RNA–Protein interactions for RNA: ENST00000379826.4

SMAD9-202, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMAD9, Length 5,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-202ENST00000379826 EPHB4P54760 987 aa12.56□□□□□ -0.4
SMAD9-202ENST00000379826 PDCLQ13371 301 aa12.56□□□□□ -0.4
SMAD9-202ENST00000379826 EARS2Q5JPH6 523 aaKnown RBP12.56□□□□□ -0.4
SMAD9-202ENST00000379826 LCMT1Q9UIC8 334 aa12.56□□□□□ -0.4
SMAD9-202ENST00000379826 GOLGA6L10A0A0M3HER8 536 aa12.56□□□□□ -0.4
SMAD9-202ENST00000379826 TCP1P17987 556 aaKnown RBP12.56□□□□□ -0.4
SMAD9-202ENST00000379826 MDM2Q00987 491 aaPredicted RBP12.56□□□□□ -0.4
SMAD9-202ENST00000379826 EP400NLQ6ZTU2 488 aa12.56□□□□□ -0.4
SMAD9-202ENST00000379826 CCDC84Q86UT8 332 aaPredicted RBP12.56□□□□□ -0.4
SMAD9-202ENST00000379826 LRRC47Q8N1G4 583 aaKnown RBP12.56□□□□□ -0.4
SMAD9-202ENST00000379826 DPH5Q9H2P9 285 aa12.56□□□□□ -0.4
SMAD9-202ENST00000379826 PANK4Q9NVE7 773 aa12.56□□□□□ -0.4
SMAD9-202ENST00000379826 TMEM51Q9NW97 253 aa12.56□□□□□ -0.4
SMAD9-202ENST00000379826 HPCAL4Q9UM19 191 aa12.56□□□□□ -0.4
SMAD9-202ENST00000379826 OVOS2A0A0G2JMS6 1433 aa12.56□□□□□ -0.4
SMAD9-202ENST00000379826 CDHR2Q9BYE9 1310 aa12.56□□□□□ -0.4
SMAD9-202ENST00000379826 ZNF18P17022 549 aa12.55□□□□□ -0.4
SMAD9-202ENST00000379826 GBP2P32456 591 aaPredicted RBP12.55□□□□□ -0.4
SMAD9-202ENST00000379826 PFKFB3Q16875 520 aaPredicted RBP12.55□□□□□ -0.4
SMAD9-202ENST00000379826 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.55□□□□□ -0.46e-9■■■■■ 134.6
SMAD9-202ENST00000379826 JRKLQ9Y4A0 524 aa12.55□□□□□ -0.4
SMAD9-202ENST00000379826 HGSO14964 777 aaPredicted RBP12.55□□□□□ -0.4
SMAD9-202ENST00000379826 MYOCDQ8IZQ8 938 aa12.55□□□□□ -0.4
SMAD9-202ENST00000379826 TBCKQ8TEA7 893 aa12.55□□□□□ -0.4
SMAD9-202ENST00000379826 LRRC1Q9BTT6 524 aa12.55□□□□□ -0.4
SMAD9-202ENST00000379826 STAG2Q8N3U4 1231 aa12.55□□□□□ -0.4
SMAD9-202ENST00000379826 FAM133AQ8N9E0 248 aa12.55□□□□□ -0.4
SMAD9-202ENST00000379826 LMBR1Q8WVP7 490 aa12.55□□□□□ -0.4
SMAD9-202ENST00000379826 TBC1D5Q92609 795 aa12.55□□□□□ -0.4
SMAD9-202ENST00000379826 WDR70Q9NW82 654 aa12.55□□□□□ -0.4
SMAD9-202ENST00000379826 PACSIN2Q9UNF0 486 aaPredicted RBP12.55□□□□□ -0.4
SMAD9-202ENST00000379826 LRRC53A6NM62 1247 aa12.55□□□□□ -0.4
SMAD9-202ENST00000379826 CCNE1P24864 410 aa12.55□□□□□ -0.4
SMAD9-202ENST00000379826 VWA3BQ502W6 1294 aa12.55□□□□□ -0.4
SMAD9-202ENST00000379826 FAM184BQ9ULE4 1060 aa12.55□□□□□ -0.4
SMAD9-202ENST00000379826 NAA35Q5VZE5 725 aa12.54□□□□□ -0.4
SMAD9-202ENST00000379826 TMC4Q7Z404 712 aa12.54□□□□□ -0.4
SMAD9-202ENST00000379826 DAAM2Q86T65 1068 aa12.54□□□□□ -0.4
SMAD9-202ENST00000379826 CCDC170Q8IYT3 715 aa12.54□□□□□ -0.4
SMAD9-202ENST00000379826 CNKSR1Q969H4 720 aa12.54□□□□□ -0.4
SMAD9-202ENST00000379826 PIGSQ96S52 555 aa12.54□□□□□ -0.4
SMAD9-202ENST00000379826 PAIP2Q9BPZ3 127 aaKnown RBP12.54□□□□□ -0.4
SMAD9-202ENST00000379826 UTP11Q9Y3A2 253 aaKnown RBP12.54□□□□□ -0.4
SMAD9-202ENST00000379826 LTN1O94822 1766 aa12.54□□□□□ -0.4
SMAD9-202ENST00000379826 CHMP2AO43633 222 aa12.54□□□□□ -0.4
SMAD9-202ENST00000379826 DPP8Q6V1X1 898 aaPredicted RBP12.54□□□□□ -0.4
SMAD9-202ENST00000379826 MS4A14Q96JA4 679 aa12.54□□□□□ -0.4
SMAD9-202ENST00000379826 IFT88Q13099 833 aa12.54□□□□□ -0.4
SMAD9-202ENST00000379826 ANKRD40Q6AI12 368 aa12.54□□□□□ -0.4
SMAD9-202ENST00000379826 USP17L2Q6R6M4 530 aa12.54□□□□□ -0.4
SMAD9-202ENST00000379826 CUL5Q93034 780 aa12.54□□□□□ -0.4
SMAD9-202ENST00000379826 PLA2G12BQ9BX93 195 aa12.54□□□□□ -0.4
SMAD9-202ENST00000379826 NDST4Q9H3R1 872 aa12.54□□□□□ -0.4
SMAD9-202ENST00000379826 FAM217BQ9NTX9 383 aaPredicted RBP12.54□□□□□ -0.4
SMAD9-202ENST00000379826 TSKSQ9UJT2 592 aa12.54□□□□□ -0.4
SMAD9-202ENST00000379826 NWD1Q149M9 1564 aa12.54□□□□□ -0.4
SMAD9-202ENST00000379826 ABL1P00519 1130 aa12.54□□□□□ -0.4
SMAD9-202ENST00000379826 LRRC31Q6UY01 552 aa12.54□□□□□ -0.4
SMAD9-202ENST00000379826 GPBP1Q86WP2 473 aa12.54□□□□□ -0.4
SMAD9-202ENST00000379826 PROCA1Q8NCQ7 364 aaPredicted RBP12.54□□□□□ -0.4
SMAD9-202ENST00000379826 ERMNQ8TAM6 284 aa12.54□□□□□ -0.4
SMAD9-202ENST00000379826 LARP4BQ92615 738 aaKnown RBP12.54□□□□□ -0.4
SMAD9-202ENST00000379826 GPR101Q96P66 508 aaPredicted RBP12.54□□□□□ -0.4
SMAD9-202ENST00000379826 EHD2Q9NZN4 543 aa12.54□□□□□ -0.4
SMAD9-202ENST00000379826 ITIH6Q6UXX5 1313 aa12.54□□□□□ -0.4
SMAD9-202ENST00000379826 AP1M1Q9BXS5 423 aa12.54□□□□□ -0.4
SMAD9-202ENST00000379826 CAPN11Q9UMQ6 739 aa12.54□□□□□ -0.4
SMAD9-202ENST00000379826 DUSP10Q9Y6W6 482 aa12.54□□□□□ -0.4
SMAD9-202ENST00000379826 RGPD1P0DJD0 1748 aa12.53□□□□□ -0.4
SMAD9-202ENST00000379826 GSTTP1A0A1W2PQM5 241 aa12.53□□□□□ -0.4
SMAD9-202ENST00000379826 IL6STP40189 918 aaPredicted RBP12.53□□□□□ -0.4
SMAD9-202ENST00000379826 PEX26Q7Z412 305 aa12.53□□□□□ -0.4
SMAD9-202ENST00000379826 CCDC26Q8TAB7 109 aa12.53□□□□□ -0.4
SMAD9-202ENST00000379826 COG1Q8WTW3 980 aa12.53□□□□□ -0.4
SMAD9-202ENST00000379826 U2AF1L4Q8WU68 220 aaKnown RBP12.53□□□□□ -0.4
SMAD9-202ENST00000379826 COA7Q96BR5 231 aa12.53□□□□□ -0.4
SMAD9-202ENST00000379826 KRIT1O00522 736 aa12.53□□□□□ -0.4
SMAD9-202ENST00000379826 CYP19A1P11511 503 aaPredicted RBP12.53□□□□□ -0.4
SMAD9-202ENST00000379826 ABCB4P21439 1286 aa12.53□□□□□ -0.4
SMAD9-202ENST00000379826 ARFGAP2Q8N6H7 521 aa12.53□□□□□ -0.4
SMAD9-202ENST00000379826 UHMK1Q8TAS1 419 aaKnown RBP12.53□□□□□ -0.4
SMAD9-202ENST00000379826 OSBPL9Q96SU4 736 aa12.53□□□□□ -0.4
SMAD9-202ENST00000379826 A0A087WUV0 522 aaPredicted RBP12.53□□□□□ -0.4
SMAD9-202ENST00000379826 VIMP08670 466 aaKnown RBP12.53□□□□□ -0.4
SMAD9-202ENST00000379826 DEFB132Q7Z7B7 95 aa12.53□□□□□ -0.4
SMAD9-202ENST00000379826 CCDC155Q8N6L0 562 aa12.53□□□□□ -0.4
SMAD9-202ENST00000379826 RASAL2Q9UJF2 1139 aa12.53□□□□□ -0.4
SMAD9-202ENST00000379826 FAM169AQ9Y6X4 670 aa12.53□□□□□ -0.4
SMAD9-202ENST00000379826 XDHP47989 1333 aa12.53□□□□□ -0.4
SMAD9-202ENST00000379826 MYCP01106 439 aaPredicted RBP12.53□□□□□ -0.4
SMAD9-202ENST00000379826 ARHGAP25P42331 645 aa12.53□□□□□ -0.4
SMAD9-202ENST00000379826 TXNRD1Q16881 649 aa12.53□□□□□ -0.4
SMAD9-202ENST00000379826 ARL6IP4Q66PJ3 421 aaKnown RBP12.53□□□□□ -0.4
SMAD9-202ENST00000379826 ANKS4BQ8N8V4 417 aa12.53□□□□□ -0.4
SMAD9-202ENST00000379826 CABS1Q96KC9 395 aa12.53□□□□□ -0.4
SMAD9-202ENST00000379826 PCDHA6Q9UN73 950 aa12.53□□□□□ -0.4
SMAD9-202ENST00000379826 PCDHA8Q9Y5H6 950 aa12.53□□□□□ -0.4
SMAD9-202ENST00000379826 SPATA31A3Q5VYP0 1347 aa12.52□□□□□ -0.4
SMAD9-202ENST00000379826 PALMO75781 387 aa12.52□□□□□ -0.4
SMAD9-202ENST00000379826 UFL1O94874 794 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms