RNA–Protein interactions for RNA: ENST00000390426.2

TRAV4-201, Transcript of T cell receptor alpha variable 4, humanhuman

APPRIS P1 BASIC

Gene TRAV4, Length 395 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4-201ENST00000390426 B4DLN1 442 aa12.5□□□□□ -0.41
TRAV4-201ENST00000390426 NKRFO15226 690 aaKnown RBP eCLIP12.5□□□□□ -0.41
TRAV4-201ENST00000390426 ARIH2O95376 493 aa12.5□□□□□ -0.41
TRAV4-201ENST00000390426 PARP1P09874 1014 aaKnown RBP12.5□□□□□ -0.41
TRAV4-201ENST00000390426 CYP2C9P11712 490 aa12.5□□□□□ -0.41
TRAV4-201ENST00000390426 GSPT1P15170 499 aaKnown RBP12.5□□□□□ -0.41
TRAV4-201ENST00000390426 MRPL12P52815 198 aaKnown RBP12.5□□□□□ -0.41
TRAV4-201ENST00000390426 NBPF20Q3BBV1 942 aa12.5□□□□□ -0.41
TRAV4-201ENST00000390426 BRDTQ58F21 947 aaPredicted RBP12.5□□□□□ -0.41
TRAV4-201ENST00000390426 FAM47CQ5HY64 1035 aa12.5□□□□□ -0.41
TRAV4-201ENST00000390426 TTC22Q5TAA0 569 aa12.5□□□□□ -0.41
TRAV4-201ENST00000390426 CYB5R4Q7L1T6 521 aa12.5□□□□□ -0.41
TRAV4-201ENST00000390426 OTOP2Q7RTS6 562 aa12.5□□□□□ -0.41
TRAV4-201ENST00000390426 FBXO11Q86XK2 927 aa12.5□□□□□ -0.41
TRAV4-201ENST00000390426 STAG2Q8N3U4 1231 aa12.5□□□□□ -0.41
TRAV4-201ENST00000390426 HERVK_113Q902F9 699 aa12.5□□□□□ -0.41
TRAV4-201ENST00000390426 SCLYQ96I15 445 aa12.5□□□□□ -0.41
TRAV4-201ENST00000390426 PBX4Q9BYU1 374 aa12.5□□□□□ -0.41
TRAV4-201ENST00000390426 WNT8AQ9H1J5 351 aa12.5□□□□□ -0.41
TRAV4-201ENST00000390426 CNNM2Q9H8M5 875 aa12.5□□□□□ -0.41
TRAV4-201ENST00000390426 JMJD4Q9H9V9 463 aa12.5□□□□□ -0.41
TRAV4-201ENST00000390426 CXXC1Q9P0U4 656 aaPredicted RBP12.5□□□□□ -0.41
TRAV4-201ENST00000390426 COL20A1Q9P218 1284 aa12.5□□□□□ -0.41
TRAV4-201ENST00000390426 RAD50Q92878 1312 aa12.49□□□□□ -0.41
TRAV4-201ENST00000390426 SUPT20HL2P0C7V6 817 aa12.49□□□□□ -0.41
TRAV4-201ENST00000390426 CHMP4BP1P59074 171 aa12.49□□□□□ -0.41
TRAV4-201ENST00000390426 IRX6P78412 446 aaPredicted RBP12.49□□□□□ -0.41
TRAV4-201ENST00000390426 TTLL4Q14679 1199 aa12.49□□□□□ -0.41
TRAV4-201ENST00000390426 IFIT1BQ5T764 474 aaKnown RBP12.49□□□□□ -0.41
TRAV4-201ENST00000390426 SEPT14Q6ZU15 432 aa12.49□□□□□ -0.41
TRAV4-201ENST00000390426 MCF2L2Q86YR7 1114 aa12.49□□□□□ -0.41
TRAV4-201ENST00000390426 COL25A1Q9BXS0 654 aaPredicted RBP12.49□□□□□ -0.41
TRAV4-201ENST00000390426 MRPL11Q9Y3B7 192 aaKnown RBP12.49□□□□□ -0.41
TRAV4-201ENST00000390426 CUL9Q8IWT3 2517 aa12.49□□□□□ -0.41
TRAV4-201ENST00000390426 COL6A3P12111 3177 aa12.48□□□□□ -0.41
TRAV4-201ENST00000390426 A6NJR5 290 aa12.48□□□□□ -0.41
TRAV4-201ENST00000390426 KLRF2D3W0D1 207 aa12.48□□□□□ -0.41
TRAV4-201ENST00000390426 EIF2AK2P19525 551 aaKnown RBP12.48□□□□□ -0.41
TRAV4-201ENST00000390426 PTH1RQ03431 593 aa12.48□□□□□ -0.41
TRAV4-201ENST00000390426 SEC23AQ15436 765 aa12.48□□□□□ -0.41
TRAV4-201ENST00000390426 LY6KQ17RY6 165 aa12.48□□□□□ -0.41
TRAV4-201ENST00000390426 CCDC62Q6P9F0 684 aa12.48□□□□□ -0.41
TRAV4-201ENST00000390426 DEFB128Q7Z7B8 93 aa12.48□□□□□ -0.41
TRAV4-201ENST00000390426 RPUSD2Q8IZ73 545 aaKnown RBP12.48□□□□□ -0.41
TRAV4-201ENST00000390426 NSUN6Q8TEA1 469 aaKnown RBP12.48□□□□□ -0.41
TRAV4-201ENST00000390426 RMDN3Q96TC7 470 aa12.48□□□□□ -0.41
TRAV4-201ENST00000390426 MTIF3Q9H2K0 278 aaKnown RBP12.48□□□□□ -0.41
TRAV4-201ENST00000390426 MSRAQ9UJ68 235 aa12.48□□□□□ -0.41
TRAV4-201ENST00000390426 LAMA4Q16363 1823 aa12.47□□□□□ -0.41
TRAV4-201ENST00000390426 ZBBXA8MT70 800 aa12.47□□□□□ -0.41
TRAV4-201ENST00000390426 KPNA6O60684 536 aa12.47□□□□□ -0.41
TRAV4-201ENST00000390426 CFBP00751 764 aa12.47□□□□□ -0.41
TRAV4-201ENST00000390426 CHMLP26374 656 aa12.47□□□□□ -0.41
TRAV4-201ENST00000390426 TRDNQ13061 729 aa12.47□□□□□ -0.41
TRAV4-201ENST00000390426 STXBP2Q15833 593 aa12.47□□□□□ -0.41
TRAV4-201ENST00000390426 ARHGEF16Q5VV41 709 aa12.47□□□□□ -0.41
TRAV4-201ENST00000390426 CHST3Q7LGC8 479 aa12.47□□□□□ -0.41
TRAV4-201ENST00000390426 AFG1LQ8WV93 481 aa12.47□□□□□ -0.41
TRAV4-201ENST00000390426 VWCEQ96DN2 955 aa12.47□□□□□ -0.41
TRAV4-201ENST00000390426 NKX2-4Q9H2Z4 354 aa12.47□□□□□ -0.41
TRAV4-201ENST00000390426 PRDM12Q9H4Q4 367 aa12.47□□□□□ -0.41
TRAV4-201ENST00000390426 MAD2L2Q9UI95 211 aa12.47□□□□□ -0.41
TRAV4-201ENST00000390426 OPLAHO14841 1288 aa12.46□□□□□ -0.41
TRAV4-201ENST00000390426 PPP1R11O60927 126 aaPredicted RBP12.46□□□□□ -0.41
TRAV4-201ENST00000390426 GH1P01241 217 aa12.46□□□□□ -0.41
TRAV4-201ENST00000390426 NR3C2P08235 984 aa12.46□□□□□ -0.41
TRAV4-201ENST00000390426 MMP3P08254 477 aa12.46□□□□□ -0.41
TRAV4-201ENST00000390426 CYP21A2P08686 494 aa12.46□□□□□ -0.41
TRAV4-201ENST00000390426 RABGGTBP53611 331 aa12.46□□□□□ -0.41
TRAV4-201ENST00000390426 ARHGAP1Q07960 439 aa12.46□□□□□ -0.41
TRAV4-201ENST00000390426 RAB30Q15771 203 aa12.46□□□□□ -0.41
TRAV4-201ENST00000390426 NFRKBQ6P4R8 1299 aa12.46□□□□□ -0.41
TRAV4-201ENST00000390426 USP38Q8NB14 1042 aa12.46□□□□□ -0.41
TRAV4-201ENST00000390426 RUFY2Q8WXA3 655 aa12.46□□□□□ -0.41
TRAV4-201ENST00000390426 PPM1EQ8WY54 764 aa12.46□□□□□ -0.41
TRAV4-201ENST00000390426 IWS1Q96ST2 819 aa12.46□□□□□ -0.41
TRAV4-201ENST00000390426 AMNQ9BXJ7 453 aa12.46□□□□□ -0.41
TRAV4-201ENST00000390426 MAF1Q9H063 256 aa12.46□□□□□ -0.41
TRAV4-201ENST00000390426 YBX2Q9Y2T7 364 aaKnown RBP12.46□□□□□ -0.41
TRAV4-201ENST00000390426 TAF6LQ9Y6J9 622 aa12.46□□□□□ -0.41
TRAV4-201ENST00000390426 SLC4A7Q9Y6M7 1214 aa12.46□□□□□ -0.41
TRAV4-201ENST00000390426 U3KPZ7 1027 aaPredicted RBP12.46□□□□□ -0.41
TRAV4-201ENST00000390426 PALM3A6NDB9 673 aaPredicted RBP12.45□□□□□ -0.42
TRAV4-201ENST00000390426 IFIT3O14879 490 aaKnown RBP12.45□□□□□ -0.42
TRAV4-201ENST00000390426 ZBTB5O15062 677 aa12.45□□□□□ -0.42
TRAV4-201ENST00000390426 MYOGP15173 224 aa12.45□□□□□ -0.42
TRAV4-201ENST00000390426 PTPN11Q06124 597 aaPredicted RBP12.45□□□□□ -0.42
TRAV4-201ENST00000390426 SLC35G1Q2M3R5 365 aa12.45□□□□□ -0.42
TRAV4-201ENST00000390426 HOMER1Q86YM7 354 aa12.45□□□□□ -0.42
TRAV4-201ENST00000390426 RETREG2Q8NC44 543 aa12.45□□□□□ -0.42
TRAV4-201ENST00000390426 MTMR8Q96EF0 704 aa12.45□□□□□ -0.42
TRAV4-201ENST00000390426 GAS2L1Q99501 681 aaPredicted RBP12.45□□□□□ -0.42
TRAV4-201ENST00000390426 SLC28A3Q9HAS3 691 aa12.45□□□□□ -0.42
TRAV4-201ENST00000390426 SENP2Q9HC62 589 aa12.45□□□□□ -0.42
TRAV4-201ENST00000390426 PXMP2Q9NR77 195 aa12.45□□□□□ -0.42
TRAV4-201ENST00000390426 NOD1Q9Y239 953 aa12.45□□□□□ -0.42
TRAV4-201ENST00000390426 PCDHA1Q9Y5I3 950 aa12.45□□□□□ -0.42
TRAV4-201ENST00000390426 E7EWF7 191 aa12.44□□□□□ -0.42
TRAV4-201ENST00000390426 SORBS3O60504 671 aa12.44□□□□□ -0.42
TRAV4-201ENST00000390426 EIF3JO75822 258 aaKnown RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms