RNA–Protein interactions for RNA: ENST00000383282.3

NPHP3-202, Transcript of nephrocystin 3, humanhuman

TSL 1 (best) BASIC

Gene NPHP3, Length 782 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-202ENST00000383282 TTLL4Q14679 1199 aa30.87■■■□□ 2.53
NPHP3-202ENST00000383282 OTOP2Q7RTS6 562 aa30.87■■■□□ 2.53
NPHP3-202ENST00000383282 CNNM2Q9H8M5 875 aa30.87■■■□□ 2.53
NPHP3-202ENST00000383282 TRMT13Q9NUP7 481 aaKnown RBP30.87■■■□□ 2.53
NPHP3-202ENST00000383282 CXXC1Q9P0U4 656 aaPredicted RBP30.87■■■□□ 2.53
NPHP3-202ENST00000383282 TNKSO95271 1327 aa30.87■■■□□ 2.53
NPHP3-202ENST00000383282 DHX16O60231 1041 aaKnown RBP30.86■■■□□ 2.53
NPHP3-202ENST00000383282 FAM47CQ5HY64 1035 aa30.86■■■□□ 2.53
NPHP3-202ENST00000383282 MCF2L2Q86YR7 1114 aa30.86■■■□□ 2.53
NPHP3-202ENST00000383282 ADGRF4Q8IZF3 695 aa30.86■■■□□ 2.53
NPHP3-202ENST00000383282 UBAC1Q9BSL1 405 aa30.86■■■□□ 2.53
NPHP3-202ENST00000383282 ZSWIM5Q9P217 1185 aa30.86■■■□□ 2.53
NPHP3-202ENST00000383282 PARP1P09874 1014 aaKnown RBP30.85■■■□□ 2.53
NPHP3-202ENST00000383282 ENAHQ8N8S7 591 aaPredicted RBP30.85■■■□□ 2.53
NPHP3-202ENST00000383282 SCLYQ96I15 445 aa30.85■■■□□ 2.53
NPHP3-202ENST00000383282 A6NJR5 290 aa30.84■■■□□ 2.53
NPHP3-202ENST00000383282 PFKMP08237 780 aa30.84■■■□□ 2.53
NPHP3-202ENST00000383282 CYP2C9P11712 490 aa30.84■■■□□ 2.53
NPHP3-202ENST00000383282 NBPF20Q3BBV1 942 aa30.84■■■□□ 2.53
NPHP3-202ENST00000383282 NSUN6Q8TEA1 469 aaKnown RBP30.84■■■□□ 2.53
NPHP3-202ENST00000383282 COPS5Q92905 334 aa30.84■■■□□ 2.53
NPHP3-202ENST00000383282 MRPL11Q9Y3B7 192 aaKnown RBP30.84■■■□□ 2.53
NPHP3-202ENST00000383282 LAMA4Q16363 1823 aa30.84■■■□□ 2.53
NPHP3-202ENST00000383282 NFRKBQ6P4R8 1299 aa30.83■■■□□ 2.53
NPHP3-202ENST00000383282 FBXO11Q86XK2 927 aa30.83■■■□□ 2.53
NPHP3-202ENST00000383282 SLC4A7Q9Y6M7 1214 aa30.83■■■□□ 2.53
NPHP3-202ENST00000383282 ZBBXA8MT70 800 aa30.82■■■□□ 2.52
NPHP3-202ENST00000383282 QRICH1Q2TAL8 776 aa30.82■■■□□ 2.52
NPHP3-202ENST00000383282 IFIT1BQ5T764 474 aaKnown RBP30.82■■■□□ 2.52
NPHP3-202ENST00000383282 SYTL5Q8TDW5 730 aaPredicted RBP30.82■■■□□ 2.52
NPHP3-202ENST00000383282 PRDM12Q9H4Q4 367 aa30.82■■■□□ 2.52
NPHP3-202ENST00000383282 SLC28A3Q9HAS3 691 aa30.82■■■□□ 2.52
NPHP3-202ENST00000383282 PTPN11Q06124 597 aaPredicted RBP30.81■■■□□ 2.52
NPHP3-202ENST00000383282 TAAR1Q96RJ0 339 aa30.81■■■□□ 2.52
NPHP3-202ENST00000383282 IWS1Q96ST2 819 aa30.81■■■□□ 2.52
NPHP3-202ENST00000383282 VAT1LQ9HCJ6 419 aa30.81■■■□□ 2.52
NPHP3-202ENST00000383282 ARIH2O95376 493 aa30.8■■■□□ 2.52
NPHP3-202ENST00000383282 STXBP2Q15833 593 aa30.8■■■□□ 2.52
NPHP3-202ENST00000383282 SEPT14Q6ZU15 432 aa30.8■■■□□ 2.52
NPHP3-202ENST00000383282 TBC1D5Q92609 795 aa30.8■■■□□ 2.52
NPHP3-202ENST00000383282 RMDN3Q96TC7 470 aa30.8■■■□□ 2.52
NPHP3-202ENST00000383282 NKX2-4Q9H2Z4 354 aa30.8■■■□□ 2.52
NPHP3-202ENST00000383282 NOD1Q9Y239 953 aa30.8■■■□□ 2.52
NPHP3-202ENST00000383282 PRUNE2Q8WUY3 3088 aa30.79■■■□□ 2.52
NPHP3-202ENST00000383282 RETREG2Q8NC44 543 aa30.79■■■□□ 2.52
NPHP3-202ENST00000383282 SYMPKQ92797 1274 aaKnown RBP30.79■■■□□ 2.52
NPHP3-202ENST00000383282 JMJD4Q9H9V9 463 aa30.79■■■□□ 2.52
NPHP3-202ENST00000383282 GH1P01241 217 aa30.78■■■□□ 2.52
NPHP3-202ENST00000383282 ARHGEF16Q5VV41 709 aa30.78■■■□□ 2.52
NPHP3-202ENST00000383282 CCDC62Q6P9F0 684 aa30.78■■■□□ 2.52
NPHP3-202ENST00000383282 DEFB128Q7Z7B8 93 aa30.78■■■□□ 2.52
NPHP3-202ENST00000383282 ACTN1P12814 892 aa30.77■■■□□ 2.52
NPHP3-202ENST00000383282 RFC2P35250 354 aa30.77■■■□□ 2.52
NPHP3-202ENST00000383282 TRDNQ13061 729 aa30.77■■■□□ 2.52
NPHP3-202ENST00000383282 BFSP2Q13515 415 aa30.77■■■□□ 2.52
NPHP3-202ENST00000383282 USP38Q8NB14 1042 aa30.77■■■□□ 2.52
NPHP3-202ENST00000383282 AMNQ9BXJ7 453 aa30.77■■■□□ 2.52
NPHP3-202ENST00000383282 COL20A1Q9P218 1284 aa30.77■■■□□ 2.52
NPHP3-202ENST00000383282 YBX2Q9Y2T7 364 aaKnown RBP30.77■■■□□ 2.52
NPHP3-202ENST00000383282 VCANP13611 3396 aa30.76■■■□□ 2.52
NPHP3-202ENST00000383282 SCN10AQ9Y5Y9 1956 aa30.76■■■□□ 2.51
NPHP3-202ENST00000383282 PITPNM1O00562 1244 aa30.76■■■□□ 2.51
NPHP3-202ENST00000383282 CHMP4BP1P59074 171 aa30.76■■■□□ 2.51
NPHP3-202ENST00000383282 LY6KQ17RY6 165 aa30.76■■■□□ 2.51
NPHP3-202ENST00000383282 AFG1LQ8WV93 481 aa30.76■■■□□ 2.51
NPHP3-202ENST00000383282 CFBP00751 764 aa30.75■■■□□ 2.51
NPHP3-202ENST00000383282 ATP2A2P16615 1042 aaKnown RBP30.75■■■□□ 2.51
NPHP3-202ENST00000383282 PPM1EQ8WY54 764 aa30.75■■■□□ 2.51
NPHP3-202ENST00000383282 PCDHA11Q9Y5I1 949 aa30.75■■■□□ 2.51
NPHP3-202ENST00000383282 MMP3P08254 477 aa30.74■■■□□ 2.51
NPHP3-202ENST00000383282 EIF2AK2P19525 551 aaKnown RBP30.74■■■□□ 2.51
NPHP3-202ENST00000383282 CASTP20810 708 aaKnown RBP30.74■■■□□ 2.51
NPHP3-202ENST00000383282 RABGGTBP53611 331 aa30.74■■■□□ 2.51
NPHP3-202ENST00000383282 TTC22Q5TAA0 569 aa30.74■■■□□ 2.51
NPHP3-202ENST00000383282 PPP2R2DQ66LE6 453 aa30.74■■■□□ 2.51
NPHP3-202ENST00000383282 CHST3Q7LGC8 479 aa30.74■■■□□ 2.51
NPHP3-202ENST00000383282 CCDC155Q8N6L0 562 aa30.74■■■□□ 2.51
NPHP3-202ENST00000383282 PPP1R13LQ8WUF5 828 aa30.74■■■□□ 2.51
NPHP3-202ENST00000383282 RUFY2Q8WXA3 655 aa30.74■■■□□ 2.51
NPHP3-202ENST00000383282 VWCEQ96DN2 955 aa30.74■■■□□ 2.51
NPHP3-202ENST00000383282 IL25Q9H293 177 aa30.74■■■□□ 2.51
NPHP3-202ENST00000383282 KLRF2D3W0D1 207 aa30.73■■■□□ 2.51
NPHP3-202ENST00000383282 EIF3JO75822 258 aaKnown RBP30.73■■■□□ 2.51
NPHP3-202ENST00000383282 IGFBP4P22692 258 aa30.73■■■□□ 2.51
NPHP3-202ENST00000383282 STAG2Q8N3U4 1231 aa30.73■■■□□ 2.51
NPHP3-202ENST00000383282 IQCF3P0C7M6 154 aa30.72■■■□□ 2.51
NPHP3-202ENST00000383282 ARHGAP1Q07960 439 aa30.72■■■□□ 2.51
NPHP3-202ENST00000383282 SEC23AQ15436 765 aa30.72■■■□□ 2.51
NPHP3-202ENST00000383282 TJAP1Q5JTD0 557 aa30.72■■■□□ 2.51
NPHP3-202ENST00000383282 PXMP2Q9NR77 195 aa30.72■■■□□ 2.51
NPHP3-202ENST00000383282 MAP3K20Q9NYL2 800 aaKnown RBP30.72■■■□□ 2.51
NPHP3-202ENST00000383282 ZBTB5O15062 677 aa30.71■■■□□ 2.51
NPHP3-202ENST00000383282 NR3C2P08235 984 aa30.71■■■□□ 2.51
NPHP3-202ENST00000383282 GSPT1P15170 499 aaKnown RBP30.71■■■□□ 2.51
NPHP3-202ENST00000383282 HSD17B4P51659 736 aa30.71■■■□□ 2.51
NPHP3-202ENST00000383282 PTGISQ16647 500 aa30.71■■■□□ 2.51
NPHP3-202ENST00000383282 DGKDQ16760 1214 aa30.71■■■□□ 2.51
NPHP3-202ENST00000383282 CYB5R4Q7L1T6 521 aa30.71■■■□□ 2.51
NPHP3-202ENST00000383282 FTOQ9C0B1 505 aaKnown RBP eCLIP30.71■■■□□ 2.51
NPHP3-202ENST00000383282 MRVI1Q9Y6F6 885 aa30.71■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms