RNA–Protein interactions for RNA: ENST00000377387.5

SF1-203, Transcript of splicing factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SF1, Length 2,947 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-203ENST00000377387 GRB10Q13322 594 aa20.17■□□□□ 0.82
SF1-203ENST00000377387 PAPD7Q5XG87 772 aaKnown RBP20.17■□□□□ 0.82
SF1-203ENST00000377387 FOXR1Q6PIV2 292 aa20.17■□□□□ 0.82
SF1-203ENST00000377387 RRAGAQ7L523 313 aa20.17■□□□□ 0.82
SF1-203ENST00000377387 EHD2Q9NZN4 543 aa20.17■□□□□ 0.82
SF1-203ENST00000377387 TBC1D7Q9P0N9 293 aa20.17■□□□□ 0.82
SF1-203ENST00000377387 CAPN6Q9Y6Q1 641 aa20.17■□□□□ 0.82
SF1-203ENST00000377387 EIF3CLB5ME19 914 aaKnown RBP20.17■□□□□ 0.82
SF1-203ENST00000377387 RAD21O60216 631 aa20.17■□□□□ 0.82
SF1-203ENST00000377387 RFC4P35249 363 aa20.17■□□□□ 0.82
SF1-203ENST00000377387 TNNI2P48788 182 aa20.17■□□□□ 0.82
SF1-203ENST00000377387 FAM196AQ6ZSG2 479 aa20.17■□□□□ 0.82
SF1-203ENST00000377387 EIF3CQ99613 913 aaKnown RBP20.17■□□□□ 0.82
SF1-203ENST00000377387 SPZ1Q9BXG8 430 aa20.17■□□□□ 0.82
SF1-203ENST00000377387 IFIH1Q9BYX4 1025 aaKnown RBP20.17■□□□□ 0.82
SF1-203ENST00000377387 FAM204AQ9H8W3 233 aa20.17■□□□□ 0.82
SF1-203ENST00000377387 LAMB1P07942 1786 aa20.17■□□□□ 0.82
SF1-203ENST00000377387 IRS2Q9Y4H2 1338 aa20.17■□□□□ 0.82
SF1-203ENST00000377387 EIF4A3P38919 411 aaKnown RBP20.16■□□□□ 0.82
SF1-203ENST00000377387 EZH2Q15910 746 aaKnown RBP20.16■□□□□ 0.82
SF1-203ENST00000377387 LEKR1Q6ZMV7 388 aa20.16■□□□□ 0.82
SF1-203ENST00000377387 KANSL2Q9H9L4 492 aa20.16■□□□□ 0.82
SF1-203ENST00000377387 BLOC1S4Q9NUP1 217 aa20.16■□□□□ 0.82
SF1-203ENST00000377387 ARHGAP20Q9P2F6 1191 aa20.16■□□□□ 0.82
SF1-203ENST00000377387 LCMT1Q9UIC8 334 aa20.16■□□□□ 0.82
SF1-203ENST00000377387 AKR1B10O60218 316 aa20.16■□□□□ 0.82
SF1-203ENST00000377387 GPSM2P81274 684 aa20.16■□□□□ 0.82
SF1-203ENST00000377387 ENOX2Q16206 610 aaKnown RBP20.16■□□□□ 0.82
SF1-203ENST00000377387 UBE2SQ16763 222 aa20.16■□□□□ 0.82
SF1-203ENST00000377387 WDR93Q6P2C0 686 aa20.16■□□□□ 0.82
SF1-203ENST00000377387 NDST4Q9H3R1 872 aa20.16■□□□□ 0.82
SF1-203ENST00000377387 CUEDC2Q9H467 287 aa20.16■□□□□ 0.82
SF1-203ENST00000377387 CNTNAP4Q9C0A0 1308 aa20.16■□□□□ 0.82
SF1-203ENST00000377387 GRAPQ13588 217 aa20.16■□□□□ 0.82
SF1-203ENST00000377387 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.16■□□□□ 0.82
SF1-203ENST00000377387 KCNK18Q7Z418 384 aa20.16■□□□□ 0.82
SF1-203ENST00000377387 GRAPLQ8TC17 118 aaPredicted RBP20.16■□□□□ 0.82
SF1-203ENST00000377387 COG1Q8WTW3 980 aa20.16■□□□□ 0.82
SF1-203ENST00000377387 TRIM34Q9BYJ4 488 aa20.16■□□□□ 0.82
SF1-203ENST00000377387 SRCAPQ6ZRS2 3230 aa20.15■□□□□ 0.82
SF1-203ENST00000377387 UTRNP46939 3433 aa20.15■□□□□ 0.82
SF1-203ENST00000377387 MARCH6O60337 910 aa20.15■□□□□ 0.82
SF1-203ENST00000377387 RNF40O75150 1001 aa20.15■□□□□ 0.82
SF1-203ENST00000377387 ACTN2P35609 894 aa20.15■□□□□ 0.82
SF1-203ENST00000377387 NAP1L1P55209 391 aaKnown RBP20.15■□□□□ 0.82
SF1-203ENST00000377387 PPP4CP60510 307 aa20.15■□□□□ 0.82
SF1-203ENST00000377387 MFSD14BQ5SR56 506 aa20.15■□□□□ 0.82
SF1-203ENST00000377387 EHBP1Q8NDI1 1231 aa20.15■□□□□ 0.82
SF1-203ENST00000377387 NEDD1Q8NHV4 660 aa20.15■□□□□ 0.82
SF1-203ENST00000377387 SNX29Q8TEQ0 813 aa20.15■□□□□ 0.82
SF1-203ENST00000377387 HDAC7Q8WUI4 952 aa20.15■□□□□ 0.82
SF1-203ENST00000377387 PNMA5Q96PV4 448 aa20.15■□□□□ 0.82
SF1-203ENST00000377387 LZTS2Q9BRK4 669 aa20.15■□□□□ 0.82
SF1-203ENST00000377387 ZNF287Q9HBT7 754 aa20.15■□□□□ 0.82
SF1-203ENST00000377387 CD209Q9NNX6 404 aa20.15■□□□□ 0.82
SF1-203ENST00000377387 NLRC4Q9NPP4 1024 aa20.15■□□□□ 0.82
SF1-203ENST00000377387 UBAP1LF5GYI3 381 aa20.15■□□□□ 0.82
SF1-203ENST00000377387 VAV2P52735 878 aa20.15■□□□□ 0.82
SF1-203ENST00000377387 SLC7A5Q01650 507 aa20.15■□□□□ 0.82
SF1-203ENST00000377387 VWA3BQ502W6 1294 aa20.15■□□□□ 0.82
SF1-203ENST00000377387 CCDC170Q8IYT3 715 aa20.15■□□□□ 0.82
SF1-203ENST00000377387 LARP4BQ92615 738 aaKnown RBP20.15■□□□□ 0.82
SF1-203ENST00000377387 LEMD3Q9Y2U8 911 aa20.15■□□□□ 0.82
SF1-203ENST00000377387 PCDHA13Q9Y5I0 950 aa20.15■□□□□ 0.82
SF1-203ENST00000377387 NCK2O43639 380 aa20.14■□□□□ 0.82
SF1-203ENST00000377387 SLURP2P0DP57 97 aa20.14■□□□□ 0.82
SF1-203ENST00000377387 C16orf86Q6ZW13 317 aa20.14■□□□□ 0.82
SF1-203ENST00000377387 RETREG2Q8NC44 543 aa20.14■□□□□ 0.82
SF1-203ENST00000377387 CASZ1Q86V15 1759 aa20.14■□□□□ 0.81
SF1-203ENST00000377387 LRRC53A6NM62 1247 aa20.14■□□□□ 0.81
SF1-203ENST00000377387 KIF11P52732 1056 aa20.14■□□□□ 0.81
SF1-203ENST00000377387 CACNB1Q02641 598 aaPredicted RBP20.14■□□□□ 0.81
SF1-203ENST00000377387 NFRKBQ6P4R8 1299 aa20.14■□□□□ 0.81
SF1-203ENST00000377387 CNBD1Q8NA66 436 aa20.14■□□□□ 0.81
SF1-203ENST00000377387 ACBD3Q9H3P7 528 aa20.14■□□□□ 0.81
SF1-203ENST00000377387 BUB1O43683 1085 aa20.13■□□□□ 0.81
SF1-203ENST00000377387 CKAP4Q07065 602 aaKnown RBP20.13■□□□□ 0.81
SF1-203ENST00000377387 GOLGA5Q8TBA6 731 aa20.13■□□□□ 0.81
SF1-203ENST00000377387 FAM71BQ8TC56 605 aa20.13■□□□□ 0.81
SF1-203ENST00000377387 ERGIC2Q96RQ1 377 aa20.13■□□□□ 0.81
SF1-203ENST00000377387 USP21Q9UK80 565 aa20.13■□□□□ 0.81
SF1-203ENST00000377387 ANKRD65E5RJM6 399 aa20.13■□□□□ 0.81
SF1-203ENST00000377387 USO1O60763 962 aaKnown RBP20.13■□□□□ 0.81
SF1-203ENST00000377387 SLC16A2P36021 539 aa20.13■□□□□ 0.81
SF1-203ENST00000377387 CENPPQ6IPU0 288 aa20.13■□□□□ 0.81
SF1-203ENST00000377387 TMC4Q7Z404 712 aa20.13■□□□□ 0.81
SF1-203ENST00000377387 DDX12PQ92771 950 aa20.13■□□□□ 0.81
SF1-203ENST00000377387 RPGRQ92834 1020 aaKnown RBP20.13■□□□□ 0.81
SF1-203ENST00000377387 CRACR2AQ9BSW2 395 aa20.13■□□□□ 0.81
SF1-203ENST00000377387 TRIM66O15016 1216 aa20.13■□□□□ 0.81
SF1-203ENST00000377387 APBA1Q02410 837 aa20.13■□□□□ 0.81
SF1-203ENST00000377387 TDRD12Q587J7 1177 aaKnown RBP20.13■□□□□ 0.81
SF1-203ENST00000377387 CACNA2D4Q7Z3S7 1137 aa20.13■□□□□ 0.81
SF1-203ENST00000377387 C10orf67Q8IYJ2 551 aa20.13■□□□□ 0.81
SF1-203ENST00000377387 MAGEF1Q9HAY2 307 aa20.13■□□□□ 0.81
SF1-203ENST00000377387 SYF2O95926 243 aaKnown RBP20.12■□□□□ 0.81
SF1-203ENST00000377387 ARID5AQ03989 594 aa20.12■□□□□ 0.81
SF1-203ENST00000377387 GFPT1Q06210 699 aaPredicted RBP20.12■□□□□ 0.81
SF1-203ENST00000377387 ZSCAN29Q8IWY8 852 aaPredicted RBP20.12■□□□□ 0.81
SF1-203ENST00000377387 LRRC1Q9BTT6 524 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms