RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 MOCS3O95396 460 aa15.72■□□□□ 0.11
CLCNKA-202ENST00000375692 CALML3P27482 149 aa15.72■□□□□ 0.11
CLCNKA-202ENST00000375692 IRAK1P51617 712 aa15.72■□□□□ 0.11
CLCNKA-202ENST00000375692 VAV2P52735 878 aa15.72■□□□□ 0.11
CLCNKA-202ENST00000375692 PDE4DQ08499 809 aa15.72■□□□□ 0.11
CLCNKA-202ENST00000375692 P2RX5Q93086 422 aa15.72■□□□□ 0.11
CLCNKA-202ENST00000375692 SNX12Q9UMY4 172 aa15.72■□□□□ 0.11
CLCNKA-202ENST00000375692 PCDHA6Q9UN73 950 aa15.72■□□□□ 0.11
CLCNKA-202ENST00000375692 PCDHA8Q9Y5H6 950 aa15.72■□□□□ 0.11
CLCNKA-202ENST00000375692 UTRNP46939 3433 aa15.72■□□□□ 0.11
CLCNKA-202ENST00000375692 ANO9A1A5B4 782 aa15.71■□□□□ 0.11
CLCNKA-202ENST00000375692 KLRG2A4D1S0 409 aaPredicted RBP15.71■□□□□ 0.11
CLCNKA-202ENST00000375692 EPHB6O15197 1021 aa15.71■□□□□ 0.11
CLCNKA-202ENST00000375692 ORC4O43929 436 aa15.71■□□□□ 0.11
CLCNKA-202ENST00000375692 PLCG1P19174 1290 aa15.71■□□□□ 0.11
CLCNKA-202ENST00000375692 CCT5P48643 541 aa15.71■□□□□ 0.11
CLCNKA-202ENST00000375692 NUP58Q9BVL2 599 aa15.71■□□□□ 0.11
CLCNKA-202ENST00000375692 FAM184BQ9ULE4 1060 aa15.71■□□□□ 0.11
CLCNKA-202ENST00000375692 ERCC3P19447 782 aa15.71■□□□□ 0.1
CLCNKA-202ENST00000375692 GPSM2P81274 684 aa15.71■□□□□ 0.1
CLCNKA-202ENST00000375692 MECOMQ03112 1051 aa15.71■□□□□ 0.1
CLCNKA-202ENST00000375692 SLC35G1Q2M3R5 365 aa15.71■□□□□ 0.1
CLCNKA-202ENST00000375692 NFRKBQ6P4R8 1299 aa15.71■□□□□ 0.1
CLCNKA-202ENST00000375692 ANKRD13CQ8N6S4 541 aa15.71■□□□□ 0.1
CLCNKA-202ENST00000375692 PPM1EQ8WY54 764 aa15.71■□□□□ 0.1
CLCNKA-202ENST00000375692 DHTKD1Q96HY7 919 aaPredicted RBP15.71■□□□□ 0.1
CLCNKA-202ENST00000375692 RBM17Q96I25 401 aaKnown RBP15.71■□□□□ 0.1
CLCNKA-202ENST00000375692 CACNA1SQ13698 1873 aa15.7■□□□□ 0.1
CLCNKA-202ENST00000375692 CCNE1P24864 410 aa15.7■□□□□ 0.1
CLCNKA-202ENST00000375692 SPA17Q15506 151 aa15.7■□□□□ 0.1
CLCNKA-202ENST00000375692 C2CD5Q86YS7 1000 aa15.7■□□□□ 0.1
CLCNKA-202ENST00000375692 NSUN4Q96CB9 384 aaKnown RBP15.7■□□□□ 0.1
CLCNKA-202ENST00000375692 FAM207AQ9NSI2 230 aaPredicted RBP15.7■□□□□ 0.1
CLCNKA-202ENST00000375692 ARHGAP20Q9P2F6 1191 aa15.7■□□□□ 0.1
CLCNKA-202ENST00000375692 M0R2N6 131 aa15.7■□□□□ 0.1
CLCNKA-202ENST00000375692 NCK2O43639 380 aa15.7■□□□□ 0.1
CLCNKA-202ENST00000375692 SHOX2O60902 331 aaPredicted RBP15.7■□□□□ 0.1
CLCNKA-202ENST00000375692 PCP11498 1178 aaKnown RBP15.7■□□□□ 0.1
CLCNKA-202ENST00000375692 HOXA10P31260 410 aaPredicted RBP15.7■□□□□ 0.1
CLCNKA-202ENST00000375692 CAVIN4Q5BKX8 364 aa15.7■□□□□ 0.1
CLCNKA-202ENST00000375692 HEATR3Q7Z4Q2 680 aa15.7■□□□□ 0.1
CLCNKA-202ENST00000375692 SPATA4Q8NEY3 305 aa15.7■□□□□ 0.1
CLCNKA-202ENST00000375692 IFIH1Q9BYX4 1025 aaKnown RBP15.7■□□□□ 0.1
CLCNKA-202ENST00000375692 ANKRD2Q9GZV1 360 aa15.7■□□□□ 0.1
CLCNKA-202ENST00000375692 PCDHA13Q9Y5I0 950 aa15.7■□□□□ 0.1
CLCNKA-202ENST00000375692 MYH10P35580 1976 aa15.69■□□□□ 0.1
CLCNKA-202ENST00000375692 KIF5BP33176 963 aa15.69■□□□□ 0.1
CLCNKA-202ENST00000375692 ASIC1P78348 528 aa15.69■□□□□ 0.1
CLCNKA-202ENST00000375692 TFAP4Q01664 338 aa15.69■□□□□ 0.1
CLCNKA-202ENST00000375692 RETREG2Q8NC44 543 aa15.69■□□□□ 0.1
CLCNKA-202ENST00000375692 NOC3LQ8WTT2 800 aaKnown RBP15.69■□□□□ 0.1
CLCNKA-202ENST00000375692 TRIM9Q9C026 710 aa15.69■□□□□ 0.1
CLCNKA-202ENST00000375692 CCSER1Q9C0I3 900 aa15.69■□□□□ 0.1
CLCNKA-202ENST00000375692 IL17RBQ9NRM6 502 aa15.69■□□□□ 0.1
CLCNKA-202ENST00000375692 JRKLQ9Y4A0 524 aa15.69■□□□□ 0.1
CLCNKA-202ENST00000375692 USP17L8P0C7I0 530 aa15.69■□□□□ 0.1
CLCNKA-202ENST00000375692 FBXO33Q7Z6M2 555 aa15.69■□□□□ 0.1
CLCNKA-202ENST00000375692 CABP7Q86V35 215 aa15.69■□□□□ 0.1
CLCNKA-202ENST00000375692 MMGT1Q8N4V1 131 aa15.69■□□□□ 0.1
CLCNKA-202ENST00000375692 TSEN2Q8NCE0 465 aaKnown RBP15.69■□□□□ 0.1
CLCNKA-202ENST00000375692 CPVLQ9H3G5 476 aa15.69■□□□□ 0.1
CLCNKA-202ENST00000375692 CHRNA5P30532 468 aa15.68■□□□□ 0.1
CLCNKA-202ENST00000375692 EIF4A3P38919 411 aaKnown RBP15.68■□□□□ 0.1
CLCNKA-202ENST00000375692 ATP2B2Q01814 1243 aa15.68■□□□□ 0.1
CLCNKA-202ENST00000375692 MICALL1Q8N3F8 863 aa15.68■□□□□ 0.1
CLCNKA-202ENST00000375692 PNMA1Q8ND90 353 aa15.68■□□□□ 0.1
CLCNKA-202ENST00000375692 ARL8AQ96BM9 186 aa15.68■□□□□ 0.1
CLCNKA-202ENST00000375692 SEMA6BQ9H3T3 888 aa15.68■□□□□ 0.1
CLCNKA-202ENST00000375692 SH2D4AQ9H788 454 aa15.68■□□□□ 0.1
CLCNKA-202ENST00000375692 SLC39A2Q9NP94 309 aa15.68■□□□□ 0.1
CLCNKA-202ENST00000375692 SALL4Q9UJQ4 1053 aa15.68■□□□□ 0.1
CLCNKA-202ENST00000375692 CYTH3O43739 400 aa15.68■□□□□ 0.1
CLCNKA-202ENST00000375692 TACC1O75410 805 aa15.68■□□□□ 0.1
CLCNKA-202ENST00000375692 PRDX5P30044 214 aa15.68■□□□□ 0.1
CLCNKA-202ENST00000375692 HIBADHP31937 336 aaKnown RBP15.68■□□□□ 0.1
CLCNKA-202ENST00000375692 ICE2Q659A1 982 aa15.68■□□□□ 0.1
CLCNKA-202ENST00000375692 IQCEQ6IPM2 695 aa15.68■□□□□ 0.1
CLCNKA-202ENST00000375692 CCDC70Q6NSX1 233 aa15.68■□□□□ 0.1
CLCNKA-202ENST00000375692 AMOTL1Q8IY63 956 aa15.68■□□□□ 0.1
CLCNKA-202ENST00000375692 TRIM58Q8NG06 486 aa15.68■□□□□ 0.1
CLCNKA-202ENST00000375692 DYNLL2Q96FJ2 89 aa15.68■□□□□ 0.1
CLCNKA-202ENST00000375692 OSBPL9Q96SU4 736 aa15.68■□□□□ 0.1
CLCNKA-202ENST00000375692 CAPS2Q9BXY5 557 aa15.68■□□□□ 0.1
CLCNKA-202ENST00000375692 CRNKL1Q9BZJ0 848 aaKnown RBP15.68■□□□□ 0.1
CLCNKA-202ENST00000375692 POLD4Q9HCU8 107 aa15.68■□□□□ 0.1
CLCNKA-202ENST00000375692 MCM9Q9NXL9 1143 aa15.68■□□□□ 0.1
CLCNKA-202ENST00000375692 FLT1P17948 1338 aa15.68■□□□□ 0.1
CLCNKA-202ENST00000375692 USP17L3A6NCW0 530 aa15.67■□□□□ 0.1
CLCNKA-202ENST00000375692 USP17L4A6NCW7 530 aa15.67■□□□□ 0.1
CLCNKA-202ENST00000375692 USO1O60763 962 aaKnown RBP15.67■□□□□ 0.1
CLCNKA-202ENST00000375692 KIF11P52732 1056 aa15.67■□□□□ 0.1
CLCNKA-202ENST00000375692 GNGT1P63211 74 aa15.67■□□□□ 0.1
CLCNKA-202ENST00000375692 USP17L1Q7RTZ2 530 aa15.67■□□□□ 0.1
CLCNKA-202ENST00000375692 EFCAB13Q8IY85 973 aa15.67■□□□□ 0.1
CLCNKA-202ENST00000375692 BCAS4Q8TDM0 211 aa15.67■□□□□ 0.1
CLCNKA-202ENST00000375692 ZNF622Q969S3 477 aaKnown RBP eCLIP15.67■□□□□ 0.1
CLCNKA-202ENST00000375692 ERGIC2Q96RQ1 377 aa15.67■□□□□ 0.1
CLCNKA-202ENST00000375692 MMRN2Q9H8L6 949 aa15.67■□□□□ 0.1
CLCNKA-202ENST00000375692 POLLQ9UGP5 575 aa15.67■□□□□ 0.1
CLCNKA-202ENST00000375692 BICDL2A1A5D9 508 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms