RNA–Protein interactions for RNA: ENST00000392556.8

TRAF3IP2-208, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best) BASIC

Gene TRAF3IP2, Length 2,188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-208ENST00000392556 LRRN4CLQ8ND94 238 aa12.9□□□□□ -0.34
TRAF3IP2-208ENST00000392556 ATG4CQ96DT6 458 aa12.9□□□□□ -0.34
TRAF3IP2-208ENST00000392556 UBE2OQ9C0C9 1292 aaKnown RBP12.9□□□□□ -0.34
TRAF3IP2-208ENST00000392556 PHLPP2Q6ZVD8 1323 aa12.9□□□□□ -0.35
TRAF3IP2-208ENST00000392556 ALPK3Q96L96 1907 aa12.89□□□□□ -0.35
TRAF3IP2-208ENST00000392556 CENPFP49454 3210 aa12.89□□□□□ -0.35
TRAF3IP2-208ENST00000392556 CCDC69A6NI79 296 aa12.89□□□□□ -0.35
TRAF3IP2-208ENST00000392556 RNF113AO15541 343 aaKnown RBP12.89□□□□□ -0.35
TRAF3IP2-208ENST00000392556 EPB41L2O43491 1005 aaKnown RBP12.89□□□□□ -0.35
TRAF3IP2-208ENST00000392556 STX6O43752 255 aa12.89□□□□□ -0.35
TRAF3IP2-208ENST00000392556 SEC31AO94979 1220 aaKnown RBP12.89□□□□□ -0.35
TRAF3IP2-208ENST00000392556 SMC2O95347 1197 aa12.89□□□□□ -0.35
TRAF3IP2-208ENST00000392556 SSR1P43307 286 aaKnown RBP12.89□□□□□ -0.35
TRAF3IP2-208ENST00000392556 GSDMDP57764 484 aa12.89□□□□□ -0.35
TRAF3IP2-208ENST00000392556 KCTD2Q14681 263 aa12.89□□□□□ -0.35
TRAF3IP2-208ENST00000392556 C1orf53Q5VUE5 145 aa12.89□□□□□ -0.35
TRAF3IP2-208ENST00000392556 GPR161Q8N6U8 529 aaKnown RBP12.89□□□□□ -0.35
TRAF3IP2-208ENST00000392556 FUT8Q9BYC5 575 aa12.89□□□□□ -0.35
TRAF3IP2-208ENST00000392556 PUS7LQ9H0K6 701 aaKnown RBP12.89□□□□□ -0.35
TRAF3IP2-208ENST00000392556 PRKAG2Q9UGJ0 569 aa12.89□□□□□ -0.35
TRAF3IP2-208ENST00000392556 PPP1R9AQ9ULJ8 1098 aa12.89□□□□□ -0.35
TRAF3IP2-208ENST00000392556 MAP2K7O14733 419 aa12.88□□□□□ -0.35
TRAF3IP2-208ENST00000392556 FDX1P10109 184 aa12.88□□□□□ -0.35
TRAF3IP2-208ENST00000392556 DHX8Q14562 1220 aaKnown RBP12.88□□□□□ -0.35
TRAF3IP2-208ENST00000392556 PLS1Q14651 629 aa12.88□□□□□ -0.35
TRAF3IP2-208ENST00000392556 LRRC26Q2I0M4 334 aa12.88□□□□□ -0.35
TRAF3IP2-208ENST00000392556 JAKMIP3Q5VZ66 844 aa12.88□□□□□ -0.35
TRAF3IP2-208ENST00000392556 FAM212AQ96EL1 285 aa12.88□□□□□ -0.35
TRAF3IP2-208ENST00000392556 LBHD1Q9BQE6 289 aaPredicted RBP12.88□□□□□ -0.35
TRAF3IP2-208ENST00000392556 NACAP1Q9BZK3 213 aa12.88□□□□□ -0.35
TRAF3IP2-208ENST00000392556 MKNK2Q9HBH9 465 aa12.88□□□□□ -0.35
TRAF3IP2-208ENST00000392556 ARFGAP3Q9NP61 516 aa12.88□□□□□ -0.35
TRAF3IP2-208ENST00000392556 FIBPO43427 364 aa12.88□□□□□ -0.35
TRAF3IP2-208ENST00000392556 LIG1P18858 919 aa12.88□□□□□ -0.35
TRAF3IP2-208ENST00000392556 STAT3P40763 770 aa12.88□□□□□ -0.35
TRAF3IP2-208ENST00000392556 MAML3Q96JK9 1138 aa12.88□□□□□ -0.35
TRAF3IP2-208ENST00000392556 MMP19Q99542 508 aa12.88□□□□□ -0.35
TRAF3IP2-208ENST00000392556 SENP6Q9GZR1 1112 aaPredicted RBP12.88□□□□□ -0.35
TRAF3IP2-208ENST00000392556 PDRG1Q9NUG6 133 aa12.88□□□□□ -0.35
TRAF3IP2-208ENST00000392556 TRMT1Q9NXH9 659 aaKnown RBP12.88□□□□□ -0.35
TRAF3IP2-208ENST00000392556 MYH7P12883 1935 aa12.88□□□□□ -0.35
TRAF3IP2-208ENST00000392556 MYH8P13535 1937 aa12.88□□□□□ -0.35
TRAF3IP2-208ENST00000392556 MKI67P46013 3256 aaKnown RBP12.87□□□□□ -0.35
TRAF3IP2-208ENST00000392556 GSG1L2A8MUP6 293 aa12.87□□□□□ -0.35
TRAF3IP2-208ENST00000392556 VWA5AO00534 786 aa12.87□□□□□ -0.35
TRAF3IP2-208ENST00000392556 ATP2A1O14983 1001 aa12.87□□□□□ -0.35
TRAF3IP2-208ENST00000392556 COBLO75128 1261 aa12.87□□□□□ -0.35
TRAF3IP2-208ENST00000392556 SLC3A2P08195 630 aaKnown RBP12.87□□□□□ -0.35
TRAF3IP2-208ENST00000392556 EVX2Q03828 476 aa12.87□□□□□ -0.35
TRAF3IP2-208ENST00000392556 SEMA3FQ13275 785 aa12.87□□□□□ -0.35
TRAF3IP2-208ENST00000392556 TMEM132BQ14DG7 1078 aa12.87□□□□□ -0.35
TRAF3IP2-208ENST00000392556 KIAA1755Q5JYT7 1200 aa12.87□□□□□ -0.35
TRAF3IP2-208ENST00000392556 SPICE1Q8N0Z3 855 aa12.87□□□□□ -0.35
TRAF3IP2-208ENST00000392556 BRCA2P51587 3418 aa12.87□□□□□ -0.35
TRAF3IP2-208ENST00000392556 RLFQ13129 1914 aa12.87□□□□□ -0.35
TRAF3IP2-208ENST00000392556 SNX17Q15036 470 aa12.87□□□□□ -0.35
TRAF3IP2-208ENST00000392556 PPP2R5AQ15172 486 aa12.87□□□□□ -0.35
TRAF3IP2-208ENST00000392556 PRPF38AQ8NAV1 312 aaKnown RBP12.87□□□□□ -0.35
TRAF3IP2-208ENST00000392556 TRPV1Q8NER1 839 aa12.87□□□□□ -0.35
TRAF3IP2-208ENST00000392556 MKL1Q969V6 931 aa12.87□□□□□ -0.35
TRAF3IP2-208ENST00000392556 PPP1R13BQ96KQ4 1090 aa12.87□□□□□ -0.35
TRAF3IP2-208ENST00000392556 SLF1Q9BQI6 1058 aa12.87□□□□□ -0.35
TRAF3IP2-208ENST00000392556 TEX13BQ9BXU2 312 aa12.87□□□□□ -0.35
TRAF3IP2-208ENST00000392556 DDX19AQ9NUU7 478 aaKnown RBP12.87□□□□□ -0.35
TRAF3IP2-208ENST00000392556 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.87□□□□□ -0.35
TRAF3IP2-208ENST00000392556 TCHHQ07283 1943 aa12.87□□□□□ -0.35
TRAF3IP2-208ENST00000392556 CYP2D7A0A087X1C5 515 aa12.86□□□□□ -0.35
TRAF3IP2-208ENST00000392556 H3BQF6 201 aa12.86□□□□□ -0.35
TRAF3IP2-208ENST00000392556 SYN1P17600 705 aa12.86□□□□□ -0.35
TRAF3IP2-208ENST00000392556 RASA1P20936 1047 aa12.86□□□□□ -0.35
TRAF3IP2-208ENST00000392556 SYT1P21579 422 aa12.86□□□□□ -0.35
TRAF3IP2-208ENST00000392556 ZNF165P49910 485 aa12.86□□□□□ -0.35
TRAF3IP2-208ENST00000392556 OAZ1P54368 228 aa12.86□□□□□ -0.35
TRAF3IP2-208ENST00000392556 ZNF444Q8N0Y2 327 aaPredicted RBP12.86□□□□□ -0.35
TRAF3IP2-208ENST00000392556 IMPACTQ9P2X3 320 aa12.86□□□□□ -0.35
TRAF3IP2-208ENST00000392556 FBXO40Q9UH90 709 aa12.86□□□□□ -0.35
TRAF3IP2-208ENST00000392556 ANKRD33BA6NCL7 494 aa12.86□□□□□ -0.35
TRAF3IP2-208ENST00000392556 CCP110O43303 1012 aa12.86□□□□□ -0.35
TRAF3IP2-208ENST00000392556 PPFIA4O75335 1185 aa12.86□□□□□ -0.35
TRAF3IP2-208ENST00000392556 IRX1P78414 480 aaPredicted RBP12.86□□□□□ -0.35
TRAF3IP2-208ENST00000392556 FRMPD3Q5JV73 1810 aa12.86□□□□□ -0.35
TRAF3IP2-208ENST00000392556 E4F1Q66K89 784 aaPredicted RBP12.86□□□□□ -0.35
TRAF3IP2-208ENST00000392556 FAM109BQ6ICB4 259 aaPredicted RBP12.86□□□□□ -0.35
TRAF3IP2-208ENST00000392556 FOXR1Q6PIV2 292 aa12.86□□□□□ -0.35
TRAF3IP2-208ENST00000392556 ZNF467Q7Z7K2 595 aaPredicted RBP12.86□□□□□ -0.35
TRAF3IP2-208ENST00000392556 REPS2Q8NFH8 660 aa12.86□□□□□ -0.35
TRAF3IP2-208ENST00000392556 MIEF2Q96C03 454 aa12.86□□□□□ -0.35
TRAF3IP2-208ENST00000392556 TINF2Q9BSI4 451 aa12.86□□□□□ -0.35
TRAF3IP2-208ENST00000392556 OSBPL3Q9H4L5 887 aa12.86□□□□□ -0.35
TRAF3IP2-208ENST00000392556 DNAI1Q9UI46 699 aa12.86□□□□□ -0.35
TRAF3IP2-208ENST00000392556 ZNF214Q9UL59 606 aaPredicted RBP12.86□□□□□ -0.35
TRAF3IP2-208ENST00000392556 PLIN4Q96Q06 1357 aa12.85□□□□□ -0.35
TRAF3IP2-208ENST00000392556 SYNGAP1Q96PV0 1343 aa12.85□□□□□ -0.35
TRAF3IP2-208ENST00000392556 IGKV6D-41A0A0C4DH26 115 aa12.85□□□□□ -0.35
TRAF3IP2-208ENST00000392556 SOX1O00570 391 aaPredicted RBP12.85□□□□□ -0.35
TRAF3IP2-208ENST00000392556 GPAA1O43292 621 aa12.85□□□□□ -0.35
TRAF3IP2-208ENST00000392556 ZBED4O75132 1171 aa12.85□□□□□ -0.35
TRAF3IP2-208ENST00000392556 RARBP10826 455 aa12.85□□□□□ -0.35
TRAF3IP2-208ENST00000392556 HNRNPH1P31943 449 aaKnown RBP12.85□□□□□ -0.35
TRAF3IP2-208ENST00000392556 MNAT1P51948 309 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms