CCR9-203ENST00000395963 PDCD2LQ9BRP1 358 aa10.01□□□□□ -0.81
CCR9-203ENST00000395963 TXNRD2Q9NNW7 524 aa10.01□□□□□ -0.81
CCR9-203ENST00000395963 USP25Q9UHP3 1055 aa10.01□□□□□ -0.81
CCR9-203ENST00000395963 NRBP1Q9UHY1 535 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms