RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 LRMPQ12912 555 aa16.87■□□□□ 0.29
MKS1-202ENST00000393119 MOB2Q70IA6 237 aa16.87■□□□□ 0.29
MKS1-202ENST00000393119 IFNKQ9P0W0 207 aa16.87■□□□□ 0.29
MKS1-202ENST00000393119 HOOK1Q9UJC3 728 aaKnown RBP16.87■□□□□ 0.29
MKS1-202ENST00000393119 CAVIN2O95810 425 aa16.87■□□□□ 0.29
MKS1-202ENST00000393119 PTPRAP18433 802 aa16.87■□□□□ 0.29
MKS1-202ENST00000393119 GRB10Q13322 594 aa16.87■□□□□ 0.29
MKS1-202ENST00000393119 KANK3Q6NY19 840 aa16.87■□□□□ 0.29
MKS1-202ENST00000393119 CCDC186Q7Z3E2 898 aa16.87■□□□□ 0.29
MKS1-202ENST00000393119 ELOA2Q8IYF1 753 aaPredicted RBP16.87■□□□□ 0.29
MKS1-202ENST00000393119 CHURC1Q8WUH1 139 aa16.87■□□□□ 0.29
MKS1-202ENST00000393119 CRYGNQ8WXF5 182 aa16.87■□□□□ 0.29
MKS1-202ENST00000393119 SAMSN1Q9NSI8 373 aaKnown RBP16.87■□□□□ 0.29
MKS1-202ENST00000393119 MYH7BA7E2Y1 1941 aa16.86■□□□□ 0.29
MKS1-202ENST00000393119 LAD1O00515 517 aa16.86■□□□□ 0.29
MKS1-202ENST00000393119 NFIBO00712 420 aa16.86■□□□□ 0.29
MKS1-202ENST00000393119 MARCH6O60337 910 aa16.86■□□□□ 0.29
MKS1-202ENST00000393119 TXLNAP40222 546 aa16.86■□□□□ 0.29
MKS1-202ENST00000393119 HMGCS2P54868 508 aa16.86■□□□□ 0.29
MKS1-202ENST00000393119 PPP4R3AQ6IN85 833 aa16.86■□□□□ 0.29
MKS1-202ENST00000393119 BPIFA3Q9BQP9 254 aa16.86■□□□□ 0.29
MKS1-202ENST00000393119 XPO4Q9C0E2 1151 aaKnown RBP16.86■□□□□ 0.29
MKS1-202ENST00000393119 CCSER1Q9C0I3 900 aa16.86■□□□□ 0.29
MKS1-202ENST00000393119 RPAP3Q9H6T3 665 aaPredicted RBP16.86■□□□□ 0.29
MKS1-202ENST00000393119 FLOT1O75955 427 aa16.86■□□□□ 0.29
MKS1-202ENST00000393119 LENG9Q96B70 501 aa16.86■□□□□ 0.29
MKS1-202ENST00000393119 FEM1BQ9UK73 627 aa16.86■□□□□ 0.29
MKS1-202ENST00000393119 SPDYE3A6NKU9 549 aa16.85■□□□□ 0.29
MKS1-202ENST00000393119 PPP1R3GB7ZBB8 358 aa16.85■□□□□ 0.29
MKS1-202ENST00000393119 SMC2O95347 1197 aa16.85■□□□□ 0.29
MKS1-202ENST00000393119 MCM6Q14566 821 aa16.85■□□□□ 0.29
MKS1-202ENST00000393119 MUM1L1Q5H9M0 696 aa16.85■□□□□ 0.29
MKS1-202ENST00000393119 SCYL3Q8IZE3 742 aa16.85■□□□□ 0.29
MKS1-202ENST00000393119 KLRG1Q96E93 195 aa16.85■□□□□ 0.29
MKS1-202ENST00000393119 HOOK2Q96ED9 719 aa16.85■□□□□ 0.29
MKS1-202ENST00000393119 KIAA1683Q9H0B3 1180 aa16.85■□□□□ 0.29
MKS1-202ENST00000393119 BLOC1S4Q9NUP1 217 aa16.85■□□□□ 0.29
MKS1-202ENST00000393119 COL20A1Q9P218 1284 aa16.85■□□□□ 0.29
MKS1-202ENST00000393119 MMP14P50281 582 aa16.85■□□□□ 0.29
MKS1-202ENST00000393119 MYL5Q02045 173 aa16.85■□□□□ 0.29
MKS1-202ENST00000393119 UTP14CQ5TAP6 766 aaKnown RBP16.85■□□□□ 0.29
MKS1-202ENST00000393119 APOBEC3FQ8IUX4 373 aaKnown RBP16.85■□□□□ 0.29
MKS1-202ENST00000393119 EEF2KMTQ96G04 330 aa16.85■□□□□ 0.29
MKS1-202ENST00000393119 SH2D4AQ9H788 454 aa16.85■□□□□ 0.29
MKS1-202ENST00000393119 ZNF112Q9UJU3 913 aa16.85■□□□□ 0.29
MKS1-202ENST00000393119 CCPG1Q9ULG6 757 aa16.85■□□□□ 0.29
MKS1-202ENST00000393119 POLR2AP24928 1970 aaKnown RBP16.84■□□□□ 0.29
MKS1-202ENST00000393119 GTPBP6O43824 516 aaPredicted RBP16.84■□□□□ 0.29
MKS1-202ENST00000393119 RPN1P04843 607 aaKnown RBP16.84■□□□□ 0.29
MKS1-202ENST00000393119 FILIP1Q7Z7B0 1213 aa16.84■□□□□ 0.29
MKS1-202ENST00000393119 SNX29Q8TEQ0 813 aa16.84■□□□□ 0.29
MKS1-202ENST00000393119 SLF1Q9BQI6 1058 aa16.84■□□□□ 0.29
MKS1-202ENST00000393119 SYNPO2Q9UMS6 1093 aa16.84■□□□□ 0.29
MKS1-202ENST00000393119 PCDHA12Q9UN75 941 aa16.84■□□□□ 0.29
MKS1-202ENST00000393119 NFE2L3Q9Y4A8 694 aa16.84■□□□□ 0.29
MKS1-202ENST00000393119 SBF1O95248 1867 aa16.84■□□□□ 0.29
MKS1-202ENST00000393119 KLRC4O43908 158 aa16.84■□□□□ 0.29
MKS1-202ENST00000393119 USP2O75604 605 aaPredicted RBP16.84■□□□□ 0.29
MKS1-202ENST00000393119 ALAS1P13196 640 aa16.84■□□□□ 0.29
MKS1-202ENST00000393119 GTF2F1P35269 517 aaKnown RBP eCLIP16.84■□□□□ 0.29
MKS1-202ENST00000393119 FXR2P51116 673 aaKnown RBP eCLIP16.84■□□□□ 0.29
MKS1-202ENST00000393119 FANCCQ00597 558 aa16.84■□□□□ 0.29
MKS1-202ENST00000393119 SARM1Q6SZW1 724 aa16.84■□□□□ 0.29
MKS1-202ENST00000393119 MYRIPQ8NFW9 859 aa16.84■□□□□ 0.29
MKS1-202ENST00000393119 ATG4CQ96DT6 458 aa16.84■□□□□ 0.29
MKS1-202ENST00000393119 CCDC94Q9BW85 323 aaPredicted RBP16.84■□□□□ 0.29
MKS1-202ENST00000393119 KBTBD4Q9NVX7 518 aa16.84■□□□□ 0.29
MKS1-202ENST00000393119 PYCARDQ9ULZ3 195 aa16.84■□□□□ 0.29
MKS1-202ENST00000393119 RIPK3Q9Y572 518 aa16.84■□□□□ 0.29
MKS1-202ENST00000393119 BACE1P56817 501 aa16.83■□□□□ 0.28
MKS1-202ENST00000393119 KMT5BQ4FZB7 885 aa16.83■□□□□ 0.28
MKS1-202ENST00000393119 DYMQ7RTS9 669 aa16.83■□□□□ 0.28
MKS1-202ENST00000393119 WDR18Q9BV38 432 aa16.83■□□□□ 0.28
MKS1-202ENST00000393119 POLD4Q9HCU8 107 aa16.83■□□□□ 0.28
MKS1-202ENST00000393119 KCNMB3Q9NPA1 279 aa16.83■□□□□ 0.28
MKS1-202ENST00000393119 CTNND2Q9UQB3 1225 aa16.83■□□□□ 0.28
MKS1-202ENST00000393119 ATAD5Q96QE3 1844 aa16.83■□□□□ 0.28
MKS1-202ENST00000393119 SREBF1P36956 1147 aa16.82■□□□□ 0.28
MKS1-202ENST00000393119 DCAF15Q66K64 600 aa16.82■□□□□ 0.28
MKS1-202ENST00000393119 FAM160B2Q86V87 743 aa16.82■□□□□ 0.28
MKS1-202ENST00000393119 MLKLQ8NB16 471 aa16.82■□□□□ 0.28
MKS1-202ENST00000393119 ZNF280CQ8ND82 737 aa16.82■□□□□ 0.28
MKS1-202ENST00000393119 ETNPPLQ8TBG4 499 aa16.82■□□□□ 0.28
MKS1-202ENST00000393119 GSDMAQ96QA5 445 aa16.82■□□□□ 0.28
MKS1-202ENST00000393119 PICK1Q9NRD5 415 aa16.82■□□□□ 0.28
MKS1-202ENST00000393119 TRIM49BA6NDI0 452 aa16.82■□□□□ 0.28
MKS1-202ENST00000393119 MEIS1O00470 390 aa16.82■□□□□ 0.28
MKS1-202ENST00000393119 IKBKBO14920 756 aa16.82■□□□□ 0.28
MKS1-202ENST00000393119 WDR46O15213 610 aaKnown RBP16.82■□□□□ 0.28
MKS1-202ENST00000393119 MSH4O15457 936 aa16.82■□□□□ 0.28
MKS1-202ENST00000393119 FCER1AP12319 257 aa16.82■□□□□ 0.28
MKS1-202ENST00000393119 USP11P51784 963 aa16.82■□□□□ 0.28
MKS1-202ENST00000393119 GOLGA8FQ08AF8 430 aa16.82■□□□□ 0.28
MKS1-202ENST00000393119 GOLGA8DPQ0D2H9 430 aa16.82■□□□□ 0.28
MKS1-202ENST00000393119 AP3B2Q13367 1082 aa16.82■□□□□ 0.28
MKS1-202ENST00000393119 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.82■□□□□ 0.28
MKS1-202ENST00000393119 PRPF38AQ8NAV1 312 aaKnown RBP16.82■□□□□ 0.28
MKS1-202ENST00000393119 IL31RAQ8NI17 732 aa16.82■□□□□ 0.28
MKS1-202ENST00000393119 CLEC4DQ8WXI8 215 aa16.82■□□□□ 0.28
MKS1-202ENST00000393119 AK8Q96MA6 479 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms