RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 PURBQ96QR8 312 aaKnown RBP17.21■□□□□ 0.35
HDAC6-204ENST00000376643 PBX4Q9BYU1 374 aa17.21■□□□□ 0.35
HDAC6-204ENST00000376643 TRPV6Q9H1D0 765 aa17.21■□□□□ 0.35
HDAC6-204ENST00000376643 MAP3K20Q9NYL2 800 aaKnown RBP17.21■□□□□ 0.35
HDAC6-204ENST00000376643 NOD1Q9Y239 953 aa17.21■□□□□ 0.35
HDAC6-204ENST00000376643 GRIN2DO15399 1336 aa17.21■□□□□ 0.34
HDAC6-204ENST00000376643 PITPNM1O00562 1244 aa17.2■□□□□ 0.34
HDAC6-204ENST00000376643 IGHDP01880 384 aa17.2■□□□□ 0.34
HDAC6-204ENST00000376643 GOLGA8HP0CJ92 632 aa17.2■□□□□ 0.34
HDAC6-204ENST00000376643 BFSP2Q13515 415 aa17.2■□□□□ 0.34
HDAC6-204ENST00000376643 STXBP2Q15833 593 aa17.2■□□□□ 0.34
HDAC6-204ENST00000376643 FAM47CQ5HY64 1035 aa17.2■□□□□ 0.34
HDAC6-204ENST00000376643 ADGRF4Q8IZF3 695 aa17.2■□□□□ 0.34
HDAC6-204ENST00000376643 RETREG2Q8NC44 543 aa17.2■□□□□ 0.34
HDAC6-204ENST00000376643 UBA5Q9GZZ9 404 aa17.2■□□□□ 0.34
HDAC6-204ENST00000376643 SLC28A3Q9HAS3 691 aa17.2■□□□□ 0.34
HDAC6-204ENST00000376643 ZSWIM5Q9P217 1185 aa17.2■□□□□ 0.34
HDAC6-204ENST00000376643 SLC4A7Q9Y6M7 1214 aa17.2■□□□□ 0.34
HDAC6-204ENST00000376643 ERICH2A1L162 156 aa17.19■□□□□ 0.34
HDAC6-204ENST00000376643 GH1P01241 217 aa17.19■□□□□ 0.34
HDAC6-204ENST00000376643 CCL23P55773 120 aa17.19■□□□□ 0.34
HDAC6-204ENST00000376643 GRIN2CQ14957 1233 aa17.19■□□□□ 0.34
HDAC6-204ENST00000376643 SART3Q15020 963 aaKnown RBP17.19■□□□□ 0.34
HDAC6-204ENST00000376643 EXOC6Q8TAG9 804 aa17.19■□□□□ 0.34
HDAC6-204ENST00000376643 AMNQ9BXJ7 453 aa17.19■□□□□ 0.34
HDAC6-204ENST00000376643 DDX49Q9Y6V7 483 aaKnown RBP17.19■□□□□ 0.34
HDAC6-204ENST00000376643 U3KPZ7 1027 aaPredicted RBP17.19■□□□□ 0.34
HDAC6-204ENST00000376643 CUL9Q8IWT3 2517 aa17.19■□□□□ 0.34
HDAC6-204ENST00000376643 LCTP09848 1927 aa17.18■□□□□ 0.34
HDAC6-204ENST00000376643 LAMA2P24043 3122 aaKnown RBP17.18■□□□□ 0.34
HDAC6-204ENST00000376643 PARNO95453 639 aaKnown RBP17.18■□□□□ 0.34
HDAC6-204ENST00000376643 CASTP20810 708 aaKnown RBP17.18■□□□□ 0.34
HDAC6-204ENST00000376643 QRICH1Q2TAL8 776 aa17.18■□□□□ 0.34
HDAC6-204ENST00000376643 ARHGEF16Q5VV41 709 aa17.18■□□□□ 0.34
HDAC6-204ENST00000376643 OTOP2Q7RTS6 562 aa17.18■□□□□ 0.34
HDAC6-204ENST00000376643 RMDN3Q96TC7 470 aa17.18■□□□□ 0.34
HDAC6-204ENST00000376643 KATNAL1Q9BW62 490 aa17.18■□□□□ 0.34
HDAC6-204ENST00000376643 COL25A1Q9BXS0 654 aaPredicted RBP17.18■□□□□ 0.34
HDAC6-204ENST00000376643 ZBBXA8MT70 800 aa17.17■□□□□ 0.34
HDAC6-204ENST00000376643 EIF3JO75822 258 aaKnown RBP17.17■□□□□ 0.34
HDAC6-204ENST00000376643 NBPF20Q3BBV1 942 aa17.17■□□□□ 0.34
HDAC6-204ENST00000376643 KCNV1Q6PIU1 500 aa17.17■□□□□ 0.34
HDAC6-204ENST00000376643 SYTL5Q8TDW5 730 aaPredicted RBP17.17■□□□□ 0.34
HDAC6-204ENST00000376643 WNT8AQ9H1J5 351 aa17.17■□□□□ 0.34
HDAC6-204ENST00000376643 TRMT13Q9NUP7 481 aaKnown RBP17.17■□□□□ 0.34
HDAC6-204ENST00000376643 PCDHA11Q9Y5I1 949 aa17.17■□□□□ 0.34
HDAC6-204ENST00000376643 DGKDQ16760 1214 aa17.16■□□□□ 0.34
HDAC6-204ENST00000376643 RALYLQ86SE5 291 aaKnown RBP17.16■□□□□ 0.34
HDAC6-204ENST00000376643 CAGE1Q8TC20 777 aa17.16■□□□□ 0.34
HDAC6-204ENST00000376643 UMODL1Q5DID0 1318 aa17.16■□□□□ 0.34
HDAC6-204ENST00000376643 KLRF2D3W0D1 207 aa17.15■□□□□ 0.34
HDAC6-204ENST00000376643 ZBTB5O15062 677 aa17.15■□□□□ 0.34
HDAC6-204ENST00000376643 ATP2A2P16615 1042 aaKnown RBP17.15■□□□□ 0.34
HDAC6-204ENST00000376643 PTGS1P23219 599 aa17.15■□□□□ 0.34
HDAC6-204ENST00000376643 GHRHRQ02643 423 aa17.15■□□□□ 0.34
HDAC6-204ENST00000376643 LAMC2Q13753 1193 aa17.15■□□□□ 0.34
HDAC6-204ENST00000376643 TMEM63BQ5T3F8 832 aa17.15■□□□□ 0.34
HDAC6-204ENST00000376643 TTC22Q5TAA0 569 aa17.15■□□□□ 0.34
HDAC6-204ENST00000376643 CCDC62Q6P9F0 684 aa17.15■□□□□ 0.34
HDAC6-204ENST00000376643 SEPT14Q6ZU15 432 aa17.15■□□□□ 0.34
HDAC6-204ENST00000376643 SESTD1Q86VW0 696 aa17.15■□□□□ 0.34
HDAC6-204ENST00000376643 PHOSPHO2Q8TCD6 241 aa17.15■□□□□ 0.34
HDAC6-204ENST00000376643 EMID1Q96A84 441 aaPredicted RBP17.15■□□□□ 0.34
HDAC6-204ENST00000376643 SLC9A7Q96T83 725 aa17.15■□□□□ 0.34
HDAC6-204ENST00000376643 TSPYL2Q9H2G4 693 aaPredicted RBP17.15■□□□□ 0.34
HDAC6-204ENST00000376643 JMJD4Q9H9V9 463 aa17.15■□□□□ 0.34
HDAC6-204ENST00000376643 VAT1LQ9HCJ6 419 aa17.15■□□□□ 0.34
HDAC6-204ENST00000376643 CXXC1Q9P0U4 656 aaPredicted RBP17.15■□□□□ 0.34
HDAC6-204ENST00000376643 A0A0C4DFX4 3053 aa17.15■□□□□ 0.34
HDAC6-204ENST00000376643 KIF28PB7ZC32 967 aa17.14■□□□□ 0.33
HDAC6-204ENST00000376643 BAIAP3O94812 1187 aa17.14■□□□□ 0.33
HDAC6-204ENST00000376643 CFBP00751 764 aa17.14■□□□□ 0.33
HDAC6-204ENST00000376643 MMP3P08254 477 aa17.14■□□□□ 0.33
HDAC6-204ENST00000376643 CYP2C9P11712 490 aa17.14■□□□□ 0.33
HDAC6-204ENST00000376643 PBX2P40425 430 aa17.14■□□□□ 0.33
HDAC6-204ENST00000376643 AFAP1L1Q8TED9 768 aa17.14■□□□□ 0.33
HDAC6-204ENST00000376643 SCLYQ96I15 445 aa17.14■□□□□ 0.33
HDAC6-204ENST00000376643 TAAR1Q96RJ0 339 aa17.14■□□□□ 0.33
HDAC6-204ENST00000376643 CPVLQ9H3G5 476 aa17.14■□□□□ 0.33
HDAC6-204ENST00000376643 PXMP2Q9NR77 195 aa17.14■□□□□ 0.33
HDAC6-204ENST00000376643 MRVI1Q9Y6F6 885 aa17.14■□□□□ 0.33
HDAC6-204ENST00000376643 SCN10AQ9Y5Y9 1956 aa17.14■□□□□ 0.33
HDAC6-204ENST00000376643 GRXCR1A8MXD5 290 aa17.13■□□□□ 0.33
HDAC6-204ENST00000376643 NR3C2P08235 984 aa17.13■□□□□ 0.33
HDAC6-204ENST00000376643 HSD17B4P51659 736 aa17.13■□□□□ 0.33
HDAC6-204ENST00000376643 PTGISQ16647 500 aa17.13■□□□□ 0.33
HDAC6-204ENST00000376643 TJAP1Q5JTD0 557 aa17.13■□□□□ 0.33
HDAC6-204ENST00000376643 PPP2R2DQ66LE6 453 aa17.13■□□□□ 0.33
HDAC6-204ENST00000376643 NCOA7Q8NI08 942 aa17.13■□□□□ 0.33
HDAC6-204ENST00000376643 AFG1LQ8WV93 481 aa17.13■□□□□ 0.33
HDAC6-204ENST00000376643 COPS5Q92905 334 aa17.13■□□□□ 0.33
HDAC6-204ENST00000376643 FTOQ9C0B1 505 aaKnown RBP eCLIP17.13■□□□□ 0.33
HDAC6-204ENST00000376643 PRDM12Q9H4Q4 367 aa17.13■□□□□ 0.33
HDAC6-204ENST00000376643 PCDHA1Q9Y5I3 950 aa17.13■□□□□ 0.33
HDAC6-204ENST00000376643 IFIT3O14879 490 aaKnown RBP17.12■□□□□ 0.33
HDAC6-204ENST00000376643 ARIH2O95376 493 aa17.12■□□□□ 0.33
HDAC6-204ENST00000376643 IQCF3P0C7M6 154 aa17.12■□□□□ 0.33
HDAC6-204ENST00000376643 TGFB3P10600 412 aa17.12■□□□□ 0.33
HDAC6-204ENST00000376643 EIF2AK2P19525 551 aaKnown RBP17.12■□□□□ 0.33
HDAC6-204ENST00000376643 WTAPQ15007 396 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms