RNA–Protein interactions for RNA: ENST00000394803.9

UBE2D3-208, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-208ENST00000394803 NAV1Q8NEY1 1877 aa11.15□□□□□ -0.62
UBE2D3-208ENST00000394803 SLC26A4O43511 780 aa11.15□□□□□ -0.63
UBE2D3-208ENST00000394803 CCNT1O60563 726 aaKnown RBP11.15□□□□□ -0.63
UBE2D3-208ENST00000394803 GGCXP38435 758 aa11.15□□□□□ -0.63
UBE2D3-208ENST00000394803 TXNRD1Q16881 649 aa11.15□□□□□ -0.63
UBE2D3-208ENST00000394803 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.15□□□□□ -0.63
UBE2D3-208ENST00000394803 CAVIN3Q969G5 261 aa11.15□□□□□ -0.63
UBE2D3-208ENST00000394803 EBAG9O00559 213 aa11.14□□□□□ -0.63
UBE2D3-208ENST00000394803 SRGAP2O75044 1071 aa11.14□□□□□ -0.63
UBE2D3-208ENST00000394803 GNA14O95837 355 aa11.14□□□□□ -0.63
UBE2D3-208ENST00000394803 LDHBP07195 334 aaKnown RBP11.14□□□□□ -0.63
UBE2D3-208ENST00000394803 FXR2P51116 673 aaKnown RBP eCLIP11.14□□□□□ -0.63
UBE2D3-208ENST00000394803 PPP4CP60510 307 aa11.14□□□□□ -0.63
UBE2D3-208ENST00000394803 MAPK8IP2Q13387 824 aaPredicted RBP11.14□□□□□ -0.63
UBE2D3-208ENST00000394803 CFAP221Q4G0U5 840 aa11.14□□□□□ -0.63
UBE2D3-208ENST00000394803 CACNA2D4Q7Z3S7 1137 aa11.14□□□□□ -0.63
UBE2D3-208ENST00000394803 C2CD5Q86YS7 1000 aa11.14□□□□□ -0.63
UBE2D3-208ENST00000394803 IFT20Q8IY31 132 aa11.14□□□□□ -0.63
UBE2D3-208ENST00000394803 RASGRP4Q8TDF6 673 aa11.14□□□□□ -0.63
UBE2D3-208ENST00000394803 OSBPL9Q96SU4 736 aa11.14□□□□□ -0.63
UBE2D3-208ENST00000394803 NAP1L4Q99733 375 aaKnown RBP11.14□□□□□ -0.63
UBE2D3-208ENST00000394803 LACRTQ9GZZ8 138 aa11.14□□□□□ -0.63
UBE2D3-208ENST00000394803 RNF216Q9NWF9 866 aaPredicted RBP11.14□□□□□ -0.63
UBE2D3-208ENST00000394803 STIM2Q9P246 746 aa11.14□□□□□ -0.63
UBE2D3-208ENST00000394803 A0A087WUV0 522 aaPredicted RBP11.13□□□□□ -0.63
UBE2D3-208ENST00000394803 GRID2IPA4D2P6 1211 aa11.13□□□□□ -0.63
UBE2D3-208ENST00000394803 SMCO2A6NFE2 343 aa11.13□□□□□ -0.63
UBE2D3-208ENST00000394803 PP2D1A8MPX8 630 aa11.13□□□□□ -0.63
UBE2D3-208ENST00000394803 KLRF2D3W0D1 207 aa11.13□□□□□ -0.63
UBE2D3-208ENST00000394803 SMIM22K7EJ46 135 aa11.13□□□□□ -0.63
UBE2D3-208ENST00000394803 PLCG2P16885 1265 aa11.13□□□□□ -0.63
UBE2D3-208ENST00000394803 MAGEA1P43355 309 aa11.13□□□□□ -0.63
UBE2D3-208ENST00000394803 PDIA5Q14554 519 aa11.13□□□□□ -0.63
UBE2D3-208ENST00000394803 LETM2Q2VYF4 491 aa11.13□□□□□ -0.63
UBE2D3-208ENST00000394803 C8orf74Q6P047 294 aa11.13□□□□□ -0.63
UBE2D3-208ENST00000394803 CREG2Q8IUH2 290 aa11.13□□□□□ -0.63
UBE2D3-208ENST00000394803 STAG2Q8N3U4 1231 aa11.13□□□□□ -0.63
UBE2D3-208ENST00000394803 SPATA4Q8NEY3 305 aa11.13□□□□□ -0.63
UBE2D3-208ENST00000394803 CAPS2Q9BXY5 557 aa11.13□□□□□ -0.63
UBE2D3-208ENST00000394803 IL17RBQ9NRM6 502 aa11.13□□□□□ -0.63
UBE2D3-208ENST00000394803 SIK3Q9Y2K2 1263 aa11.13□□□□□ -0.63
UBE2D3-208ENST00000394803 TFRCP02786 760 aaKnown RBP11.13□□□□□ -0.63
UBE2D3-208ENST00000394803 CYP2D6P10635 497 aa11.13□□□□□ -0.63
UBE2D3-208ENST00000394803 C2orf54Q08AI8 447 aa11.13□□□□□ -0.63
UBE2D3-208ENST00000394803 STK4Q13043 487 aa11.13□□□□□ -0.63
UBE2D3-208ENST00000394803 ITPK1Q13572 414 aa11.13□□□□□ -0.63
UBE2D3-208ENST00000394803 SLC9C1Q4G0N8 1177 aa11.13□□□□□ -0.63
UBE2D3-208ENST00000394803 TYW1BQ6NUM6 668 aa11.13□□□□□ -0.63
UBE2D3-208ENST00000394803 POTEDQ86YR6 584 aa11.13□□□□□ -0.63
UBE2D3-208ENST00000394803 REXO1Q8N1G1 1221 aaKnown RBP11.13□□□□□ -0.63
UBE2D3-208ENST00000394803 LARP4BQ92615 738 aaKnown RBP11.13□□□□□ -0.63
UBE2D3-208ENST00000394803 SH3GL2Q99962 352 aa11.13□□□□□ -0.63
UBE2D3-208ENST00000394803 STX8Q9UNK0 236 aa11.13□□□□□ -0.63
UBE2D3-208ENST00000394803 ZC3H4Q9UPT8 1303 aaKnown RBP11.13□□□□□ -0.63
UBE2D3-208ENST00000394803 MYH14Q7Z406 1995 aaKnown RBP11.12□□□□□ -0.63
UBE2D3-208ENST00000394803 A0A0G2JS52 829 aa11.12□□□□□ -0.63
UBE2D3-208ENST00000394803 CPP00450 1065 aa11.12□□□□□ -0.63
UBE2D3-208ENST00000394803 USP17L8P0C7I0 530 aa11.12□□□□□ -0.63
UBE2D3-208ENST00000394803 PRDX5P30044 214 aa11.12□□□□□ -0.63
UBE2D3-208ENST00000394803 PAK2Q13177 524 aa11.12□□□□□ -0.63
UBE2D3-208ENST00000394803 KRT79Q5XKE5 535 aa11.12□□□□□ -0.63
UBE2D3-208ENST00000394803 PPP1R18Q6NYC8 613 aa11.12□□□□□ -0.63
UBE2D3-208ENST00000394803 SND1Q7KZF4 910 aaKnown RBP eCLIP11.12□□□□□ -0.633e-6■□□□□ 8.1
UBE2D3-208ENST00000394803 SLF2Q8IX21 1173 aa11.12□□□□□ -0.63
UBE2D3-208ENST00000394803 TMEM47Q9BQJ4 181 aa11.12□□□□□ -0.63
UBE2D3-208ENST00000394803 MMRN2Q9H8L6 949 aa11.12□□□□□ -0.63
UBE2D3-208ENST00000394803 BMP2KQ9NSY1 1161 aaPredicted RBP11.12□□□□□ -0.63
UBE2D3-208ENST00000394803 CEP72Q9P209 647 aa11.12□□□□□ -0.63
UBE2D3-208ENST00000394803 ATXN2Q99700 1313 aaKnown RBP11.12□□□□□ -0.63
UBE2D3-208ENST00000394803 TNRC6CQ9HCJ0 1690 aaKnown RBP11.12□□□□□ -0.63
UBE2D3-208ENST00000394803 RCCD1A6NED2 376 aa11.12□□□□□ -0.63
UBE2D3-208ENST00000394803 RASSF10A6NK89 507 aa11.12□□□□□ -0.63
UBE2D3-208ENST00000394803 RBAK-RBAKDNI3L0D1 243 aa11.12□□□□□ -0.63
UBE2D3-208ENST00000394803 EIF4A3P38919 411 aaKnown RBP11.12□□□□□ -0.63
UBE2D3-208ENST00000394803 USP8P40818 1118 aa11.12□□□□□ -0.63
UBE2D3-208ENST00000394803 CYP27A1Q02318 531 aa11.12□□□□□ -0.63
UBE2D3-208ENST00000394803 CALCRLQ16602 461 aa11.12□□□□□ -0.63
UBE2D3-208ENST00000394803 C10orf76Q5T2E6 689 aa11.12□□□□□ -0.63
UBE2D3-208ENST00000394803 B4GALNT4Q76KP1 1039 aa11.12□□□□□ -0.63
UBE2D3-208ENST00000394803 EIF1ADQ8N9N8 165 aaKnown RBP11.12□□□□□ -0.63
UBE2D3-208ENST00000394803 CELF1Q92879 486 aaKnown RBP11.12□□□□□ -0.63
UBE2D3-208ENST00000394803 PLIN2Q99541 437 aa11.12□□□□□ -0.63
UBE2D3-208ENST00000394803 ARHGAP20Q9P2F6 1191 aa11.12□□□□□ -0.63
UBE2D3-208ENST00000394803 LCMT1Q9UIC8 334 aa11.12□□□□□ -0.63
UBE2D3-208ENST00000394803 LEMD3Q9Y2U8 911 aa11.12□□□□□ -0.63
UBE2D3-208ENST00000394803 SERPING1P05155 500 aa11.11□□□□□ -0.63
UBE2D3-208ENST00000394803 VEGFAP15692 232 aaPredicted RBP11.11□□□□□ -0.63
UBE2D3-208ENST00000394803 TECP42680 631 aa11.11□□□□□ -0.63
UBE2D3-208ENST00000394803 SKOR1P84550 965 aa11.11□□□□□ -0.63
UBE2D3-208ENST00000394803 IFI16Q16666 785 aaKnown RBP11.11□□□□□ -0.63
UBE2D3-208ENST00000394803 PDXDC1Q6P996 788 aa11.11□□□□□ -0.63
UBE2D3-208ENST00000394803 MICALCLQ6ZW33 695 aa11.11□□□□□ -0.63
UBE2D3-208ENST00000394803 ZNF804AQ7Z570 1209 aa11.11□□□□□ -0.63
UBE2D3-208ENST00000394803 KIAA0895Q8NCT3 520 aa11.11□□□□□ -0.63
UBE2D3-208ENST00000394803 C1orf131Q8NDD1 294 aaKnown RBP11.11□□□□□ -0.63
UBE2D3-208ENST00000394803 CEP63Q96MT8 703 aa11.11□□□□□ -0.63
UBE2D3-208ENST00000394803 CNTNAP4Q9C0A0 1308 aa11.11□□□□□ -0.63
UBE2D3-208ENST00000394803 KDM3AQ9Y4C1 1321 aa11.11□□□□□ -0.63
UBE2D3-208ENST00000394803 COL16A1Q07092 1604 aaPredicted RBP11.11□□□□□ -0.63
UBE2D3-208ENST00000394803 PDE2AO00408 941 aaPredicted RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms