RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 FOXO4P98177 505 aa9.61□□□□□ -0.87
PCDH9-202ENST00000377865 NBPF9Q3BBW0 867 aa9.61□□□□□ -0.87
PCDH9-202ENST00000377865 TMTC3Q6ZXV5 915 aa9.61□□□□□ -0.87
PCDH9-202ENST00000377865 BANK1Q8NDB2 785 aa9.61□□□□□ -0.87
PCDH9-202ENST00000377865 CEP63Q96MT8 703 aa9.61□□□□□ -0.87
PCDH9-202ENST00000377865 DPH5Q9H2P9 285 aa9.61□□□□□ -0.87
PCDH9-202ENST00000377865 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.61□□□□□ -0.87
PCDH9-202ENST00000377865 ADAM9Q13443 819 aa9.61□□□□□ -0.87
PCDH9-202ENST00000377865 BRIP1Q9BX63 1249 aa9.61□□□□□ -0.87
PCDH9-202ENST00000377865 INTS9Q9NV88 658 aaKnown RBP9.61□□□□□ -0.87
PCDH9-202ENST00000377865 CEP72Q9P209 647 aa9.61□□□□□ -0.87
PCDH9-202ENST00000377865 HPCAL4Q9UM19 191 aa9.61□□□□□ -0.87
PCDH9-202ENST00000377865 PSMD14O00487 310 aa9.61□□□□□ -0.87
PCDH9-202ENST00000377865 CHRNDQ07001 517 aa9.61□□□□□ -0.87
PCDH9-202ENST00000377865 PPP4R3CPQ6ZMV5 832 aa9.61□□□□□ -0.87
PCDH9-202ENST00000377865 EYA3Q99504 573 aa9.61□□□□□ -0.87
PCDH9-202ENST00000377865 GJB4Q9NTQ9 266 aa9.61□□□□□ -0.87
PCDH9-202ENST00000377865 KIF1CO43896 1103 aaKnown RBP9.6□□□□□ -0.87
PCDH9-202ENST00000377865 FKBP3Q00688 224 aaKnown RBP9.6□□□□□ -0.87
PCDH9-202ENST00000377865 KCNB1Q14721 858 aa9.6□□□□□ -0.87
PCDH9-202ENST00000377865 DDB1Q16531 1140 aa9.6□□□□□ -0.87
PCDH9-202ENST00000377865 EXOC3L4Q17RC7 722 aa9.6□□□□□ -0.87
PCDH9-202ENST00000377865 LRCH2Q5VUJ6 765 aa9.6□□□□□ -0.87
PCDH9-202ENST00000377865 DDX25Q9UHL0 483 aaKnown RBP9.6□□□□□ -0.87
PCDH9-202ENST00000377865 PLAAQ9Y263 795 aa9.6□□□□□ -0.87
PCDH9-202ENST00000377865 KLRF2D3W0D1 207 aa9.6□□□□□ -0.87
PCDH9-202ENST00000377865 SART1O43290 800 aaKnown RBP9.6□□□□□ -0.87
PCDH9-202ENST00000377865 AFPP02771 609 aaKnown RBP9.6□□□□□ -0.87
PCDH9-202ENST00000377865 GCKP35557 465 aa9.6□□□□□ -0.87
PCDH9-202ENST00000377865 PROM2Q8N271 834 aa9.6□□□□□ -0.87
PCDH9-202ENST00000377865 OSBPL9Q96SU4 736 aa9.6□□□□□ -0.87
PCDH9-202ENST00000377865 TROVE2P10155 538 aaKnown RBP eCLIP9.6□□□□□ -0.87
PCDH9-202ENST00000377865 GJC1P36383 396 aa9.6□□□□□ -0.87
PCDH9-202ENST00000377865 WDR44Q5JSH3 913 aa9.6□□□□□ -0.87
PCDH9-202ENST00000377865 MCUR1Q96AQ8 359 aa9.6□□□□□ -0.87
PCDH9-202ENST00000377865 JPH2Q9BR39 696 aaPredicted RBP9.6□□□□□ -0.87
PCDH9-202ENST00000377865 DIP2AQ14689 1571 aa9.6□□□□□ -0.87
PCDH9-202ENST00000377865 AGLP35573 1532 aa9.6□□□□□ -0.87
PCDH9-202ENST00000377865 MYCT1Q8N699 235 aa9.6□□□□□ -0.87
PCDH9-202ENST00000377865 ADD3Q9UEY8 706 aaKnown RBP9.6□□□□□ -0.87
PCDH9-202ENST00000377865 TSPOAP1O95153 1857 aa9.6□□□□□ -0.87
PCDH9-202ENST00000377865 CEP170BQ9Y4F5 1589 aaPredicted RBP9.59□□□□□ -0.87
PCDH9-202ENST00000377865 ERVV-1B6SEH8 477 aa9.59□□□□□ -0.87
PCDH9-202ENST00000377865 ATP1A1P05023 1023 aaKnown RBP9.59□□□□□ -0.87
PCDH9-202ENST00000377865 GCFC2P16383 781 aaKnown RBP9.59□□□□□ -0.87
PCDH9-202ENST00000377865 PLCG1P19174 1290 aa9.59□□□□□ -0.87
PCDH9-202ENST00000377865 ATP2C1P98194 919 aaPredicted RBP9.59□□□□□ -0.87
PCDH9-202ENST00000377865 SLC7A5Q01650 507 aa9.59□□□□□ -0.87
PCDH9-202ENST00000377865 FMR1Q06787 632 aaKnown RBP eCLIP9.59□□□□□ -0.877e-10■■■■■ 35
PCDH9-202ENST00000377865 DPYDQ12882 1025 aa9.59□□□□□ -0.87
PCDH9-202ENST00000377865 NFU1Q9UMS0 254 aa9.59□□□□□ -0.87
PCDH9-202ENST00000377865 EVI5O60447 810 aa9.59□□□□□ -0.87
PCDH9-202ENST00000377865 SRGAP2O75044 1071 aa9.59□□□□□ -0.87
PCDH9-202ENST00000377865 FDPSP14324 419 aaKnown RBP9.59□□□□□ -0.87
PCDH9-202ENST00000377865 PRCPP42785 496 aa9.59□□□□□ -0.87
PCDH9-202ENST00000377865 CORO7P57737 925 aa9.59□□□□□ -0.87
PCDH9-202ENST00000377865 PFKFB3Q16875 520 aaPredicted RBP9.59□□□□□ -0.87
PCDH9-202ENST00000377865 ATG9AQ7Z3C6 839 aa9.59□□□□□ -0.87
PCDH9-202ENST00000377865 RBM17Q96I25 401 aaKnown RBP9.59□□□□□ -0.87
PCDH9-202ENST00000377865 FUT8Q9BYC5 575 aa9.59□□□□□ -0.87
PCDH9-202ENST00000377865 DAAM1Q9Y4D1 1078 aa9.59□□□□□ -0.87
PCDH9-202ENST00000377865 KRT5P13647 590 aa9.59□□□□□ -0.87
PCDH9-202ENST00000377865 ZNF131P52739 623 aa9.59□□□□□ -0.87
PCDH9-202ENST00000377865 MTF1Q14872 753 aa9.59□□□□□ -0.87
PCDH9-202ENST00000377865 PHLDB2Q86SQ0 1253 aa9.59□□□□□ -0.87
PCDH9-202ENST00000377865 CCDC13Q8IYE1 715 aa9.59□□□□□ -0.87
PCDH9-202ENST00000377865 ZNF512BQ96KM6 892 aaPredicted RBP9.59□□□□□ -0.87
PCDH9-202ENST00000377865 EDEM3Q9BZQ6 932 aa9.59□□□□□ -0.87
PCDH9-202ENST00000377865 STK38LQ9Y2H1 464 aa9.59□□□□□ -0.87
PCDH9-202ENST00000377865 DIP2BQ9P265 1576 aa9.59□□□□□ -0.87
PCDH9-202ENST00000377865 WDR17Q8IZU2 1322 aa9.59□□□□□ -0.87
PCDH9-202ENST00000377865 EIF3HO15372 352 aaKnown RBP eCLIP9.59□□□□□ -0.87
PCDH9-202ENST00000377865 PLCB3Q01970 1234 aa9.59□□□□□ -0.87
PCDH9-202ENST00000377865 ADCY2Q08462 1091 aa9.59□□□□□ -0.87
PCDH9-202ENST00000377865 PDCLQ13371 301 aa9.59□□□□□ -0.87
PCDH9-202ENST00000377865 PI16Q6UXB8 463 aa9.59□□□□□ -0.87
PCDH9-202ENST00000377865 UNC13DQ70J99 1090 aa9.59□□□□□ -0.87
PCDH9-202ENST00000377865 NLRP14Q86W24 1093 aa9.59□□□□□ -0.87
PCDH9-202ENST00000377865 ANKRD13CQ8N6S4 541 aa9.59□□□□□ -0.87
PCDH9-202ENST00000377865 ATP6V1G3Q96LB4 118 aa9.59□□□□□ -0.87
PCDH9-202ENST00000377865 PCDHA12Q9UN75 941 aa9.59□□□□□ -0.87
PCDH9-202ENST00000377865 GDAQ9Y2T3 454 aa9.59□□□□□ -0.87
PCDH9-202ENST00000377865 ARHGEF35A5YM69 484 aa9.59□□□□□ -0.87
PCDH9-202ENST00000377865 PRKAB2O43741 272 aa9.59□□□□□ -0.87
PCDH9-202ENST00000377865 CLTAP09496 248 aa9.59□□□□□ -0.87
PCDH9-202ENST00000377865 WDR93Q6P2C0 686 aa9.59□□□□□ -0.87
PCDH9-202ENST00000377865 LRIG3Q6UXM1 1119 aa9.59□□□□□ -0.87
PCDH9-202ENST00000377865 RSRC2Q7L4I2 434 aaKnown RBP9.59□□□□□ -0.87
PCDH9-202ENST00000377865 NLRP10Q86W26 655 aa9.59□□□□□ -0.87
PCDH9-202ENST00000377865 GPIHBP1Q8IV16 184 aa9.59□□□□□ -0.87
PCDH9-202ENST00000377865 SYNCQ9H7C4 482 aa9.59□□□□□ -0.87
PCDH9-202ENST00000377865 FOXN1O15353 648 aa9.58□□□□□ -0.88
PCDH9-202ENST00000377865 EXOC3O60645 756 aa9.58□□□□□ -0.88
PCDH9-202ENST00000377865 FTCDO95954 541 aa9.58□□□□□ -0.88
PCDH9-202ENST00000377865 CXCR5P32302 372 aa9.58□□□□□ -0.88
PCDH9-202ENST00000377865 SMTNP53814 917 aa9.58□□□□□ -0.88
PCDH9-202ENST00000377865 C6orf118Q5T5N4 469 aa9.58□□□□□ -0.88
PCDH9-202ENST00000377865 ANKRD42Q8N9B4 389 aa9.58□□□□□ -0.88
PCDH9-202ENST00000377865 TGFBRAP1Q8WUH2 860 aa9.58□□□□□ -0.88
PCDH9-202ENST00000377865 N4BP2L2Q92802 583 aaPredicted RBP9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms