RNA–Protein interactions for RNA: ENST00000379236.3

TNFRSF4-201, Transcript of TNF receptor superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF4, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-201ENST00000379236 IGDCC4Q8TDY8 1250 aa28.62■■■□□ 2.17
TNFRSF4-201ENST00000379236 PIGSQ96S52 555 aa28.62■■■□□ 2.17
TNFRSF4-201ENST00000379236 IWS1Q96ST2 819 aa28.62■■■□□ 2.17
TNFRSF4-201ENST00000379236 SEZ6LQ9BYH1 1024 aa28.62■■■□□ 2.17
TNFRSF4-201ENST00000379236 CCDC69A6NI79 296 aa28.61■■■□□ 2.17
TNFRSF4-201ENST00000379236 TXNP10599 105 aaKnown RBP28.61■■■□□ 2.17
TNFRSF4-201ENST00000379236 KIF5BP33176 963 aa28.61■■■□□ 2.17
TNFRSF4-201ENST00000379236 TROAPQ12815 778 aa28.61■■■□□ 2.17
TNFRSF4-201ENST00000379236 STXBP2Q15833 593 aa28.61■■■□□ 2.17
TNFRSF4-201ENST00000379236 MTMR8Q96EF0 704 aa28.61■■■□□ 2.17
TNFRSF4-201ENST00000379236 TMEM87BQ96K49 555 aa28.61■■■□□ 2.17
TNFRSF4-201ENST00000379236 MTA3Q9BTC8 594 aa28.61■■■□□ 2.17
TNFRSF4-201ENST00000379236 CDC45O75419 566 aa28.6■■■□□ 2.17
TNFRSF4-201ENST00000379236 DDAH1O94760 285 aa28.6■■■□□ 2.17
TNFRSF4-201ENST00000379236 MYL3P08590 195 aa28.6■■■□□ 2.17
TNFRSF4-201ENST00000379236 EIF2AK2P19525 551 aaKnown RBP28.6■■■□□ 2.17
TNFRSF4-201ENST00000379236 SHHQ15465 462 aa28.6■■■□□ 2.17
TNFRSF4-201ENST00000379236 ZNF654Q8IZM8 581 aa28.6■■■□□ 2.17
TNFRSF4-201ENST00000379236 TMTC2Q8N394 836 aa28.6■■■□□ 2.17
TNFRSF4-201ENST00000379236 RIOX1Q9H6W3 641 aa28.6■■■□□ 2.17
TNFRSF4-201ENST00000379236 LY9Q9HBG7 655 aa28.6■■■□□ 2.17
TNFRSF4-201ENST00000379236 MAP3K20Q9NYL2 800 aaKnown RBP28.6■■■□□ 2.17
TNFRSF4-201ENST00000379236 COL20A1Q9P218 1284 aa28.6■■■□□ 2.17
TNFRSF4-201ENST00000379236 MYH7BA7E2Y1 1941 aa28.6■■■□□ 2.17
TNFRSF4-201ENST00000379236 TIMP1P01033 207 aa28.59■■■□□ 2.17
TNFRSF4-201ENST00000379236 NEFLP07196 543 aa28.59■■■□□ 2.17
TNFRSF4-201ENST00000379236 ITGB8P26012 769 aa28.59■■■□□ 2.17
TNFRSF4-201ENST00000379236 SEPT14Q6ZU15 432 aa28.59■■■□□ 2.17
TNFRSF4-201ENST00000379236 FAM126BQ8IXS8 530 aa28.59■■■□□ 2.17
TNFRSF4-201ENST00000379236 PNMA6FA0A0J9YX94 578 aa28.58■■■□□ 2.17
TNFRSF4-201ENST00000379236 PPP1R11O60927 126 aaPredicted RBP28.58■■■□□ 2.17
TNFRSF4-201ENST00000379236 NECTIN1Q15223 517 aa28.58■■■□□ 2.17
TNFRSF4-201ENST00000379236 SAMD3Q8N6K7 520 aa28.58■■■□□ 2.17
TNFRSF4-201ENST00000379236 PIBF1Q8WXW3 757 aa28.58■■■□□ 2.17
TNFRSF4-201ENST00000379236 TBX21Q9UL17 535 aa28.58■■■□□ 2.17
TNFRSF4-201ENST00000379236 HSD17B4P51659 736 aa28.57■■■□□ 2.16
TNFRSF4-201ENST00000379236 PSMC6P62333 389 aa28.57■■■□□ 2.16
TNFRSF4-201ENST00000379236 C9orf50Q5SZB4 431 aa28.57■■■□□ 2.16
TNFRSF4-201ENST00000379236 DEFB123Q8N688 67 aa28.57■■■□□ 2.16
TNFRSF4-201ENST00000379236 MAP3K14Q99558 947 aa28.57■■■□□ 2.16
TNFRSF4-201ENST00000379236 MYL10Q9BUA6 226 aa28.57■■■□□ 2.16
TNFRSF4-201ENST00000379236 PPP1R12CQ9BZL4 782 aa28.57■■■□□ 2.16
TNFRSF4-201ENST00000379236 PXMP2Q9NR77 195 aa28.57■■■□□ 2.16
TNFRSF4-201ENST00000379236 SH2B2O14492 632 aaPredicted RBP28.56■■■□□ 2.16
TNFRSF4-201ENST00000379236 TMEM199Q8N511 208 aa28.56■■■□□ 2.16
TNFRSF4-201ENST00000379236 COPS5Q92905 334 aa28.56■■■□□ 2.16
TNFRSF4-201ENST00000379236 MTG1Q9BT17 334 aaPredicted RBP28.56■■■□□ 2.16
TNFRSF4-201ENST00000379236 SEC63Q9UGP8 760 aaKnown RBP28.56■■■□□ 2.16
TNFRSF4-201ENST00000379236 GCOM1H8Y6P7 765 aaPredicted RBP28.55■■■□□ 2.16
TNFRSF4-201ENST00000379236 CYTH3O43739 400 aa28.55■■■□□ 2.16
TNFRSF4-201ENST00000379236 KPNA6O60684 536 aa28.55■■■□□ 2.16
TNFRSF4-201ENST00000379236 POLR2MP0CAP2 368 aa28.55■■■□□ 2.16
TNFRSF4-201ENST00000379236 CALM1P0DP23 149 aa28.55■■■□□ 2.16
TNFRSF4-201ENST00000379236 CALM2P0DP24 149 aa28.55■■■□□ 2.16
TNFRSF4-201ENST00000379236 CALM3P0DP25 149 aa28.55■■■□□ 2.16
TNFRSF4-201ENST00000379236 GNAQP50148 359 aa28.55■■■□□ 2.16
TNFRSF4-201ENST00000379236 PPIGQ13427 754 aaKnown RBP eCLIP28.55■■■□□ 2.16
TNFRSF4-201ENST00000379236 MFSD5Q6N075 450 aa28.55■■■□□ 2.16
TNFRSF4-201ENST00000379236 SLC43A3Q8NBI5 491 aa28.55■■■□□ 2.16
TNFRSF4-201ENST00000379236 RRP36Q96EU6 259 aaKnown RBP28.55■■■□□ 2.16
TNFRSF4-201ENST00000379236 RNPC3Q96LT9 517 aaKnown RBP28.55■■■□□ 2.16
TNFRSF4-201ENST00000379236 LZTS2Q9BRK4 669 aa28.55■■■□□ 2.16
TNFRSF4-201ENST00000379236 OPLAHO14841 1288 aa28.54■■■□□ 2.16
TNFRSF4-201ENST00000379236 EIF3JO75822 258 aaKnown RBP28.54■■■□□ 2.16
TNFRSF4-201ENST00000379236 NR3C2P08235 984 aa28.54■■■□□ 2.16
TNFRSF4-201ENST00000379236 MYCLP12524 364 aaPredicted RBP28.54■■■□□ 2.16
TNFRSF4-201ENST00000379236 HOXA13P31271 388 aaPredicted RBP28.54■■■□□ 2.16
TNFRSF4-201ENST00000379236 PURAQ00577 322 aaKnown RBP28.54■■■□□ 2.16
TNFRSF4-201ENST00000379236 SCN10AQ9Y5Y9 1956 aa28.53■■■□□ 2.16
TNFRSF4-201ENST00000379236 ARIH2O95376 493 aa28.53■■■□□ 2.16
TNFRSF4-201ENST00000379236 GH1P01241 217 aa28.53■■■□□ 2.16
TNFRSF4-201ENST00000379236 CD4P01730 458 aa28.53■■■□□ 2.16
TNFRSF4-201ENST00000379236 GHRHRQ02643 423 aa28.53■■■□□ 2.16
TNFRSF4-201ENST00000379236 SLC35G1Q2M3R5 365 aa28.53■■■□□ 2.16
TNFRSF4-201ENST00000379236 SPZ1Q9BXG8 430 aa28.53■■■□□ 2.16
TNFRSF4-201ENST00000379236 SLC12A7Q9Y666 1083 aa28.53■■■□□ 2.16
TNFRSF4-201ENST00000379236 MRVI1Q9Y6F6 885 aa28.53■■■□□ 2.16
TNFRSF4-201ENST00000379236 LIFRP42702 1097 aa28.52■■■□□ 2.16
TNFRSF4-201ENST00000379236 LY6KQ17RY6 165 aa28.52■■■□□ 2.16
TNFRSF4-201ENST00000379236 FAM47CQ5HY64 1035 aa28.52■■■□□ 2.16
TNFRSF4-201ENST00000379236 SYNE3Q6ZMZ3 975 aa28.52■■■□□ 2.16
TNFRSF4-201ENST00000379236 Q7L0L9 218 aa28.52■■■□□ 2.16
TNFRSF4-201ENST00000379236 FCHSD1Q86WN1 690 aa28.52■■■□□ 2.16
TNFRSF4-201ENST00000379236 LRRC2Q9BYS8 371 aa28.52■■■□□ 2.16
TNFRSF4-201ENST00000379236 HIPK3Q9H422 1215 aa28.52■■■□□ 2.16
TNFRSF4-201ENST00000379236 LAMA2P24043 3122 aaKnown RBP28.52■■■□□ 2.16
TNFRSF4-201ENST00000379236 GRIN2DO15399 1336 aa28.51■■■□□ 2.15
TNFRSF4-201ENST00000379236 A6NJR5 290 aa28.51■■■□□ 2.15
TNFRSF4-201ENST00000379236 CCDC62Q6P9F0 684 aa28.51■■■□□ 2.15
TNFRSF4-201ENST00000379236 NEK1Q96PY6 1258 aa28.51■■■□□ 2.15
TNFRSF4-201ENST00000379236 PDCD2LQ9BRP1 358 aa28.51■■■□□ 2.15
TNFRSF4-201ENST00000379236 B4GALT4O60513 344 aa28.5■■■□□ 2.15
TNFRSF4-201ENST00000379236 SUPT20HL2P0C7V6 817 aa28.5■■■□□ 2.15
TNFRSF4-201ENST00000379236 RXRAP19793 462 aa28.5■■■□□ 2.15
TNFRSF4-201ENST00000379236 SMARCA1P28370 1054 aa28.5■■■□□ 2.15
TNFRSF4-201ENST00000379236 EPHB4P54760 987 aa28.5■■■□□ 2.15
TNFRSF4-201ENST00000379236 CHMP4BP1P59074 171 aa28.5■■■□□ 2.15
TNFRSF4-201ENST00000379236 CUL5Q93034 780 aa28.5■■■□□ 2.15
TNFRSF4-201ENST00000379236 TRPV6Q9H1D0 765 aa28.5■■■□□ 2.15
TNFRSF4-201ENST00000379236 CCND2P30279 289 aa28.49■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms