RNA–Protein interactions for RNA: ENST00000376610.6

HDAC6-202, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 736 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-202ENST00000376610 CDC37Q16543 378 aaPredicted RBP21.61■■□□□ 1.05
HDAC6-202ENST00000376610 KRT23Q9C075 422 aa21.61■■□□□ 1.05
HDAC6-202ENST00000376610 B4E1Z4 1266 aa21.6■■□□□ 1.05
HDAC6-202ENST00000376610 IGHDP01880 384 aa21.6■■□□□ 1.05
HDAC6-202ENST00000376610 PFKMP08237 780 aa21.6■■□□□ 1.05
HDAC6-202ENST00000376610 MCF2L2Q86YR7 1114 aa21.6■■□□□ 1.05
HDAC6-202ENST00000376610 UBAC1Q9BSL1 405 aa21.6■■□□□ 1.05
HDAC6-202ENST00000376610 WNT8AQ9H1J5 351 aa21.6■■□□□ 1.05
HDAC6-202ENST00000376610 CNNM2Q9H8M5 875 aa21.6■■□□□ 1.05
HDAC6-202ENST00000376610 SLC28A3Q9HAS3 691 aa21.6■■□□□ 1.05
HDAC6-202ENST00000376610 TRMT13Q9NUP7 481 aaKnown RBP21.6■■□□□ 1.05
HDAC6-202ENST00000376610 CXXC1Q9P0U4 656 aaPredicted RBP21.6■■□□□ 1.05
HDAC6-202ENST00000376610 SLC4A7Q9Y6M7 1214 aa21.6■■□□□ 1.05
HDAC6-202ENST00000376610 ZBBXA8MT70 800 aa21.59■■□□□ 1.05
HDAC6-202ENST00000376610 PARP1P09874 1014 aaKnown RBP21.59■■□□□ 1.05
HDAC6-202ENST00000376610 ADGRF4Q8IZF3 695 aa21.59■■□□□ 1.05
HDAC6-202ENST00000376610 ANKS1AQ92625 1134 aa21.59■■□□□ 1.05
HDAC6-202ENST00000376610 SYMPKQ92797 1274 aaKnown RBP21.59■■□□□ 1.05
HDAC6-202ENST00000376610 TTC28Q96AY4 2481 aa21.59■■□□□ 1.05
HDAC6-202ENST00000376610 CPVLQ9H3G5 476 aa21.59■■□□□ 1.05
HDAC6-202ENST00000376610 NOD1Q9Y239 953 aa21.59■■□□□ 1.05
HDAC6-202ENST00000376610 SCN10AQ9Y5Y9 1956 aa21.59■■□□□ 1.05
HDAC6-202ENST00000376610 VCANP13611 3396 aa21.59■■□□□ 1.05
HDAC6-202ENST00000376610 A6NJR5 290 aa21.58■■□□□ 1.05
HDAC6-202ENST00000376610 CYP2C9P11712 490 aa21.58■■□□□ 1.05
HDAC6-202ENST00000376610 NBPF20Q3BBV1 942 aa21.58■■□□□ 1.05
HDAC6-202ENST00000376610 NFRKBQ6P4R8 1299 aa21.58■■□□□ 1.05
HDAC6-202ENST00000376610 ENAHQ8N8S7 591 aaPredicted RBP21.58■■□□□ 1.05
HDAC6-202ENST00000376610 EXOC6Q8TAG9 804 aa21.58■■□□□ 1.05
HDAC6-202ENST00000376610 NSUN6Q8TEA1 469 aaKnown RBP21.58■■□□□ 1.05
HDAC6-202ENST00000376610 SCLYQ96I15 445 aa21.58■■□□□ 1.05
HDAC6-202ENST00000376610 PRDM12Q9H4Q4 367 aa21.58■■□□□ 1.05
HDAC6-202ENST00000376610 MRPL11Q9Y3B7 192 aaKnown RBP21.58■■□□□ 1.05
HDAC6-202ENST00000376610 PRUNE2Q8WUY3 3088 aa21.58■■□□□ 1.04
HDAC6-202ENST00000376610 ACTN1P12814 892 aa21.57■■□□□ 1.04
HDAC6-202ENST00000376610 PTPN11Q06124 597 aaPredicted RBP21.57■■□□□ 1.04
HDAC6-202ENST00000376610 FBXO11Q86XK2 927 aa21.57■■□□□ 1.04
HDAC6-202ENST00000376610 RETREG2Q8NC44 543 aa21.57■■□□□ 1.04
HDAC6-202ENST00000376610 COPS5Q92905 334 aa21.57■■□□□ 1.04
HDAC6-202ENST00000376610 NKX2-4Q9H2Z4 354 aa21.57■■□□□ 1.04
HDAC6-202ENST00000376610 ZSWIM5Q9P217 1185 aa21.57■■□□□ 1.04
HDAC6-202ENST00000376610 GBF1Q92538 1859 aa21.57■■□□□ 1.04
HDAC6-202ENST00000376610 RFC2P35250 354 aa21.56■■□□□ 1.04
HDAC6-202ENST00000376610 CHMP4BP1P59074 171 aa21.56■■□□□ 1.04
HDAC6-202ENST00000376610 STXBP2Q15833 593 aa21.56■■□□□ 1.04
HDAC6-202ENST00000376610 QRICH1Q2TAL8 776 aa21.56■■□□□ 1.04
HDAC6-202ENST00000376610 IFIT1BQ5T764 474 aaKnown RBP21.56■■□□□ 1.04
HDAC6-202ENST00000376610 SEPT14Q6ZU15 432 aa21.56■■□□□ 1.04
HDAC6-202ENST00000376610 IWS1Q96ST2 819 aa21.56■■□□□ 1.04
HDAC6-202ENST00000376610 RMDN3Q96TC7 470 aa21.56■■□□□ 1.04
HDAC6-202ENST00000376610 VAT1LQ9HCJ6 419 aa21.56■■□□□ 1.04
HDAC6-202ENST00000376610 GH1P01241 217 aa21.55■■□□□ 1.04
HDAC6-202ENST00000376610 DEFB128Q7Z7B8 93 aa21.55■■□□□ 1.04
HDAC6-202ENST00000376610 SYTL5Q8TDW5 730 aaPredicted RBP21.55■■□□□ 1.04
HDAC6-202ENST00000376610 PPM1EQ8WY54 764 aa21.55■■□□□ 1.04
HDAC6-202ENST00000376610 PITPNM1O00562 1244 aa21.54■■□□□ 1.04
HDAC6-202ENST00000376610 ATP2A2P16615 1042 aaKnown RBP21.54■■□□□ 1.04
HDAC6-202ENST00000376610 TRDNQ13061 729 aa21.54■■□□□ 1.04
HDAC6-202ENST00000376610 BFSP2Q13515 415 aa21.54■■□□□ 1.04
HDAC6-202ENST00000376610 ARHGEF16Q5VV41 709 aa21.54■■□□□ 1.04
HDAC6-202ENST00000376610 PPP2R2DQ66LE6 453 aa21.54■■□□□ 1.04
HDAC6-202ENST00000376610 CCDC155Q8N6L0 562 aa21.54■■□□□ 1.04
HDAC6-202ENST00000376610 TAAR1Q96RJ0 339 aa21.54■■□□□ 1.04
HDAC6-202ENST00000376610 PCDHA11Q9Y5I1 949 aa21.54■■□□□ 1.04
HDAC6-202ENST00000376610 KIAA1217Q5T5P2 1943 aa21.53■■□□□ 1.04
HDAC6-202ENST00000376610 ARIH2O95376 493 aa21.53■■□□□ 1.04
HDAC6-202ENST00000376610 IGFBP4P22692 258 aa21.53■■□□□ 1.04
HDAC6-202ENST00000376610 TJAP1Q5JTD0 557 aa21.53■■□□□ 1.04
HDAC6-202ENST00000376610 USP38Q8NB14 1042 aa21.53■■□□□ 1.04
HDAC6-202ENST00000376610 TBC1D5Q92609 795 aa21.53■■□□□ 1.04
HDAC6-202ENST00000376610 AMNQ9BXJ7 453 aa21.53■■□□□ 1.04
HDAC6-202ENST00000376610 JMJD4Q9H9V9 463 aa21.53■■□□□ 1.04
HDAC6-202ENST00000376610 YBX2Q9Y2T7 364 aaKnown RBP21.53■■□□□ 1.04
HDAC6-202ENST00000376610 SCN5AQ14524 2016 aa21.52■■□□□ 1.04
HDAC6-202ENST00000376610 CFBP00751 764 aa21.52■■□□□ 1.04
HDAC6-202ENST00000376610 CASTP20810 708 aaKnown RBP21.52■■□□□ 1.04
HDAC6-202ENST00000376610 RABGGTBP53611 331 aa21.52■■□□□ 1.04
HDAC6-202ENST00000376610 LY6KQ17RY6 165 aa21.52■■□□□ 1.04
HDAC6-202ENST00000376610 CCDC62Q6P9F0 684 aa21.52■■□□□ 1.04
HDAC6-202ENST00000376610 CHST3Q7LGC8 479 aa21.52■■□□□ 1.04
HDAC6-202ENST00000376610 AFG1LQ8WV93 481 aa21.52■■□□□ 1.04
HDAC6-202ENST00000376610 FTOQ9C0B1 505 aaKnown RBP eCLIP21.52■■□□□ 1.04
HDAC6-202ENST00000376610 MMP3P08254 477 aa21.51■■□□□ 1.03
HDAC6-202ENST00000376610 EIF2AK2P19525 551 aaKnown RBP21.51■■□□□ 1.03
HDAC6-202ENST00000376610 TRAF1Q13077 416 aa21.51■■□□□ 1.03
HDAC6-202ENST00000376610 PTGISQ16647 500 aa21.51■■□□□ 1.03
HDAC6-202ENST00000376610 RUFY2Q8WXA3 655 aa21.51■■□□□ 1.03
HDAC6-202ENST00000376610 COL20A1Q9P218 1284 aa21.51■■□□□ 1.03
HDAC6-202ENST00000376610 TANC1Q9C0D5 1861 aa21.51■■□□□ 1.03
HDAC6-202ENST00000376610 SPTBN5Q9NRC6 3674 aaKnown RBP21.51■■□□□ 1.03
HDAC6-202ENST00000376610 KLRF2D3W0D1 207 aa21.5■■□□□ 1.03
HDAC6-202ENST00000376610 EIF3JO75822 258 aaKnown RBP21.5■■□□□ 1.03
HDAC6-202ENST00000376610 IQCF3P0C7M6 154 aa21.5■■□□□ 1.03
HDAC6-202ENST00000376610 ARHGAP1Q07960 439 aa21.5■■□□□ 1.03
HDAC6-202ENST00000376610 DGKDQ16760 1214 aa21.5■■□□□ 1.03
HDAC6-202ENST00000376610 TMEM67Q5HYA8 995 aa21.5■■□□□ 1.03
HDAC6-202ENST00000376610 CAGE1Q8TC20 777 aa21.5■■□□□ 1.03
HDAC6-202ENST00000376610 PPP1R13LQ8WUF5 828 aa21.5■■□□□ 1.03
HDAC6-202ENST00000376610 SLC9A7Q96T83 725 aa21.5■■□□□ 1.03
HDAC6-202ENST00000376610 PXMP2Q9NR77 195 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms