RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 PTPDC1A2A3K4 754 aa18.71■□□□□ 0.59
SNCA-205ENST00000394991 LCHNA4D1U4 455 aa18.71■□□□□ 0.59
SNCA-205ENST00000394991 RBAK-RBAKDNI3L0D1 243 aa18.71■□□□□ 0.59
SNCA-205ENST00000394991 TMEM31Q5JXX7 168 aa18.71■□□□□ 0.59
SNCA-205ENST00000394991 SYDE2Q5VT97 1194 aa18.71■□□□□ 0.59
SNCA-205ENST00000394991 TMCO2Q7Z6W1 182 aaPredicted RBP18.71■□□□□ 0.59
SNCA-205ENST00000394991 RETREG2Q8NC44 543 aa18.71■□□□□ 0.59
SNCA-205ENST00000394991 DCAF4Q8WV16 495 aa18.71■□□□□ 0.59
SNCA-205ENST00000394991 CTAGE1Q96RT6 745 aa18.71■□□□□ 0.59
SNCA-205ENST00000394991 DCTPP1Q9H773 170 aa18.71■□□□□ 0.59
SNCA-205ENST00000394991 A6NJR5 290 aa18.7■□□□□ 0.58
SNCA-205ENST00000394991 EDNRBP24530 442 aa18.7■□□□□ 0.58
SNCA-205ENST00000394991 CALML3P27482 149 aa18.7■□□□□ 0.58
SNCA-205ENST00000394991 GPNMBQ14956 572 aa18.7■□□□□ 0.58
SNCA-205ENST00000394991 PPP2R5BQ15173 497 aa18.7■□□□□ 0.58
SNCA-205ENST00000394991 PI4K2BQ8TCG2 481 aa18.7■□□□□ 0.58
SNCA-205ENST00000394991 GDPD5Q8WTR4 605 aa18.7■□□□□ 0.58
SNCA-205ENST00000394991 CD320Q9NPF0 282 aa18.7■□□□□ 0.58
SNCA-205ENST00000394991 FRMPD2Q68DX3 1309 aaPredicted RBP18.7■□□□□ 0.58
SNCA-205ENST00000394991 FAM86C2PA6NEL3 165 aa18.69■□□□□ 0.58
SNCA-205ENST00000394991 KIF28PB7ZC32 967 aa18.69■□□□□ 0.58
SNCA-205ENST00000394991 NKRFO15226 690 aaKnown RBP eCLIP18.69■□□□□ 0.58
SNCA-205ENST00000394991 RANBP6O60518 1105 aaKnown RBP18.69■□□□□ 0.58
SNCA-205ENST00000394991 BAIAP3O94812 1187 aa18.69■□□□□ 0.58
SNCA-205ENST00000394991 ARIH2O95376 493 aa18.69■□□□□ 0.58
SNCA-205ENST00000394991 WDR5P61964 334 aaKnown RBP18.69■□□□□ 0.58
SNCA-205ENST00000394991 PTPN11Q06124 597 aaPredicted RBP18.69■□□□□ 0.58
SNCA-205ENST00000394991 BFSP2Q13515 415 aa18.69■□□□□ 0.58
SNCA-205ENST00000394991 LRRFIP1Q32MZ4 808 aaKnown RBP18.69■□□□□ 0.58
SNCA-205ENST00000394991 FSD1Q9BTV5 496 aa18.69■□□□□ 0.58
SNCA-205ENST00000394991 RAD50Q92878 1312 aa18.69■□□□□ 0.58
SNCA-205ENST00000394991 MYH7BA7E2Y1 1941 aa18.68■□□□□ 0.58
SNCA-205ENST00000394991 MYH6P13533 1939 aa18.68■□□□□ 0.58
SNCA-205ENST00000394991 KPNA6O60684 536 aa18.68■□□□□ 0.58
SNCA-205ENST00000394991 DEFB103AP81534 67 aa18.68■□□□□ 0.58
SNCA-205ENST00000394991 PDE4DQ08499 809 aa18.68■□□□□ 0.58
SNCA-205ENST00000394991 BRDTQ58F21 947 aaPredicted RBP18.68■□□□□ 0.58
SNCA-205ENST00000394991 RNF207Q6ZRF8 634 aa18.68■□□□□ 0.58
SNCA-205ENST00000394991 OTUD7AQ8TE49 926 aaPredicted RBP18.68■□□□□ 0.58
SNCA-205ENST00000394991 SCFD2Q8WU76 684 aa18.68■□□□□ 0.58
SNCA-205ENST00000394991 GPCPD1Q9NPB8 672 aa18.68■□□□□ 0.58
SNCA-205ENST00000394991 ORC4O43929 436 aa18.67■□□□□ 0.58
SNCA-205ENST00000394991 GPR37L1O60883 481 aa18.67■□□□□ 0.58
SNCA-205ENST00000394991 KCNJ6P48051 423 aa18.67■□□□□ 0.58
SNCA-205ENST00000394991 RPS6P62753 249 aaKnown RBP18.67■□□□□ 0.58
SNCA-205ENST00000394991 TCTN1Q2MV58 587 aa18.67■□□□□ 0.58
SNCA-205ENST00000394991 VPS53Q5VIR6 699 aa18.67■□□□□ 0.58
SNCA-205ENST00000394991 DHX38Q92620 1227 aaKnown RBP18.67■□□□□ 0.58
SNCA-205ENST00000394991 ANAPC4Q9UJX5 808 aa18.67■□□□□ 0.58
SNCA-205ENST00000394991 NOD1Q9Y239 953 aa18.67■□□□□ 0.58
SNCA-205ENST00000394991 MICAL3Q7RTP6 2002 aa18.67■□□□□ 0.58
SNCA-205ENST00000394991 TTC41PQ6P2S7 1318 aa18.67■□□□□ 0.58
SNCA-205ENST00000394991 TXNP10599 105 aaKnown RBP18.66■□□□□ 0.58
SNCA-205ENST00000394991 CHMP4BP1P59074 171 aa18.66■□□□□ 0.58
SNCA-205ENST00000394991 PTGISQ16647 500 aa18.66■□□□□ 0.58
SNCA-205ENST00000394991 GDF6Q6KF10 455 aaPredicted RBP18.66■□□□□ 0.58
SNCA-205ENST00000394991 AFAP1L1Q8TED9 768 aa18.66■□□□□ 0.58
SNCA-205ENST00000394991 TMEM47Q9BQJ4 181 aa18.66■□□□□ 0.58
SNCA-205ENST00000394991 FGRP09769 529 aa18.65■□□□□ 0.58
SNCA-205ENST00000394991 TOP1P11387 765 aaKnown RBP18.65■□□□□ 0.58
SNCA-205ENST00000394991 DNERQ8NFT8 737 aa18.65■□□□□ 0.58
SNCA-205ENST00000394991 CAGE1Q8TC20 777 aa18.65■□□□□ 0.58
SNCA-205ENST00000394991 LMCD1Q9NZU5 365 aa18.65■□□□□ 0.58
SNCA-205ENST00000394991 PI4K2BG5E9Z4 385 aa18.64■□□□□ 0.57
SNCA-205ENST00000394991 MMP3P08254 477 aa18.64■□□□□ 0.57
SNCA-205ENST00000394991 PDHBP11177 359 aa18.64■□□□□ 0.57
SNCA-205ENST00000394991 SELPP16109 830 aa18.64■□□□□ 0.57
SNCA-205ENST00000394991 CCDC62Q6P9F0 684 aa18.64■□□□□ 0.57
SNCA-205ENST00000394991 LRRC8DQ7L1W4 858 aa18.64■□□□□ 0.57
SNCA-205ENST00000394991 SESTD1Q86VW0 696 aa18.64■□□□□ 0.57
SNCA-205ENST00000394991 CCDC155Q8N6L0 562 aa18.64■□□□□ 0.57
SNCA-205ENST00000394991 AFG1LQ8WV93 481 aa18.64■□□□□ 0.57
SNCA-205ENST00000394991 KAT2BQ92831 832 aa18.64■□□□□ 0.57
SNCA-205ENST00000394991 UBE2ZQ9H832 354 aaPredicted RBP18.64■□□□□ 0.57
SNCA-205ENST00000394991 SUGCTQ9HAC7 445 aa18.64■□□□□ 0.57
SNCA-205ENST00000394991 RCAN3Q9UKA8 241 aa18.64■□□□□ 0.57
SNCA-205ENST00000394991 MTUS1Q9ULD2 1270 aa18.64■□□□□ 0.57
SNCA-205ENST00000394991 WDR19Q8NEZ3 1342 aa18.64■□□□□ 0.57
SNCA-205ENST00000394991 ATG2AQ2TAZ0 1938 aa18.63■□□□□ 0.57
SNCA-205ENST00000394991 NBNO60934 754 aa18.63■□□□□ 0.57
SNCA-205ENST00000394991 CXCL10P02778 98 aa18.63■□□□□ 0.57
SNCA-205ENST00000394991 ERVK-21P61565 698 aa18.63■□□□□ 0.57
SNCA-205ENST00000394991 RBL2Q08999 1139 aa18.63■□□□□ 0.57
SNCA-205ENST00000394991 CNKSR3Q6P9H4 555 aa18.63■□□□□ 0.57
SNCA-205ENST00000394991 ZBED2Q9BTP6 218 aa18.63■□□□□ 0.57
SNCA-205ENST00000394991 NLRC5Q86WI3 1866 aa18.63■□□□□ 0.57
SNCA-205ENST00000394991 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.62■□□□□ 0.57
SNCA-205ENST00000394991 LINC01553A4QN01 128 aa18.62■□□□□ 0.57
SNCA-205ENST00000394991 GJB5O95377 273 aa18.62■□□□□ 0.57
SNCA-205ENST00000394991 ARHGAP1Q07960 439 aa18.62■□□□□ 0.57
SNCA-205ENST00000394991 ZNF543Q08ER8 600 aa18.62■□□□□ 0.57
SNCA-205ENST00000394991 RRP12Q5JTH9 1297 aaKnown RBP18.62■□□□□ 0.57
SNCA-205ENST00000394991 MPHOSPH6Q99547 160 aaKnown RBP18.62■□□□□ 0.57
SNCA-205ENST00000394991 CKBP12277 381 aa18.61■□□□□ 0.57
SNCA-205ENST00000394991 LY6KQ17RY6 165 aa18.61■□□□□ 0.57
SNCA-205ENST00000394991 TRAF7Q6Q0C0 670 aa18.61■□□□□ 0.57
SNCA-205ENST00000394991 TGS1Q96RS0 853 aaKnown RBP18.61■□□□□ 0.57
SNCA-205ENST00000394991 TOMM22Q9NS69 142 aa18.61■□□□□ 0.57
SNCA-205ENST00000394991 TCP11L1Q9NUJ3 509 aa18.61■□□□□ 0.57
SNCA-205ENST00000394991 MYO7AQ13402 2215 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms