RNA–Protein interactions for RNA: ENST00000391941.6

ERCC2-201, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC2, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-201ENST00000391941 EFCC1Q9HA90 598 aa20.01■□□□□ 0.79
ERCC2-201ENST00000391941 FLT1P17948 1338 aa20.01■□□□□ 0.79
ERCC2-201ENST00000391941 SAMD1Q6SPF0 538 aaPredicted RBP20.01■□□□□ 0.79
ERCC2-201ENST00000391941 CCNE1P24864 410 aa20■□□□□ 0.79
ERCC2-201ENST00000391941 SEC24CP53992 1094 aa20■□□□□ 0.79
ERCC2-201ENST00000391941 ITPK1Q13572 414 aa20■□□□□ 0.79
ERCC2-201ENST00000391941 DIXDC1Q155Q3 683 aa20■□□□□ 0.79
ERCC2-201ENST00000391941 GRIK5Q16478 980 aa20■□□□□ 0.79
ERCC2-201ENST00000391941 TDRD12Q587J7 1177 aaKnown RBP20■□□□□ 0.79
ERCC2-201ENST00000391941 GPATCH11Q8N954 259 aa20■□□□□ 0.79
ERCC2-201ENST00000391941 RPGRIP1Q96KN7 1286 aa20■□□□□ 0.79
ERCC2-201ENST00000391941 BIN2Q9UBW5 565 aaPredicted RBP20■□□□□ 0.79
ERCC2-201ENST00000391941 MINPP1Q9UNW1 487 aa20■□□□□ 0.79
ERCC2-201ENST00000391941 CAMTA2O94983 1202 aa20■□□□□ 0.79
ERCC2-201ENST00000391941 KCNB1Q14721 858 aa20■□□□□ 0.79
ERCC2-201ENST00000391941 CAVIN4Q5BKX8 364 aa20■□□□□ 0.79
ERCC2-201ENST00000391941 PURBQ96QR8 312 aaKnown RBP20■□□□□ 0.79
ERCC2-201ENST00000391941 NUDT12Q9BQG2 462 aa20■□□□□ 0.79
ERCC2-201ENST00000391941 CACNB1Q02641 598 aaPredicted RBP19.99■□□□□ 0.79
ERCC2-201ENST00000391941 POTEDQ86YR6 584 aa19.99■□□□□ 0.79
ERCC2-201ENST00000391941 CCDC43Q96MW1 224 aaKnown RBP19.99■□□□□ 0.79
ERCC2-201ENST00000391941 MAD2L2Q9UI95 211 aa19.99■□□□□ 0.79
ERCC2-201ENST00000391941 MYO1FO00160 1098 aa19.99■□□□□ 0.79
ERCC2-201ENST00000391941 EBAG9O00559 213 aa19.99■□□□□ 0.79
ERCC2-201ENST00000391941 TACC1O75410 805 aa19.99■□□□□ 0.79
ERCC2-201ENST00000391941 ERLIN2O94905 339 aa19.99■□□□□ 0.79
ERCC2-201ENST00000391941 CALML3P27482 149 aa19.99■□□□□ 0.79
ERCC2-201ENST00000391941 GUCY2DQ02846 1103 aa19.99■□□□□ 0.79
ERCC2-201ENST00000391941 USP17L2Q6R6M4 530 aa19.99■□□□□ 0.79
ERCC2-201ENST00000391941 ZNF662Q6ZS27 426 aa19.99■□□□□ 0.79
ERCC2-201ENST00000391941 NHSL1Q5SYE7 1610 aa19.99■□□□□ 0.79
ERCC2-201ENST00000391941 POTEMA6NI47 508 aa19.98■□□□□ 0.79
ERCC2-201ENST00000391941 MAGEA1P43355 309 aa19.98■□□□□ 0.79
ERCC2-201ENST00000391941 MMTAG2Q9BU76 263 aaKnown RBP19.98■□□□□ 0.79
ERCC2-201ENST00000391941 TLR10Q9BXR5 811 aa19.98■□□□□ 0.79
ERCC2-201ENST00000391941 UBA5Q9GZZ9 404 aa19.98■□□□□ 0.79
ERCC2-201ENST00000391941 EPB41L5Q9HCM4 733 aa19.98■□□□□ 0.79
ERCC2-201ENST00000391941 EIF3HO15372 352 aaKnown RBP eCLIP19.98■□□□□ 0.79
ERCC2-201ENST00000391941 C8orf74Q6P047 294 aa19.98■□□□□ 0.79
ERCC2-201ENST00000391941 OR2W6PQ8NHA6 318 aa19.98■□□□□ 0.79
ERCC2-201ENST00000391941 PACSIN1Q9BY11 444 aa19.98■□□□□ 0.79
ERCC2-201ENST00000391941 FGFBP2Q9BYJ0 223 aa19.98■□□□□ 0.79
ERCC2-201ENST00000391941 NDST4Q9H3R1 872 aa19.98■□□□□ 0.79
ERCC2-201ENST00000391941 M0R2N6 131 aa19.97■□□□□ 0.79
ERCC2-201ENST00000391941 ORC4O43929 436 aa19.97■□□□□ 0.79
ERCC2-201ENST00000391941 SHOX2O60902 331 aaPredicted RBP19.97■□□□□ 0.79
ERCC2-201ENST00000391941 PCP11498 1178 aaKnown RBP19.97■□□□□ 0.79
ERCC2-201ENST00000391941 CCDC170Q8IYT3 715 aa19.97■□□□□ 0.79
ERCC2-201ENST00000391941 ANO9A1A5B4 782 aa19.97■□□□□ 0.79
ERCC2-201ENST00000391941 STXBP3O00186 592 aa19.97■□□□□ 0.79
ERCC2-201ENST00000391941 NDUFAB1O14561 156 aa19.97■□□□□ 0.79
ERCC2-201ENST00000391941 EFCAB13Q8IY85 973 aa19.97■□□□□ 0.79
ERCC2-201ENST00000391941 RNPC3Q96LT9 517 aaKnown RBP19.97■□□□□ 0.79
ERCC2-201ENST00000391941 MKNK2Q9HBH9 465 aa19.97■□□□□ 0.79
ERCC2-201ENST00000391941 STIM2Q9P246 746 aa19.97■□□□□ 0.79
ERCC2-201ENST00000391941 MYMKA6NI61 221 aa19.97■□□□□ 0.79
ERCC2-201ENST00000391941 NAPAP54920 295 aa19.97■□□□□ 0.79
ERCC2-201ENST00000391941 PPFIA1Q13136 1202 aa19.97■□□□□ 0.79
ERCC2-201ENST00000391941 NNTQ13423 1086 aa19.97■□□□□ 0.79
ERCC2-201ENST00000391941 KCNV1Q6PIU1 500 aa19.97■□□□□ 0.79
ERCC2-201ENST00000391941 KCNK18Q7Z418 384 aa19.97■□□□□ 0.79
ERCC2-201ENST00000391941 KLHL7Q8IXQ5 586 aa19.97■□□□□ 0.79
ERCC2-201ENST00000391941 TRIM58Q8NG06 486 aa19.97■□□□□ 0.79
ERCC2-201ENST00000391941 RUFY1Q96T51 708 aa19.97■□□□□ 0.79
ERCC2-201ENST00000391941 TCP11L1Q9NUJ3 509 aa19.97■□□□□ 0.79
ERCC2-201ENST00000391941 CCDC87Q9NVE4 849 aa19.97■□□□□ 0.79
ERCC2-201ENST00000391941 SIK3Q9Y2K2 1263 aa19.97■□□□□ 0.79
ERCC2-201ENST00000391941 ITGB4P16144 1822 aa19.97■□□□□ 0.79
ERCC2-201ENST00000391941 CACNA1SQ13698 1873 aa19.96■□□□□ 0.79
ERCC2-201ENST00000391941 HPDP32754 393 aaPredicted RBP19.96■□□□□ 0.79
ERCC2-201ENST00000391941 VWA3BQ502W6 1294 aa19.96■□□□□ 0.79
ERCC2-201ENST00000391941 KRT12Q99456 494 aa19.96■□□□□ 0.79
ERCC2-201ENST00000391941 NUP58Q9BVL2 599 aa19.96■□□□□ 0.79
ERCC2-201ENST00000391941 CRNKL1Q9BZJ0 848 aaKnown RBP19.96■□□□□ 0.79
ERCC2-201ENST00000391941 LOC102724159A0A0B4J2E5 919 aa19.96■□□□□ 0.79
ERCC2-201ENST00000391941 ZNF233A6NK53 670 aa19.96■□□□□ 0.79
ERCC2-201ENST00000391941 USO1O60763 962 aaKnown RBP19.96■□□□□ 0.79
ERCC2-201ENST00000391941 KIF5BP33176 963 aa19.96■□□□□ 0.79
ERCC2-201ENST00000391941 PWP2Q15269 919 aaKnown RBP19.96■□□□□ 0.79
ERCC2-201ENST00000391941 KLHDC7AQ5VTJ3 777 aa19.96■□□□□ 0.79
ERCC2-201ENST00000391941 SH3RF3Q8TEJ3 882 aaPredicted RBP19.96■□□□□ 0.79
ERCC2-201ENST00000391941 DHTKD1Q96HY7 919 aaPredicted RBP19.96■□□□□ 0.79
ERCC2-201ENST00000391941 PLAGL2Q9UPG8 496 aa19.96■□□□□ 0.79
ERCC2-201ENST00000391941 HEXIM1O94992 359 aaKnown RBP19.95■□□□□ 0.78
ERCC2-201ENST00000391941 OR52Z1P0C646 297 aa19.95■□□□□ 0.78
ERCC2-201ENST00000391941 CACNA2D4Q7Z3S7 1137 aa19.95■□□□□ 0.78
ERCC2-201ENST00000391941 DDX42Q86XP3 938 aaKnown RBP eCLIP19.95■□□□□ 0.78
ERCC2-201ENST00000391941 CLEC10AQ8IUN9 316 aa19.95■□□□□ 0.78
ERCC2-201ENST00000391941 MAPKAPK5Q8IW41 473 aa19.95■□□□□ 0.78
ERCC2-201ENST00000391941 MMGT1Q8N4V1 131 aa19.95■□□□□ 0.78
ERCC2-201ENST00000391941 RETREG2Q8NC44 543 aa19.95■□□□□ 0.78
ERCC2-201ENST00000391941 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.95■□□□□ 0.78
ERCC2-201ENST00000391941 SLAIN2Q9P270 581 aa19.95■□□□□ 0.78
ERCC2-201ENST00000391941 CAPN7Q9Y6W3 813 aa19.95■□□□□ 0.78
ERCC2-201ENST00000391941 PALMO75781 387 aa19.94■□□□□ 0.78
ERCC2-201ENST00000391941 ADAMTS2O95450 1211 aa19.94■□□□□ 0.78
ERCC2-201ENST00000391941 SSBP05455 408 aaKnown RBP eCLIP19.94■□□□□ 0.78
ERCC2-201ENST00000391941 TSPY3P0CV98 308 aa19.94■□□□□ 0.78
ERCC2-201ENST00000391941 TSPY8P0CW00 308 aa19.94■□□□□ 0.78
ERCC2-201ENST00000391941 EHHADHQ08426 723 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms