RNA–Protein interactions for RNA: ENST00000378122.4

PCDHA9-201, Transcript of protocadherin alpha 9, humanhuman

BASIC

Gene PCDHA9, Length 6,900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-201ENST00000378122 SCG2P13521 617 aa13.09□□□□□ -0.31
PCDHA9-201ENST00000378122 MIER3Q7Z3K6 550 aa13.09□□□□□ -0.31
PCDHA9-201ENST00000378122 PPP6R2O75170 966 aa13.09□□□□□ -0.31
PCDHA9-201ENST00000378122 ATF2P15336 505 aa13.09□□□□□ -0.31
PCDHA9-201ENST00000378122 YY1P25490 414 aa13.09□□□□□ -0.31
PCDHA9-201ENST00000378122 PHLDB3Q6NSJ2 640 aa13.09□□□□□ -0.31
PCDHA9-201ENST00000378122 AKT3Q9Y243 479 aa13.09□□□□□ -0.31
PCDHA9-201ENST00000378122 USH1CQ9Y6N9 552 aa13.09□□□□□ -0.31
PCDHA9-201ENST00000378122 STAM2O75886 525 aa13.08□□□□□ -0.32
PCDHA9-201ENST00000378122 ATF7P17544 494 aaPredicted RBP13.08□□□□□ -0.32
PCDHA9-201ENST00000378122 MOCS3O95396 460 aa13.08□□□□□ -0.32
PCDHA9-201ENST00000378122 PDE6CP51160 858 aa13.08□□□□□ -0.32
PCDHA9-201ENST00000378122 AP1ARQ63HQ0 302 aa13.08□□□□□ -0.32
PCDHA9-201ENST00000378122 YEATS2Q9ULM3 1422 aa13.08□□□□□ -0.32
PCDHA9-201ENST00000378122 GAS7O60861 476 aa13.08□□□□□ -0.32
PCDHA9-201ENST00000378122 LRRC47Q8N1G4 583 aaKnown RBP13.08□□□□□ -0.32
PCDHA9-201ENST00000378122 PPP4R1Q8TF05 950 aa13.08□□□□□ -0.32
PCDHA9-201ENST00000378122 SEPT10Q9P0V9 454 aa13.08□□□□□ -0.32
PCDHA9-201ENST00000378122 DKC1O60832 514 aaKnown RBP eCLIP13.08□□□□□ -0.32
PCDHA9-201ENST00000378122 ZNF157P51786 506 aaPredicted RBP13.08□□□□□ -0.32
PCDHA9-201ENST00000378122 IFNB1P01574 187 aa13.08□□□□□ -0.32
PCDHA9-201ENST00000378122 PDE6AP16499 860 aa13.08□□□□□ -0.32
PCDHA9-201ENST00000378122 PARD6BQ9BYG5 372 aa13.08□□□□□ -0.32
PCDHA9-201ENST00000378122 EFCC1Q9HA90 598 aa13.08□□□□□ -0.32
PCDHA9-201ENST00000378122 SMIM24O75264 130 aa13.07□□□□□ -0.32
PCDHA9-201ENST00000378122 GYG1P46976 350 aa13.07□□□□□ -0.32
PCDHA9-201ENST00000378122 ADAM9Q13443 819 aa13.07□□□□□ -0.32
PCDHA9-201ENST00000378122 CIAPIN1Q6FI81 312 aa13.07□□□□□ -0.32
PCDHA9-201ENST00000378122 NEK8Q86SG6 692 aa13.07□□□□□ -0.32
PCDHA9-201ENST00000378122 NLRX1Q86UT6 975 aa13.07□□□□□ -0.32
PCDHA9-201ENST00000378122 CCDC197Q8NCU1 140 aa13.07□□□□□ -0.32
PCDHA9-201ENST00000378122 ADORA1P30542 326 aa13.07□□□□□ -0.32
PCDHA9-201ENST00000378122 IL17REQ8NFR9 667 aa13.07□□□□□ -0.32
PCDHA9-201ENST00000378122 MAP4K1Q92918 833 aa13.07□□□□□ -0.32
PCDHA9-201ENST00000378122 KDM6BO15054 1643 aa13.07□□□□□ -0.32
PCDHA9-201ENST00000378122 APBA1Q02410 837 aa13.07□□□□□ -0.32
PCDHA9-201ENST00000378122 TRMT2AQ8IZ69 625 aaKnown RBP13.07□□□□□ -0.32
PCDHA9-201ENST00000378122 ZNF513Q8N8E2 541 aaPredicted RBP13.07□□□□□ -0.32
PCDHA9-201ENST00000378122 COA7Q96BR5 231 aa13.07□□□□□ -0.32
PCDHA9-201ENST00000378122 PSTPIP2Q9H939 334 aa13.07□□□□□ -0.32
PCDHA9-201ENST00000378122 DDAH1O94760 285 aa13.07□□□□□ -0.32
PCDHA9-201ENST00000378122 LARGE1O95461 756 aa13.07□□□□□ -0.32
PCDHA9-201ENST00000378122 LONP1P36776 959 aaKnown RBP13.07□□□□□ -0.32
PCDHA9-201ENST00000378122 SCYL2Q6P3W7 929 aa13.07□□□□□ -0.32
PCDHA9-201ENST00000378122 MMS19Q96T76 1030 aa13.07□□□□□ -0.32
PCDHA9-201ENST00000378122 ATP8A2Q9NTI2 1148 aa13.07□□□□□ -0.32
PCDHA9-201ENST00000378122 A0A1W2PQ27 194 aa13.07□□□□□ -0.32
PCDHA9-201ENST00000378122 A0A1W2PQ64 194 aa13.07□□□□□ -0.32
PCDHA9-201ENST00000378122 A0A1W2PQD8 194 aa13.07□□□□□ -0.32
PCDHA9-201ENST00000378122 CXCR5P32302 372 aa13.07□□□□□ -0.32
PCDHA9-201ENST00000378122 NSUN7Q8NE18 718 aaKnown RBP13.07□□□□□ -0.32
PCDHA9-201ENST00000378122 EPB41L5Q9HCM4 733 aa13.07□□□□□ -0.32
PCDHA9-201ENST00000378122 RIC8AQ9NPQ8 531 aa13.07□□□□□ -0.32
PCDHA9-201ENST00000378122 PCDHA12Q9UN75 941 aa13.07□□□□□ -0.32
PCDHA9-201ENST00000378122 RSPH3Q86UC2 560 aa13.06□□□□□ -0.32
PCDHA9-201ENST00000378122 TUBGCP2Q9BSJ2 902 aa13.06□□□□□ -0.32
PCDHA9-201ENST00000378122 SAT1P21673 171 aa13.06□□□□□ -0.32
PCDHA9-201ENST00000378122 COG7P83436 770 aa13.06□□□□□ -0.32
PCDHA9-201ENST00000378122 FAM133BQ5BKY9 247 aaKnown RBP13.06□□□□□ -0.32
PCDHA9-201ENST00000378122 TTLL7Q6ZT98 887 aa13.06□□□□□ -0.32
PCDHA9-201ENST00000378122 ATP2A3Q93084 1043 aa13.06□□□□□ -0.32
PCDHA9-201ENST00000378122 ST7Q9NRC1 585 aa13.06□□□□□ -0.32
PCDHA9-201ENST00000378122 ARMCX3Q9UH62 379 aaPredicted RBP13.06□□□□□ -0.32
PCDHA9-201ENST00000378122 LRRD1A4D1F6 860 aa13.06□□□□□ -0.32
PCDHA9-201ENST00000378122 ADCY1Q08828 1119 aa13.06□□□□□ -0.32
PCDHA9-201ENST00000378122 PCDHA5Q9Y5H7 936 aa13.06□□□□□ -0.32
PCDHA9-201ENST00000378122 MLH3Q9UHC1 1453 aa13.06□□□□□ -0.32
PCDHA9-201ENST00000378122 GIPC1O14908 333 aa13.06□□□□□ -0.32
PCDHA9-201ENST00000378122 YARSP54577 528 aaKnown RBP13.06□□□□□ -0.32
PCDHA9-201ENST00000378122 STAP2Q9UGK3 403 aa13.06□□□□□ -0.32
PCDHA9-201ENST00000378122 LOC102724428A0A0B4J2F2 783 aa13.06□□□□□ -0.32
PCDHA9-201ENST00000378122 ZSCAN20P17040 1043 aaPredicted RBP13.06□□□□□ -0.32
PCDHA9-201ENST00000378122 SIK1P57059 783 aa13.06□□□□□ -0.32
PCDHA9-201ENST00000378122 IRX4P78413 519 aa13.06□□□□□ -0.32
PCDHA9-201ENST00000378122 SLFN12Q8IYM2 578 aa13.06□□□□□ -0.32
PCDHA9-201ENST00000378122 TYW1Q9NV66 732 aaKnown RBP13.06□□□□□ -0.32
PCDHA9-201ENST00000378122 CRKLP46109 303 aaKnown RBP13.06□□□□□ -0.32
PCDHA9-201ENST00000378122 IFNAR2P48551 515 aa13.06□□□□□ -0.32
PCDHA9-201ENST00000378122 EPHB4P54760 987 aa13.06□□□□□ -0.32
PCDHA9-201ENST00000378122 PRPF31Q8WWY3 499 aaKnown RBP13.06□□□□□ -0.32
PCDHA9-201ENST00000378122 JPH2Q9BR39 696 aaPredicted RBP13.06□□□□□ -0.32
PCDHA9-201ENST00000378122 FBXO38Q6PIJ6 1188 aa13.05□□□□□ -0.32
PCDHA9-201ENST00000378122 PNMA1Q8ND90 353 aa13.05□□□□□ -0.32
PCDHA9-201ENST00000378122 CFAP61Q8NHU2 1237 aa13.05□□□□□ -0.32
PCDHA9-201ENST00000378122 GPR101Q96P66 508 aaPredicted RBP13.05□□□□□ -0.32
PCDHA9-201ENST00000378122 LMCD1Q9NZU5 365 aa13.05□□□□□ -0.32
PCDHA9-201ENST00000378122 GYS2P54840 703 aa13.05□□□□□ -0.32
PCDHA9-201ENST00000378122 RPS8P62241 208 aaKnown RBP13.05□□□□□ -0.32
PCDHA9-201ENST00000378122 MYL7Q01449 175 aa13.05□□□□□ -0.32
PCDHA9-201ENST00000378122 SLC39A14Q15043 492 aa13.05□□□□□ -0.32
PCDHA9-201ENST00000378122 LRRC8CQ8TDW0 803 aa13.05□□□□□ -0.32
PCDHA9-201ENST00000378122 NSMCE1Q8WV22 266 aa13.05□□□□□ -0.32
PCDHA9-201ENST00000378122 CARD10Q9BWT7 1032 aa13.05□□□□□ -0.32
PCDHA9-201ENST00000378122 ZNF277Q9NRM2 450 aaPredicted RBP13.05□□□□□ -0.32
PCDHA9-201ENST00000378122 SRP68Q9UHB9 627 aaKnown RBP13.05□□□□□ -0.32
PCDHA9-201ENST00000378122 TFRCP02786 760 aaKnown RBP13.05□□□□□ -0.32
PCDHA9-201ENST00000378122 SCYL1Q96KG9 808 aa13.05□□□□□ -0.32
PCDHA9-201ENST00000378122 POC1B-GALNT4F8VUJ3 575 aa13.05□□□□□ -0.32
PCDHA9-201ENST00000378122 SERPINB6P35237 376 aa13.05□□□□□ -0.32
PCDHA9-201ENST00000378122 HNRNPH2P55795 449 aaKnown RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms