RNA–Protein interactions for RNA: ENST00000380707.8

SMN1-202, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-202ENST00000380707 RMDN3Q96TC7 470 aa14.52□□□□□ -0.08
SMN1-202ENST00000380707 SLC5A4Q9NY91 659 aa14.52□□□□□ -0.08
SMN1-202ENST00000380707 DIS3Q9Y2L1 958 aaKnown RBP14.52□□□□□ -0.08
SMN1-202ENST00000380707 KIF3AQ9Y496 699 aa14.52□□□□□ -0.08
SMN1-202ENST00000380707 PTCH2Q9Y6C5 1203 aa14.52□□□□□ -0.08
SMN1-202ENST00000380707 M0R2N6 131 aa14.51□□□□□ -0.09
SMN1-202ENST00000380707 MMP1P03956 469 aa14.51□□□□□ -0.09
SMN1-202ENST00000380707 TRIM29Q14134 588 aa14.51□□□□□ -0.09
SMN1-202ENST00000380707 JAKMIP3Q5VZ66 844 aa14.51□□□□□ -0.09
SMN1-202ENST00000380707 GALNT17Q6IS24 598 aa14.51□□□□□ -0.09
SMN1-202ENST00000380707 TEX2Q8IWB9 1127 aa14.51□□□□□ -0.09
SMN1-202ENST00000380707 BLIDQ8IZY5 108 aa14.51□□□□□ -0.09
SMN1-202ENST00000380707 REXO1Q8N1G1 1221 aaKnown RBP14.51□□□□□ -0.09
SMN1-202ENST00000380707 DAGLBQ8NCG7 672 aa14.51□□□□□ -0.09
SMN1-202ENST00000380707 DNERQ8NFT8 737 aa14.51□□□□□ -0.09
SMN1-202ENST00000380707 BICD2Q8TD16 824 aa14.51□□□□□ -0.09
SMN1-202ENST00000380707 OXER1Q8TDS5 423 aa14.51□□□□□ -0.09
SMN1-202ENST00000380707 ADCY3O60266 1144 aa14.51□□□□□ -0.09
SMN1-202ENST00000380707 IGHA2P01877 340 aa14.51□□□□□ -0.09
SMN1-202ENST00000380707 ELNP15502 786 aa14.51□□□□□ -0.09
SMN1-202ENST00000380707 ANP32AP39687 249 aaKnown RBP14.51□□□□□ -0.09
SMN1-202ENST00000380707 ALDH5A1P51649 535 aaPredicted RBP14.51□□□□□ -0.09
SMN1-202ENST00000380707 LARP1BQ659C4 914 aaKnown RBP14.51□□□□□ -0.09
SMN1-202ENST00000380707 ZNF467Q7Z7K2 595 aaPredicted RBP14.51□□□□□ -0.09
SMN1-202ENST00000380707 NSUN6Q8TEA1 469 aaKnown RBP14.51□□□□□ -0.09
SMN1-202ENST00000380707 TRIB2Q92519 343 aa14.51□□□□□ -0.09
SMN1-202ENST00000380707 PGBD1Q96JS3 809 aa14.51□□□□□ -0.09
SMN1-202ENST00000380707 PXMP2Q9NR77 195 aa14.51□□□□□ -0.09
SMN1-202ENST00000380707 ADD3Q9UEY8 706 aaKnown RBP14.51□□□□□ -0.09
SMN1-202ENST00000380707 PCDHA6Q9UN73 950 aa14.51□□□□□ -0.09
SMN1-202ENST00000380707 PCDHA8Q9Y5H6 950 aa14.51□□□□□ -0.09
SMN1-202ENST00000380707 PLXNA1Q9UIW2 1896 aa14.5□□□□□ -0.09
SMN1-202ENST00000380707 SPDYE3A6NKU9 549 aa14.5□□□□□ -0.09
SMN1-202ENST00000380707 BTBD18B2RXH4 712 aa14.5□□□□□ -0.09
SMN1-202ENST00000380707 EIF2AK2P19525 551 aaKnown RBP14.5□□□□□ -0.09
SMN1-202ENST00000380707 UBXN2AP68543 259 aa14.5□□□□□ -0.09
SMN1-202ENST00000380707 NR5A1Q13285 461 aa14.5□□□□□ -0.09
SMN1-202ENST00000380707 ARHGEF16Q5VV41 709 aa14.5□□□□□ -0.09
SMN1-202ENST00000380707 OLFML2BQ68BL8 750 aa14.5□□□□□ -0.09
SMN1-202ENST00000380707 MAMDC4Q6UXC1 1216 aa14.5□□□□□ -0.09
SMN1-202ENST00000380707 TINF2Q9BSI4 451 aa14.5□□□□□ -0.09
SMN1-202ENST00000380707 FRMPD4Q14CM0 1322 aa14.49□□□□□ -0.09
SMN1-202ENST00000380707 RPTORQ8N122 1335 aa14.49□□□□□ -0.09
SMN1-202ENST00000380707 FOSP01100 380 aaPredicted RBP14.49□□□□□ -0.09
SMN1-202ENST00000380707 SYT1P21579 422 aa14.49□□□□□ -0.09
SMN1-202ENST00000380707 CYP2C19P33261 490 aa14.49□□□□□ -0.09
SMN1-202ENST00000380707 KRT2P35908 639 aa14.49□□□□□ -0.09
SMN1-202ENST00000380707 AP3B2Q13367 1082 aa14.49□□□□□ -0.09
SMN1-202ENST00000380707 PGM5Q15124 567 aa14.49□□□□□ -0.09
SMN1-202ENST00000380707 DIS3L2Q8IYB7 885 aaKnown RBP14.49□□□□□ -0.09
SMN1-202ENST00000380707 IL31RAQ8NI17 732 aa14.49□□□□□ -0.09
SMN1-202ENST00000380707 PXYLP1Q8TE99 480 aa14.49□□□□□ -0.09
SMN1-202ENST00000380707 PDCD2LQ9BRP1 358 aa14.49□□□□□ -0.09
SMN1-202ENST00000380707 ANO3Q9BYT9 981 aa14.49□□□□□ -0.09
SMN1-202ENST00000380707 SYNGAP1Q96PV0 1343 aa14.48□□□□□ -0.09
SMN1-202ENST00000380707 ASB14A6NK59 587 aa14.48□□□□□ -0.09
SMN1-202ENST00000380707 SNAI1O95863 264 aaPredicted RBP14.48□□□□□ -0.09
SMN1-202ENST00000380707 NR3C2P08235 984 aa14.48□□□□□ -0.09
SMN1-202ENST00000380707 EDNRBP24530 442 aa14.48□□□□□ -0.09
SMN1-202ENST00000380707 GRK4P32298 578 aa14.48□□□□□ -0.09
SMN1-202ENST00000380707 TRIM32Q13049 653 aa14.48□□□□□ -0.09
SMN1-202ENST00000380707 EARS2Q5JPH6 523 aaKnown RBP14.48□□□□□ -0.09
SMN1-202ENST00000380707 ARMCX2Q7L311 632 aa14.48□□□□□ -0.09
SMN1-202ENST00000380707 TRMT44Q8IYL2 757 aaKnown RBP14.48□□□□□ -0.09
SMN1-202ENST00000380707 MSL3Q8N5Y2 521 aaKnown RBP14.48□□□□□ -0.09
SMN1-202ENST00000380707 MORC4Q8TE76 937 aa14.48□□□□□ -0.09
SMN1-202ENST00000380707 TNFRSF25Q93038 417 aa14.48□□□□□ -0.09
SMN1-202ENST00000380707 IWS1Q96ST2 819 aa14.48□□□□□ -0.09
SMN1-202ENST00000380707 BRMS1Q9HCU9 246 aa14.48□□□□□ -0.09
SMN1-202ENST00000380707 DNAH12Q6ZR08 3092 aa14.48□□□□□ -0.09
SMN1-202ENST00000380707 H3BQV1 296 aa14.47□□□□□ -0.09
SMN1-202ENST00000380707 PDCP20941 246 aa14.47□□□□□ -0.09
SMN1-202ENST00000380707 SAFBQ15424 915 aaKnown RBP eCLIP14.47□□□□□ -0.09
SMN1-202ENST00000380707 PKN2Q16513 984 aaKnown RBP14.47□□□□□ -0.09
SMN1-202ENST00000380707 IFFO2Q5TF58 517 aa14.47□□□□□ -0.09
SMN1-202ENST00000380707 MCTP2Q6DN12 878 aa14.47□□□□□ -0.09
SMN1-202ENST00000380707 FBXO46Q6PJ61 603 aaPredicted RBP14.47□□□□□ -0.09
SMN1-202ENST00000380707 VSIG10LQ86VR7 867 aa14.47□□□□□ -0.09
SMN1-202ENST00000380707 SLAIN1Q8ND83 568 aa14.47□□□□□ -0.09
SMN1-202ENST00000380707 SH3TC2Q8TF17 1288 aa14.47□□□□□ -0.09
SMN1-202ENST00000380707 ZFP91Q96JP5 570 aaPredicted RBP14.47□□□□□ -0.09
SMN1-202ENST00000380707 LOC102724159A0A0B4J2E5 919 aa14.46□□□□□ -0.09
SMN1-202ENST00000380707 FAM205CA6NFA0 338 aa14.46□□□□□ -0.09
SMN1-202ENST00000380707 KIF28PB7ZC32 967 aa14.46□□□□□ -0.09
SMN1-202ENST00000380707 HMGCRP04035 888 aa14.46□□□□□ -0.09
SMN1-202ENST00000380707 MYCLP12524 364 aaPredicted RBP14.46□□□□□ -0.09
SMN1-202ENST00000380707 SREBF1P36956 1147 aa14.46□□□□□ -0.09
SMN1-202ENST00000380707 MRPS9P82933 396 aaKnown RBP14.46□□□□□ -0.09
SMN1-202ENST00000380707 CACNB2Q08289 660 aaPredicted RBP14.46□□□□□ -0.09
SMN1-202ENST00000380707 PDE4DQ08499 809 aa14.46□□□□□ -0.09
SMN1-202ENST00000380707 PWP2Q15269 919 aaKnown RBP14.46□□□□□ -0.09
SMN1-202ENST00000380707 PRAMEF19Q5SWL8 479 aa14.46□□□□□ -0.09
SMN1-202ENST00000380707 PIK3AP1Q6ZUJ8 805 aa14.46□□□□□ -0.09
SMN1-202ENST00000380707 CRYGNQ8WXF5 182 aa14.46□□□□□ -0.09
SMN1-202ENST00000380707 KATNBL1Q9H079 304 aa14.46□□□□□ -0.09
SMN1-202ENST00000380707 FOXP1Q9H334 677 aaPredicted RBP14.46□□□□□ -0.09
SMN1-202ENST00000380707 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.46□□□□□ -0.09
SMN1-202ENST00000380707 CCDC194A0A1B0GVG4 234 aa14.46□□□□□ -0.1
SMN1-202ENST00000380707 VPS37CA5D8V6 355 aaPredicted RBP14.46□□□□□ -0.1
SMN1-202ENST00000380707 B4DLN1 442 aa14.46□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms