RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 PEX10O60683 326 aa15.2■□□□□ 0.02
USP44-202ENST00000393091 HSPA1AP0DMV8 641 aaKnown RBP15.2■□□□□ 0.02
USP44-202ENST00000393091 HSPA1BP0DMV9 641 aaKnown RBP15.2■□□□□ 0.02
USP44-202ENST00000393091 SYT1P21579 422 aa15.2■□□□□ 0.02
USP44-202ENST00000393091 GRM1Q13255 1194 aa15.2■□□□□ 0.02
USP44-202ENST00000393091 BRAPQ7Z569 592 aa15.2■□□□□ 0.02
USP44-202ENST00000393091 NSUN6Q8TEA1 469 aaKnown RBP15.2■□□□□ 0.02
USP44-202ENST00000393091 MCM3APO60318 1980 aa15.19■□□□□ 0.02
USP44-202ENST00000393091 TRIM29Q14134 588 aa15.19■□□□□ 0.02
USP44-202ENST00000393091 PLS1Q14651 629 aa15.19■□□□□ 0.02
USP44-202ENST00000393091 PPP4R3AQ6IN85 833 aa15.19■□□□□ 0.02
USP44-202ENST00000393091 BRMS1Q9HCU9 246 aa15.19■□□□□ 0.02
USP44-202ENST00000393091 MTMR6Q9Y217 621 aa15.19■□□□□ 0.02
USP44-202ENST00000393091 IVNS1ABPQ9Y6Y0 642 aa15.19■□□□□ 0.02
USP44-202ENST00000393091 hCG_1642624A0A1W2PR95 340 aa15.19■□□□□ 0.02
USP44-202ENST00000393091 NLRP5P59047 1200 aa15.19■□□□□ 0.02
USP44-202ENST00000393091 PGM5Q15124 567 aa15.19■□□□□ 0.02
USP44-202ENST00000393091 VSIG10LQ86VR7 867 aa15.19■□□□□ 0.02
USP44-202ENST00000393091 CD99L2Q8TCZ2 262 aa15.19■□□□□ 0.02
USP44-202ENST00000393091 MPHOSPH6Q99547 160 aaKnown RBP15.19■□□□□ 0.02
USP44-202ENST00000393091 ZSCAN16Q9H4T2 348 aaPredicted RBP15.19■□□□□ 0.02
USP44-202ENST00000393091 TNPO2O14787 897 aaKnown RBP15.18■□□□□ 0.02
USP44-202ENST00000393091 ADAMTS3O15072 1205 aa15.18■□□□□ 0.02
USP44-202ENST00000393091 Q4G0T1 1027 aa15.18■□□□□ 0.02
USP44-202ENST00000393091 ATL3Q6DD88 541 aa15.18■□□□□ 0.02
USP44-202ENST00000393091 OTOP1Q7RTM1 612 aa15.18■□□□□ 0.02
USP44-202ENST00000393091 DDX11Q96FC9 970 aa15.18■□□□□ 0.02
USP44-202ENST00000393091 PDCD2LQ9BRP1 358 aa15.18■□□□□ 0.02
USP44-202ENST00000393091 ARHGAP39Q9C0H5 1083 aa15.18■□□□□ 0.02
USP44-202ENST00000393091 UBIAD1Q9Y5Z9 338 aa15.18■□□□□ 0.02
USP44-202ENST00000393091 LOXHD1Q8IVV2 1947 aa15.18■□□□□ 0.02
USP44-202ENST00000393091 MAFGO15525 162 aa15.18■□□□□ 0.02
USP44-202ENST00000393091 BRD1O95696 1058 aa15.18■□□□□ 0.02
USP44-202ENST00000393091 LARP1BQ659C4 914 aaKnown RBP15.18■□□□□ 0.02
USP44-202ENST00000393091 ANKRD35Q8N283 1001 aa15.18■□□□□ 0.02
USP44-202ENST00000393091 NPLOC4Q8TAT6 608 aa15.18■□□□□ 0.02
USP44-202ENST00000393091 TBC1D5Q92609 795 aa15.18■□□□□ 0.02
USP44-202ENST00000393091 IPO9Q96P70 1041 aaKnown RBP15.18■□□□□ 0.02
USP44-202ENST00000393091 ANO3Q9BYT9 981 aa15.18■□□□□ 0.02
USP44-202ENST00000393091 VTA1Q9NP79 307 aa15.18■□□□□ 0.02
USP44-202ENST00000393091 PTPN22Q9Y2R2 807 aa15.18■□□□□ 0.02
USP44-202ENST00000393091 POTEB2H3BUK9 544 aa15.18■□□□□ 0.02
USP44-202ENST00000393091 GCFC2P16383 781 aaKnown RBP15.18■□□□□ 0.02
USP44-202ENST00000393091 RESTQ13127 1097 aa15.18■□□□□ 0.02
USP44-202ENST00000393091 SLAIN1Q8ND83 568 aa15.18■□□□□ 0.02
USP44-202ENST00000393091 ISY1Q9ULR0 285 aaKnown RBP15.18■□□□□ 0.02
USP44-202ENST00000393091 STX6O43752 255 aa15.17■□□□□ 0.02
USP44-202ENST00000393091 NOSTRINQ8IVI9 506 aa15.17■□□□□ 0.02
USP44-202ENST00000393091 KCNV1Q6PIU1 500 aa15.17■□□□□ 0.02
USP44-202ENST00000393091 DIS3L2Q8IYB7 885 aaKnown RBP15.17■□□□□ 0.02
USP44-202ENST00000393091 INPP4AQ96PE3 977 aaPredicted RBP15.17■□□□□ 0.02
USP44-202ENST00000393091 TAAR1Q96RJ0 339 aa15.17■□□□□ 0.02
USP44-202ENST00000393091 Q9Y3F1 56 aa15.17■□□□□ 0.02
USP44-202ENST00000393091 CTU1Q7Z7A3 348 aaKnown RBP15.16■□□□□ 0.02
USP44-202ENST00000393091 GPRASP2Q96D09 838 aa15.16■□□□□ 0.02
USP44-202ENST00000393091 TAL1P17542 331 aaPredicted RBP15.16■□□□□ 0.02
USP44-202ENST00000393091 CCND2P30279 289 aa15.16■□□□□ 0.02
USP44-202ENST00000393091 NONOQ15233 471 aaKnown RBP eCLIP15.16■□□□□ 0.02
USP44-202ENST00000393091 SAFBQ15424 915 aaKnown RBP eCLIP15.16■□□□□ 0.02
USP44-202ENST00000393091 EMID1Q96A84 441 aaPredicted RBP15.16■□□□□ 0.02
USP44-202ENST00000393091 KCNJ14Q9UNX9 436 aa15.16■□□□□ 0.02
USP44-202ENST00000393091 TBX3O15119 743 aa15.16■□□□□ 0.02
USP44-202ENST00000393091 EIF3JO75822 258 aaKnown RBP15.16■□□□□ 0.02
USP44-202ENST00000393091 USP17L6PQ6QN14 398 aa15.16■□□□□ 0.02
USP44-202ENST00000393091 TINF2Q9BSI4 451 aa15.16■□□□□ 0.02
USP44-202ENST00000393091 GABRQQ9UN88 632 aa15.16■□□□□ 0.02
USP44-202ENST00000393091 IGLV3-22A0A075B6J6 115 aa15.15■□□□□ 0.02
USP44-202ENST00000393091 CFBP00751 764 aa15.15■□□□□ 0.02
USP44-202ENST00000393091 PRKCZQ05513 592 aa15.15■□□□□ 0.02
USP44-202ENST00000393091 CLEC17AQ6ZS10 378 aa15.15■□□□□ 0.02
USP44-202ENST00000393091 OXER1Q8TDS5 423 aa15.15■□□□□ 0.02
USP44-202ENST00000393091 NFASCO94856 1347 aa15.15■□□□□ 0.02
USP44-202ENST00000393091 SPDYE3A6NKU9 549 aa15.15■□□□□ 0.02
USP44-202ENST00000393091 KIF28PB7ZC32 967 aa15.15■□□□□ 0.02
USP44-202ENST00000393091 MEIS1O00470 390 aa15.15■□□□□ 0.02
USP44-202ENST00000393091 SNAI1O95863 264 aaPredicted RBP15.15■□□□□ 0.02
USP44-202ENST00000393091 ZSCAN22P10073 491 aaPredicted RBP15.15■□□□□ 0.02
USP44-202ENST00000393091 TGFB3P10600 412 aa15.15■□□□□ 0.02
USP44-202ENST00000393091 SETQ01105 290 aaPredicted RBP15.15■□□□□ 0.02
USP44-202ENST00000393091 RMDN3Q96TC7 470 aa15.15■□□□□ 0.02
USP44-202ENST00000393091 FLRT1Q9NZU1 646 aa15.15■□□□□ 0.02
USP44-202ENST00000393091 CYBAP13498 195 aa15.14■□□□□ 0.01
USP44-202ENST00000393091 MRPS9P82933 396 aaKnown RBP15.14■□□□□ 0.01
USP44-202ENST00000393091 CNTN2Q02246 1040 aa15.14■□□□□ 0.01
USP44-202ENST00000393091 UBE2SQ16763 222 aa15.14■□□□□ 0.01
USP44-202ENST00000393091 LENG9Q96B70 501 aa15.14■□□□□ 0.01
USP44-202ENST00000393091 ARMC5Q96C12 935 aa15.14■□□□□ 0.01
USP44-202ENST00000393091 JADE2Q9NQC1 790 aa15.14■□□□□ 0.01
USP44-202ENST00000393091 ZDHHC9Q9Y397 364 aa15.14■□□□□ 0.01
USP44-202ENST00000393091 FLT3LGP49771 235 aa15.14■□□□□ 0.01
USP44-202ENST00000393091 NUCB2P80303 420 aa15.14■□□□□ 0.01
USP44-202ENST00000393091 TAPT1Q6NXT6 567 aa15.14■□□□□ 0.01
USP44-202ENST00000393091 HOMER2Q9NSB8 354 aa15.14■□□□□ 0.01
USP44-202ENST00000393091 BTBD18B2RXH4 712 aa15.14■□□□□ 0.01
USP44-202ENST00000393091 SPATA31C2B4DYI2 1134 aa15.14■□□□□ 0.01
USP44-202ENST00000393091 NKRFO15226 690 aaKnown RBP eCLIP15.14■□□□□ 0.01
USP44-202ENST00000393091 NR3C2P08235 984 aa15.14■□□□□ 0.01
USP44-202ENST00000393091 ZNF865P0CJ78 1059 aaPredicted RBP15.14■□□□□ 0.01
USP44-202ENST00000393091 ARHGAP4P98171 946 aa15.14■□□□□ 0.01
USP44-202ENST00000393091 FBXO46Q6PJ61 603 aaPredicted RBP15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms