RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 MPHOSPH6Q99547 160 aaKnown RBP14.25□□□□□ -0.13
LSM2-208ENST00000375661 LSG1Q9H089 658 aaKnown RBP14.25□□□□□ -0.13
LSM2-208ENST00000375661 GPHNQ9NQX3 736 aaPredicted RBP14.25□□□□□ -0.13
LSM2-208ENST00000375661 IL17RBQ9NRM6 502 aa14.25□□□□□ -0.13
LSM2-208ENST00000375661 TRMT13Q9NUP7 481 aaKnown RBP14.25□□□□□ -0.13
LSM2-208ENST00000375661 COG5Q9UP83 839 aa14.25□□□□□ -0.13
LSM2-208ENST00000375661 TRIP12Q14669 1992 aaPredicted RBP14.25□□□□□ -0.13
LSM2-208ENST00000375661 CHD7Q9P2D1 2997 aa14.24□□□□□ -0.13
LSM2-208ENST00000375661 PTPRSQ13332 1948 aa14.24□□□□□ -0.13
LSM2-208ENST00000375661 PTGS1P23219 599 aa14.24□□□□□ -0.13
LSM2-208ENST00000375661 BAATQ14032 418 aaPredicted RBP14.24□□□□□ -0.13
LSM2-208ENST00000375661 TMEM63BQ5T3F8 832 aa14.24□□□□□ -0.13
LSM2-208ENST00000375661 CASC1Q6TDU7 716 aa14.24□□□□□ -0.13
LSM2-208ENST00000375661 MAP4K1Q92918 833 aa14.24□□□□□ -0.13
LSM2-208ENST00000375661 ANAPC4Q9UJX5 808 aa14.24□□□□□ -0.13
LSM2-208ENST00000375661 ARIH1Q9Y4X5 557 aaPredicted RBP14.24□□□□□ -0.13
LSM2-208ENST00000375661 MTCH2Q9Y6C9 303 aa14.24□□□□□ -0.13
LSM2-208ENST00000375661 DDX49Q9Y6V7 483 aaKnown RBP14.24□□□□□ -0.13
LSM2-208ENST00000375661 PRRC2BQ5JSZ5 2229 aaKnown RBP14.23□□□□□ -0.13
LSM2-208ENST00000375661 KIF28PB7ZC32 967 aa14.23□□□□□ -0.13
LSM2-208ENST00000375661 ORC4O43929 436 aa14.23□□□□□ -0.13
LSM2-208ENST00000375661 CA3P07451 260 aa14.23□□□□□ -0.13
LSM2-208ENST00000375661 MYL3P08590 195 aa14.23□□□□□ -0.13
LSM2-208ENST00000375661 CYP2C9P11712 490 aa14.23□□□□□ -0.13
LSM2-208ENST00000375661 SNAP25P60880 206 aa14.23□□□□□ -0.13
LSM2-208ENST00000375661 CTDSPL2Q05D32 466 aa14.23□□□□□ -0.13
LSM2-208ENST00000375661 CCDC96Q2M329 555 aa14.23□□□□□ -0.13
LSM2-208ENST00000375661 DEFB128Q7Z7B8 93 aa14.23□□□□□ -0.13
LSM2-208ENST00000375661 MICALL1Q8N3F8 863 aa14.23□□□□□ -0.13
LSM2-208ENST00000375661 RETREG2Q8NC44 543 aa14.23□□□□□ -0.13
LSM2-208ENST00000375661 OR6J1Q8NGC5 347 aa14.23□□□□□ -0.13
LSM2-208ENST00000375661 FAM122AQ96E09 287 aa14.23□□□□□ -0.13
LSM2-208ENST00000375661 INCENPQ9NQS7 918 aa14.23□□□□□ -0.13
LSM2-208ENST00000375661 KIAA1217Q5T5P2 1943 aa14.23□□□□□ -0.13
LSM2-208ENST00000375661 COL4A4P53420 1690 aaPredicted RBP14.23□□□□□ -0.13
LSM2-208ENST00000375661 B4DLN1 442 aa14.22□□□□□ -0.13
LSM2-208ENST00000375661 BAIAP3O94812 1187 aa14.22□□□□□ -0.13
LSM2-208ENST00000375661 FGRP09769 529 aa14.22□□□□□ -0.13
LSM2-208ENST00000375661 MRPL12P52815 198 aaKnown RBP14.22□□□□□ -0.13
LSM2-208ENST00000375661 HAND2P61296 217 aa14.22□□□□□ -0.13
LSM2-208ENST00000375661 BFSP2Q13515 415 aa14.22□□□□□ -0.13
LSM2-208ENST00000375661 PPP2R5BQ15173 497 aa14.22□□□□□ -0.13
LSM2-208ENST00000375661 SKIV2LQ15477 1246 aaKnown RBP14.22□□□□□ -0.13
LSM2-208ENST00000375661 NBPF20Q3BBV1 942 aa14.22□□□□□ -0.13
LSM2-208ENST00000375661 SYDE2Q5VT97 1194 aa14.22□□□□□ -0.13
LSM2-208ENST00000375661 DNERQ8NFT8 737 aa14.22□□□□□ -0.13
LSM2-208ENST00000375661 TET1Q8NFU7 2136 aa14.22□□□□□ -0.13
LSM2-208ENST00000375661 SCFD2Q8WU76 684 aa14.22□□□□□ -0.13
LSM2-208ENST00000375661 PURBQ96QR8 312 aaKnown RBP14.22□□□□□ -0.13
LSM2-208ENST00000375661 MAF1Q9H063 256 aa14.22□□□□□ -0.13
LSM2-208ENST00000375661 ANO2Q9NQ90 1003 aa14.22□□□□□ -0.13
LSM2-208ENST00000375661 PTPDC1A2A3K4 754 aa14.21□□□□□ -0.13
LSM2-208ENST00000375661 A6NJR5 290 aa14.21□□□□□ -0.13
LSM2-208ENST00000375661 NFIBO00712 420 aa14.21□□□□□ -0.13
LSM2-208ENST00000375661 RANBP6O60518 1105 aaKnown RBP14.21□□□□□ -0.13
LSM2-208ENST00000375661 NMT2O60551 498 aa14.21□□□□□ -0.13
LSM2-208ENST00000375661 IQCF3P0C7M6 154 aa14.21□□□□□ -0.13
LSM2-208ENST00000375661 TOP1P11387 765 aaKnown RBP14.21□□□□□ -0.13
LSM2-208ENST00000375661 EDNRBP24530 442 aa14.21□□□□□ -0.13
LSM2-208ENST00000375661 TFF2Q03403 129 aa14.21□□□□□ -0.13
LSM2-208ENST00000375661 FAM47CQ5HY64 1035 aa14.21□□□□□ -0.13
LSM2-208ENST00000375661 RNF207Q6ZRF8 634 aa14.21□□□□□ -0.13
LSM2-208ENST00000375661 TBC1D10CQ8IV04 446 aa14.21□□□□□ -0.13
LSM2-208ENST00000375661 HERC6Q8IVU3 1022 aa14.21□□□□□ -0.13
LSM2-208ENST00000375661 CHMP4CQ96CF2 233 aa14.21□□□□□ -0.13
LSM2-208ENST00000375661 TCP11L1Q9NUJ3 509 aa14.21□□□□□ -0.13
LSM2-208ENST00000375661 RAPGEFL1Q9UHV5 662 aa14.21□□□□□ -0.13
LSM2-208ENST00000375661 CTNNA3Q9UI47 895 aa14.21□□□□□ -0.13
LSM2-208ENST00000375661 RBM8AQ9Y5S9 174 aaKnown RBP14.21□□□□□ -0.13
LSM2-208ENST00000375661 U3KPZ7 1027 aaPredicted RBP14.21□□□□□ -0.13
LSM2-208ENST00000375661 TRANK1O15050 2925 aa14.21□□□□□ -0.14
LSM2-208ENST00000375661 WDR19Q8NEZ3 1342 aa14.2□□□□□ -0.14
LSM2-208ENST00000375661 ZNF213O14771 459 aa14.2□□□□□ -0.14
LSM2-208ENST00000375661 PARNO95453 639 aaKnown RBP14.2□□□□□ -0.14
LSM2-208ENST00000375661 KCNQ1P51787 676 aa14.2□□□□□ -0.14
LSM2-208ENST00000375661 TAP1Q03518 808 aa14.2□□□□□ -0.14
LSM2-208ENST00000375661 PDE4DQ08499 809 aa14.2□□□□□ -0.14
LSM2-208ENST00000375661 IMMTQ16891 758 aaKnown RBP14.2□□□□□ -0.14
LSM2-208ENST00000375661 TTBK2Q6IQ55 1244 aa14.2□□□□□ -0.14
LSM2-208ENST00000375661 RASGRP2Q7LDG7 609 aa14.2□□□□□ -0.14
LSM2-208ENST00000375661 CCDC155Q8N6L0 562 aa14.2□□□□□ -0.14
LSM2-208ENST00000375661 CAGE1Q8TC20 777 aa14.2□□□□□ -0.14
LSM2-208ENST00000375661 CLEC4DQ8WXI8 215 aa14.2□□□□□ -0.14
LSM2-208ENST00000375661 NECAB3Q96P71 396 aaPredicted RBP14.2□□□□□ -0.14
LSM2-208ENST00000375661 FTOQ9C0B1 505 aaKnown RBP eCLIP14.2□□□□□ -0.14
LSM2-208ENST00000375661 LMCD1Q9NZU5 365 aa14.2□□□□□ -0.14
LSM2-208ENST00000375661 MTMR7Q9Y216 660 aa14.2□□□□□ -0.14
LSM2-208ENST00000375661 SIP14410 1827 aa14.2□□□□□ -0.14
LSM2-208ENST00000375661 REV3LO60673 3130 aa14.19□□□□□ -0.14
LSM2-208ENST00000375661 MYH6P13533 1939 aa14.19□□□□□ -0.14
LSM2-208ENST00000375661 BDP1A6H8Y1 2624 aa14.19□□□□□ -0.14
LSM2-208ENST00000375661 RFXAPO00287 272 aa14.19□□□□□ -0.14
LSM2-208ENST00000375661 CYP21A2P08686 494 aa14.19□□□□□ -0.14
LSM2-208ENST00000375661 CALML3P27482 149 aa14.19□□□□□ -0.14
LSM2-208ENST00000375661 SLC16A2P36021 539 aa14.19□□□□□ -0.14
LSM2-208ENST00000375661 KCNJ6P48051 423 aa14.19□□□□□ -0.14
LSM2-208ENST00000375661 NECTIN1Q15223 517 aa14.19□□□□□ -0.14
LSM2-208ENST00000375661 SLC30A10Q6XR72 485 aa14.19□□□□□ -0.14
LSM2-208ENST00000375661 SESTD1Q86VW0 696 aa14.19□□□□□ -0.14
LSM2-208ENST00000375661 AFAP1L1Q8TED9 768 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms