RNA–Protein interactions for RNA: ENST00000395722.7

PTPN20-206, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 1,995 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-206ENST00000395722 ADGRA2Q96PE1 1338 aa17.2■□□□□ 0.34
PTPN20-206ENST00000395722 A0A1W2PQ27 194 aa17.19■□□□□ 0.34
PTPN20-206ENST00000395722 A0A1W2PQ64 194 aa17.19■□□□□ 0.34
PTPN20-206ENST00000395722 A0A1W2PQD8 194 aa17.19■□□□□ 0.34
PTPN20-206ENST00000395722 CIITAP33076 1130 aa17.19■□□□□ 0.34
PTPN20-206ENST00000395722 Q3C1V9 767 aa17.19■□□□□ 0.34
PTPN20-206ENST00000395722 ARL6IP4Q66PJ3 421 aaKnown RBP17.19■□□□□ 0.34
PTPN20-206ENST00000395722 SHCBP1Q8NEM2 672 aa17.19■□□□□ 0.34
PTPN20-206ENST00000395722 EHMT1Q9H9B1 1298 aa17.19■□□□□ 0.34
PTPN20-206ENST00000395722 CREBZFQ9NS37 354 aa17.19■□□□□ 0.34
PTPN20-206ENST00000395722 SRPRBQ9Y5M8 271 aaKnown RBP17.19■□□□□ 0.34
PTPN20-206ENST00000395722 RASSF10A6NK89 507 aa17.19■□□□□ 0.34
PTPN20-206ENST00000395722 LAD1O00515 517 aa17.19■□□□□ 0.34
PTPN20-206ENST00000395722 TRAK2O60296 914 aa17.19■□□□□ 0.34
PTPN20-206ENST00000395722 CCNT1O60563 726 aaKnown RBP17.19■□□□□ 0.34
PTPN20-206ENST00000395722 TDP2O95551 362 aa17.19■□□□□ 0.34
PTPN20-206ENST00000395722 MBD3O95983 291 aa17.19■□□□□ 0.34
PTPN20-206ENST00000395722 APLP1P51693 650 aa17.19■□□□□ 0.34
PTPN20-206ENST00000395722 ERVK-9P63128 1117 aa17.19■□□□□ 0.34
PTPN20-206ENST00000395722 ERVK-24P63145 666 aa17.19■□□□□ 0.34
PTPN20-206ENST00000395722 KLHL40Q2TBA0 621 aa17.19■□□□□ 0.34
PTPN20-206ENST00000395722 KRI1Q8N9T8 703 aaKnown RBP17.19■□□□□ 0.34
PTPN20-206ENST00000395722 SMCR8Q8TEV9 937 aaPredicted RBP17.19■□□□□ 0.34
PTPN20-206ENST00000395722 TMEM60Q9H2L4 133 aa17.19■□□□□ 0.34
PTPN20-206ENST00000395722 A1CFQ9NQ94 594 aaKnown RBP17.19■□□□□ 0.34
PTPN20-206ENST00000395722 CYP39A1Q9NYL5 469 aa17.19■□□□□ 0.34
PTPN20-206ENST00000395722 MRVI1Q9Y6F6 885 aa17.19■□□□□ 0.34
PTPN20-206ENST00000395722 LCTP09848 1927 aa17.18■□□□□ 0.34
PTPN20-206ENST00000395722 CUTAO60888 179 aa17.18■□□□□ 0.34
PTPN20-206ENST00000395722 PRPHP41219 470 aa17.18■□□□□ 0.34
PTPN20-206ENST00000395722 BAATQ14032 418 aaPredicted RBP17.18■□□□□ 0.34
PTPN20-206ENST00000395722 NSMFQ6X4W1 530 aa17.18■□□□□ 0.34
PTPN20-206ENST00000395722 FERMT2Q96AC1 680 aa17.18■□□□□ 0.34
PTPN20-206ENST00000395722 ERCC3P19447 782 aa17.17■□□□□ 0.34
PTPN20-206ENST00000395722 TM4SF4P48230 202 aa17.17■□□□□ 0.34
PTPN20-206ENST00000395722 IFNL1Q8IU54 200 aa17.17■□□□□ 0.34
PTPN20-206ENST00000395722 ZNF579Q8NAF0 562 aaKnown RBP17.17■□□□□ 0.34
PTPN20-206ENST00000395722 SLC37A4O43826 429 aa17.17■□□□□ 0.34
PTPN20-206ENST00000395722 NEMFO60524 1076 aa17.17■□□□□ 0.34
PTPN20-206ENST00000395722 SREBF2Q12772 1141 aa17.17■□□□□ 0.34
PTPN20-206ENST00000395722 GPRC5AQ8NFJ5 357 aa17.17■□□□□ 0.34
PTPN20-206ENST00000395722 MTMR9Q96QG7 549 aa17.17■□□□□ 0.34
PTPN20-206ENST00000395722 TAAR1Q96RJ0 339 aa17.17■□□□□ 0.34
PTPN20-206ENST00000395722 MROH8Q9H579 483 aa17.17■□□□□ 0.34
PTPN20-206ENST00000395722 DDX49Q9Y6V7 483 aaKnown RBP17.17■□□□□ 0.34
PTPN20-206ENST00000395722 PFASO15067 1338 aa17.16■□□□□ 0.34
PTPN20-206ENST00000395722 FAM237AA0A1B0GTK4 181 aa17.16■□□□□ 0.34
PTPN20-206ENST00000395722 GOLGA6L4A6NEF3 574 aa17.16■□□□□ 0.34
PTPN20-206ENST00000395722 IL17AQ16552 155 aa17.16■□□□□ 0.34
PTPN20-206ENST00000395722 Q4G0T1 1027 aa17.16■□□□□ 0.34
PTPN20-206ENST00000395722 NCAPG2Q86XI2 1143 aa17.16■□□□□ 0.34
PTPN20-206ENST00000395722 POTEDQ86YR6 584 aa17.16■□□□□ 0.34
PTPN20-206ENST00000395722 LENG9Q96B70 501 aa17.16■□□□□ 0.34
PTPN20-206ENST00000395722 R3HDMLQ9H3Y0 253 aa17.16■□□□□ 0.34
PTPN20-206ENST00000395722 DDX25Q9UHL0 483 aaKnown RBP17.16■□□□□ 0.34
PTPN20-206ENST00000395722 OR52Z1P0C646 297 aa17.15■□□□□ 0.34
PTPN20-206ENST00000395722 CMA1P23946 247 aa17.15■□□□□ 0.34
PTPN20-206ENST00000395722 GRIN1Q05586 938 aa17.15■□□□□ 0.34
PTPN20-206ENST00000395722 FAM110CQ1W6H9 321 aa17.15■□□□□ 0.34
PTPN20-206ENST00000395722 CYP4F22Q6NT55 531 aa17.15■□□□□ 0.34
PTPN20-206ENST00000395722 SHC4Q6S5L8 630 aa17.15■□□□□ 0.34
PTPN20-206ENST00000395722 CLIC6Q96NY7 704 aa17.15■□□□□ 0.34
PTPN20-206ENST00000395722 ZIC5Q96T25 663 aa17.15■□□□□ 0.34
PTPN20-206ENST00000395722 IGLV3-22A0A075B6J6 115 aa17.15■□□□□ 0.34
PTPN20-206ENST00000395722 FAM86B1E9PN63 330 aa17.15■□□□□ 0.34
PTPN20-206ENST00000395722 FAM86B2P0C5J1 330 aa17.15■□□□□ 0.34
PTPN20-206ENST00000395722 CCNA1P78396 465 aa17.15■□□□□ 0.34
PTPN20-206ENST00000395722 RESP18Q5W5W9 173 aa17.15■□□□□ 0.34
PTPN20-206ENST00000395722 ANKRD13CQ8N6S4 541 aa17.15■□□□□ 0.34
PTPN20-206ENST00000395722 RMDN3Q96TC7 470 aa17.15■□□□□ 0.34
PTPN20-206ENST00000395722 GOLPH3LQ9H4A5 285 aa17.15■□□□□ 0.34
PTPN20-206ENST00000395722 KCNMB3Q9NPA1 279 aa17.15■□□□□ 0.34
PTPN20-206ENST00000395722 PXMP2Q9NR77 195 aa17.15■□□□□ 0.34
PTPN20-206ENST00000395722 BCRP11274 1271 aa17.14■□□□□ 0.33
PTPN20-206ENST00000395722 LIG1P18858 919 aa17.14■□□□□ 0.33
PTPN20-206ENST00000395722 NOGQ13253 232 aa17.14■□□□□ 0.33
PTPN20-206ENST00000395722 DEFB115Q30KQ5 88 aa17.14■□□□□ 0.33
PTPN20-206ENST00000395722 PCNX4Q63HM2 1172 aa17.14■□□□□ 0.33
PTPN20-206ENST00000395722 XRRA1Q6P2D8 792 aa17.14■□□□□ 0.33
PTPN20-206ENST00000395722 CCAR1Q8IX12 1150 aaKnown RBP17.14■□□□□ 0.33
PTPN20-206ENST00000395722 IL31RAQ8NI17 732 aa17.14■□□□□ 0.33
PTPN20-206ENST00000395722 MRPS27Q92552 414 aaKnown RBP17.14■□□□□ 0.33
PTPN20-206ENST00000395722 PDCD2LQ9BRP1 358 aa17.14■□□□□ 0.33
PTPN20-206ENST00000395722 PORCNQ9H237 461 aa17.14■□□□□ 0.33
PTPN20-206ENST00000395722 PGM5Q15124 567 aa17.13■□□□□ 0.33
PTPN20-206ENST00000395722 TAF1CQ15572 869 aaPredicted RBP17.13■□□□□ 0.33
PTPN20-206ENST00000395722 CALCRLQ16602 461 aa17.13■□□□□ 0.33
PTPN20-206ENST00000395722 ANKRD35Q8N283 1001 aa17.13■□□□□ 0.33
PTPN20-206ENST00000395722 FSIP1Q8NA03 581 aa17.13■□□□□ 0.33
PTPN20-206ENST00000395722 ENGASEQ8NFI3 743 aa17.13■□□□□ 0.33
PTPN20-206ENST00000395722 HAS1Q92839 578 aa17.13■□□□□ 0.33
PTPN20-206ENST00000395722 PURBQ96QR8 312 aaKnown RBP17.13■□□□□ 0.33
PTPN20-206ENST00000395722 CSRNP2Q9H175 543 aa17.13■□□□□ 0.33
PTPN20-206ENST00000395722 HPSEQ9Y251 543 aa17.13■□□□□ 0.33
PTPN20-206ENST00000395722 DNAJC25-GNG10A0A024R161 153 aa17.13■□□□□ 0.33
PTPN20-206ENST00000395722 TBX3O15119 743 aa17.13■□□□□ 0.33
PTPN20-206ENST00000395722 UBXN2AP68543 259 aa17.13■□□□□ 0.33
PTPN20-206ENST00000395722 NIPA1Q7RTP0 329 aa17.13■□□□□ 0.33
PTPN20-206ENST00000395722 FAM133AQ8N9E0 248 aa17.13■□□□□ 0.33
PTPN20-206ENST00000395722 DNERQ8NFT8 737 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms