RNA–Protein interactions for RNA: ENST00000394555.6

EFEMP1-202, Transcript of EGF containing fibulin extracellular matrix protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFEMP1, Length 3,024 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFEMP1-202ENST00000394555 COL18A1P39060 1754 aa18.17■□□□□ 0.5
EFEMP1-202ENST00000394555 A0A1W2PQJ5 194 aa18.17■□□□□ 0.5
EFEMP1-202ENST00000394555 PAK2Q13177 524 aa18.17■□□□□ 0.5
EFEMP1-202ENST00000394555 SF3B2Q13435 895 aaKnown RBP18.17■□□□□ 0.5
EFEMP1-202ENST00000394555 PTGISQ16647 500 aa18.17■□□□□ 0.5
EFEMP1-202ENST00000394555 CEP85LQ5SZL2 805 aa18.17■□□□□ 0.5
EFEMP1-202ENST00000394555 KLHDC7AQ5VTJ3 777 aa18.17■□□□□ 0.5
EFEMP1-202ENST00000394555 CACNA2D4Q7Z3S7 1137 aa18.17■□□□□ 0.5
EFEMP1-202ENST00000394555 CABP7Q86V35 215 aa18.17■□□□□ 0.5
EFEMP1-202ENST00000394555 NLRP14Q86W24 1093 aa18.17■□□□□ 0.5
EFEMP1-202ENST00000394555 DZIP3Q86Y13 1208 aaKnown RBP18.17■□□□□ 0.5
EFEMP1-202ENST00000394555 TRIM9Q9C026 710 aa18.17■□□□□ 0.5
EFEMP1-202ENST00000394555 NLRC4Q9NPP4 1024 aa18.17■□□□□ 0.5
EFEMP1-202ENST00000394555 PCDHA4Q9UN74 947 aa18.17■□□□□ 0.5
EFEMP1-202ENST00000394555 TSPY2A6NKD2 308 aa18.17■□□□□ 0.5
EFEMP1-202ENST00000394555 FSBPO95073 299 aa18.17■□□□□ 0.5
EFEMP1-202ENST00000394555 RDXP35241 583 aaKnown RBP18.17■□□□□ 0.5
EFEMP1-202ENST00000394555 TXNRD1Q16881 649 aa18.17■□□□□ 0.5
EFEMP1-202ENST00000394555 VWA3BQ502W6 1294 aa18.17■□□□□ 0.5
EFEMP1-202ENST00000394555 RUBCNQ92622 972 aa18.17■□□□□ 0.5
EFEMP1-202ENST00000394555 HEATR3Q7Z4Q2 680 aa18.16■□□□□ 0.5
EFEMP1-202ENST00000394555 KLHL7Q8IXQ5 586 aa18.16■□□□□ 0.5
EFEMP1-202ENST00000394555 SEMA6BQ9H3T3 888 aa18.16■□□□□ 0.5
EFEMP1-202ENST00000394555 TCP11L1Q9NUJ3 509 aa18.16■□□□□ 0.5
EFEMP1-202ENST00000394555 BAZ2AQ9UIF9 1905 aaKnown RBP18.16■□□□□ 0.5
EFEMP1-202ENST00000394555 SSBP05455 408 aaKnown RBP eCLIP18.16■□□□□ 0.5
EFEMP1-202ENST00000394555 CYP2D6P10635 497 aa18.16■□□□□ 0.5
EFEMP1-202ENST00000394555 IGHMBP2P38935 993 aaKnown RBP18.16■□□□□ 0.5
EFEMP1-202ENST00000394555 HLTFQ14527 1009 aaKnown RBP eCLIP18.16■□□□□ 0.5
EFEMP1-202ENST00000394555 ZSCAN29Q8IWY8 852 aaPredicted RBP18.16■□□□□ 0.5
EFEMP1-202ENST00000394555 STAG2Q8N3U4 1231 aa18.16■□□□□ 0.5
EFEMP1-202ENST00000394555 MYCBPAPQ8TBZ2 947 aa18.16■□□□□ 0.5
EFEMP1-202ENST00000394555 CHRNDQ07001 517 aa18.15■□□□□ 0.5
EFEMP1-202ENST00000394555 FIGNQ5HY92 759 aa18.15■□□□□ 0.5
EFEMP1-202ENST00000394555 CASKIN2Q8WXE0 1202 aa18.15■□□□□ 0.5
EFEMP1-202ENST00000394555 PIK3R5Q8WYR1 880 aa18.15■□□□□ 0.5
EFEMP1-202ENST00000394555 BCCIPQ9P287 314 aaKnown RBP eCLIP18.15■□□□□ 0.5
EFEMP1-202ENST00000394555 UBR2Q8IWV8 1755 aa18.15■□□□□ 0.5
EFEMP1-202ENST00000394555 CCDC172P0C7W6 258 aa18.15■□□□□ 0.5
EFEMP1-202ENST00000394555 MDH1P40925 334 aaKnown RBP18.15■□□□□ 0.5
EFEMP1-202ENST00000394555 ARID5AQ03989 594 aa18.15■□□□□ 0.5
EFEMP1-202ENST00000394555 PROCA1Q8NCQ7 364 aaPredicted RBP18.15■□□□□ 0.5
EFEMP1-202ENST00000394555 PLAAQ9Y263 795 aa18.15■□□□□ 0.5
EFEMP1-202ENST00000394555 SIK3Q9Y2K2 1263 aa18.15■□□□□ 0.5
EFEMP1-202ENST00000394555 BACH1O14867 736 aa18.15■□□□□ 0.5
EFEMP1-202ENST00000394555 PALMO75781 387 aa18.15■□□□□ 0.5
EFEMP1-202ENST00000394555 ACTN3Q08043 901 aaPredicted RBP18.15■□□□□ 0.5
EFEMP1-202ENST00000394555 SUSD4Q5VX71 490 aa18.15■□□□□ 0.5
EFEMP1-202ENST00000394555 SPATS2Q86XZ4 545 aaKnown RBP18.15■□□□□ 0.5
EFEMP1-202ENST00000394555 KIAA0895Q8NCT3 520 aa18.15■□□□□ 0.5
EFEMP1-202ENST00000394555 OR2W6PQ8NHA6 318 aa18.15■□□□□ 0.5
EFEMP1-202ENST00000394555 ATP6V1G3Q96LB4 118 aa18.15■□□□□ 0.5
EFEMP1-202ENST00000394555 CCSER1Q9C0I3 900 aa18.15■□□□□ 0.5
EFEMP1-202ENST00000394555 GDF3Q9NR23 364 aa18.15■□□□□ 0.5
EFEMP1-202ENST00000394555 PCDHA6Q9UN73 950 aa18.15■□□□□ 0.5
EFEMP1-202ENST00000394555 PCDHA8Q9Y5H6 950 aa18.15■□□□□ 0.5
EFEMP1-202ENST00000394555 TNS2Q63HR2 1409 aa18.14■□□□□ 0.49
EFEMP1-202ENST00000394555 ALS2Q96Q42 1657 aa18.14■□□□□ 0.49
EFEMP1-202ENST00000394555 ATP2C2O75185 946 aa18.14■□□□□ 0.49
EFEMP1-202ENST00000394555 EHHADHQ08426 723 aa18.14■□□□□ 0.49
EFEMP1-202ENST00000394555 PTPROQ16827 1216 aa18.14■□□□□ 0.49
EFEMP1-202ENST00000394555 LETM2Q2VYF4 491 aa18.14■□□□□ 0.49
EFEMP1-202ENST00000394555 CCDC40Q4G0X9 1142 aa18.14■□□□□ 0.49
EFEMP1-202ENST00000394555 DYMQ7RTS9 669 aa18.14■□□□□ 0.49
EFEMP1-202ENST00000394555 CCDC13Q8IYE1 715 aa18.14■□□□□ 0.49
EFEMP1-202ENST00000394555 KLC4Q9NSK0 619 aa18.14■□□□□ 0.49
EFEMP1-202ENST00000394555 MYL1P05976 194 aa18.14■□□□□ 0.49
EFEMP1-202ENST00000394555 TECP42680 631 aa18.14■□□□□ 0.49
EFEMP1-202ENST00000394555 GLE1Q53GS7 698 aaKnown RBP18.14■□□□□ 0.49
EFEMP1-202ENST00000394555 GIMAP7Q8NHV1 300 aa18.14■□□□□ 0.49
EFEMP1-202ENST00000394555 GOLGA6L10A6NI86 522 aa18.13■□□□□ 0.49
EFEMP1-202ENST00000394555 HNRNPH3P31942 346 aaKnown RBP18.13■□□□□ 0.49
EFEMP1-202ENST00000394555 KIF5BP33176 963 aa18.13■□□□□ 0.49
EFEMP1-202ENST00000394555 CCDC114Q96M63 670 aa18.13■□□□□ 0.49
EFEMP1-202ENST00000394555 ZKSCAN4Q969J2 545 aaPredicted RBP18.13■□□□□ 0.49
EFEMP1-202ENST00000394555 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.13■□□□□ 0.49
EFEMP1-202ENST00000394555 CCNT1O60563 726 aaKnown RBP18.12■□□□□ 0.49
EFEMP1-202ENST00000394555 TNFRSF8P28908 595 aa18.12■□□□□ 0.49
EFEMP1-202ENST00000394555 CDR1P51861 262 aa18.12■□□□□ 0.49
EFEMP1-202ENST00000394555 EVA1CP58658 441 aa18.12■□□□□ 0.49
EFEMP1-202ENST00000394555 CEP57Q86XR8 500 aa18.12■□□□□ 0.49
EFEMP1-202ENST00000394555 BRIP1Q9BX63 1249 aa18.12■□□□□ 0.49
EFEMP1-202ENST00000394555 A0A0G2JS52 829 aa18.12■□□□□ 0.49
EFEMP1-202ENST00000394555 CYP19A1P11511 503 aaPredicted RBP18.12■□□□□ 0.49
EFEMP1-202ENST00000394555 ODF2Q5BJF6 829 aa18.12■□□□□ 0.49
EFEMP1-202ENST00000394555 CNNM4Q6P4Q7 775 aa18.12■□□□□ 0.49
EFEMP1-202ENST00000394555 SLC4A9Q96Q91 983 aa18.12■□□□□ 0.49
EFEMP1-202ENST00000394555 CCDC121Q6ZUS5 278 aa18.12■□□□□ 0.49
EFEMP1-202ENST00000394555 CCDC84Q86UT8 332 aaPredicted RBP18.12■□□□□ 0.49
EFEMP1-202ENST00000394555 VCPKMTQ9H867 229 aa18.12■□□□□ 0.49
EFEMP1-202ENST00000394555 MYH3P11055 1940 aa18.12■□□□□ 0.49
EFEMP1-202ENST00000394555 RAD51CO43502 376 aa18.11■□□□□ 0.49
EFEMP1-202ENST00000394555 LCA5LO95447 670 aa18.11■□□□□ 0.49
EFEMP1-202ENST00000394555 FAM107AO95990 144 aa18.11■□□□□ 0.49
EFEMP1-202ENST00000394555 ITGB3BPQ13352 177 aaPredicted RBP18.11■□□□□ 0.49
EFEMP1-202ENST00000394555 LRRC41Q15345 812 aa18.11■□□□□ 0.49
EFEMP1-202ENST00000394555 TEX2Q8IWB9 1127 aa18.11■□□□□ 0.49
EFEMP1-202ENST00000394555 CPVLQ9H3G5 476 aa18.11■□□□□ 0.49
EFEMP1-202ENST00000394555 BCORQ6W2J9 1755 aa18.11■□□□□ 0.49
EFEMP1-202ENST00000394555 GOLGA6L7A0A1B0GV03 622 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms