RNA–Protein interactions for RNA: ENST00000375639.6

C6orf48-204, Transcript of chromosome 6 open reading frame 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C6orf48, Length 712 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C6orf48-204ENST00000375639 HOXC6P09630 235 aa20.28■□□□□ 0.84
C6orf48-204ENST00000375639 SAFBQ15424 915 aaKnown RBP eCLIP20.28■□□□□ 0.84
C6orf48-204ENST00000375639 CTU1Q7Z7A3 348 aaKnown RBP20.28■□□□□ 0.84
C6orf48-204ENST00000375639 TEX2Q8IWB9 1127 aa20.28■□□□□ 0.84
C6orf48-204ENST00000375639 DAGLBQ8NCG7 672 aa20.28■□□□□ 0.84
C6orf48-204ENST00000375639 MAML3Q96JK9 1138 aa20.28■□□□□ 0.84
C6orf48-204ENST00000375639 RMDN3Q96TC7 470 aa20.28■□□□□ 0.84
C6orf48-204ENST00000375639 DIS3Q9Y2L1 958 aaKnown RBP20.28■□□□□ 0.84
C6orf48-204ENST00000375639 ZNF236Q9UL36 1845 aa20.27■□□□□ 0.84
C6orf48-204ENST00000375639 FOSP01100 380 aaPredicted RBP20.27■□□□□ 0.84
C6orf48-204ENST00000375639 XRCC5P13010 732 aaKnown RBP20.27■□□□□ 0.84
C6orf48-204ENST00000375639 PDCP20941 246 aa20.27■□□□□ 0.84
C6orf48-204ENST00000375639 KRT2P35908 639 aa20.27■□□□□ 0.84
C6orf48-204ENST00000375639 CLK2P49760 499 aaKnown RBP20.27■□□□□ 0.84
C6orf48-204ENST00000375639 IRF5Q13568 498 aa20.27■□□□□ 0.84
C6orf48-204ENST00000375639 NPY5RQ15761 445 aa20.27■□□□□ 0.84
C6orf48-204ENST00000375639 ARHGEF16Q5VV41 709 aa20.27■□□□□ 0.84
C6orf48-204ENST00000375639 DNERQ8NFT8 737 aa20.27■□□□□ 0.84
C6orf48-204ENST00000375639 NSUN6Q8TEA1 469 aaKnown RBP20.27■□□□□ 0.84
C6orf48-204ENST00000375639 PGBD1Q96JS3 809 aa20.27■□□□□ 0.84
C6orf48-204ENST00000375639 PCDHA6Q9UN73 950 aa20.27■□□□□ 0.84
C6orf48-204ENST00000375639 PCDHA8Q9Y5H6 950 aa20.27■□□□□ 0.84
C6orf48-204ENST00000375639 EIF2AK2P19525 551 aaKnown RBP20.26■□□□□ 0.83
C6orf48-204ENST00000375639 ALDH5A1P51649 535 aaPredicted RBP20.26■□□□□ 0.83
C6orf48-204ENST00000375639 AP3B2Q13367 1082 aa20.26■□□□□ 0.83
C6orf48-204ENST00000375639 CCL14Q16627 93 aa20.26■□□□□ 0.83
C6orf48-204ENST00000375639 MCTP2Q6DN12 878 aa20.26■□□□□ 0.83
C6orf48-204ENST00000375639 DIS3L2Q8IYB7 885 aaKnown RBP20.26■□□□□ 0.83
C6orf48-204ENST00000375639 OXER1Q8TDS5 423 aa20.26■□□□□ 0.83
C6orf48-204ENST00000375639 FGD4Q96M96 766 aa20.26■□□□□ 0.83
C6orf48-204ENST00000375639 ANO3Q9BYT9 981 aa20.26■□□□□ 0.83
C6orf48-204ENST00000375639 PXMP2Q9NR77 195 aa20.26■□□□□ 0.83
C6orf48-204ENST00000375639 PTPN22Q9Y2R2 807 aa20.26■□□□□ 0.83
C6orf48-204ENST00000375639 PTCH2Q9Y6C5 1203 aa20.26■□□□□ 0.83
C6orf48-204ENST00000375639 PLXNA1Q9UIW2 1896 aa20.25■□□□□ 0.83
C6orf48-204ENST00000375639 BTBD18B2RXH4 712 aa20.25■□□□□ 0.83
C6orf48-204ENST00000375639 ADCY3O60266 1144 aa20.25■□□□□ 0.83
C6orf48-204ENST00000375639 UBXN2AP68543 259 aa20.25■□□□□ 0.83
C6orf48-204ENST00000375639 ZNF467Q7Z7K2 595 aaPredicted RBP20.25■□□□□ 0.83
C6orf48-204ENST00000375639 MPHOSPH6Q99547 160 aaKnown RBP20.25■□□□□ 0.83
C6orf48-204ENST00000375639 EHMT1Q9H9B1 1298 aa20.25■□□□□ 0.83
C6orf48-204ENST00000375639 ASTN1O14525 1302 aa20.25■□□□□ 0.83
C6orf48-204ENST00000375639 LCTP09848 1927 aa20.24■□□□□ 0.83
C6orf48-204ENST00000375639 VPS37CA5D8V6 355 aaPredicted RBP20.24■□□□□ 0.83
C6orf48-204ENST00000375639 ASB14A6NK59 587 aa20.24■□□□□ 0.83
C6orf48-204ENST00000375639 B4DLN1 442 aa20.24■□□□□ 0.83
C6orf48-204ENST00000375639 ELNP15502 786 aa20.24■□□□□ 0.83
C6orf48-204ENST00000375639 SYT1P21579 422 aa20.24■□□□□ 0.83
C6orf48-204ENST00000375639 NR5A1Q13285 461 aa20.24■□□□□ 0.83
C6orf48-204ENST00000375639 GNL2Q13823 731 aaKnown RBP20.24■□□□□ 0.83
C6orf48-204ENST00000375639 MCTP1Q6DN14 999 aa20.24■□□□□ 0.83
C6orf48-204ENST00000375639 TRMT44Q8IYL2 757 aaKnown RBP20.24■□□□□ 0.83
C6orf48-204ENST00000375639 TINF2Q9BSI4 451 aa20.24■□□□□ 0.83
C6orf48-204ENST00000375639 FLRT1Q9NZU1 646 aa20.24■□□□□ 0.83
C6orf48-204ENST00000375639 DDX49Q9Y6V7 483 aaKnown RBP20.24■□□□□ 0.83
C6orf48-204ENST00000375639 CCDC194A0A1B0GVG4 234 aa20.23■□□□□ 0.83
C6orf48-204ENST00000375639 M0R2N6 131 aa20.23■□□□□ 0.83
C6orf48-204ENST00000375639 MYCLP12524 364 aaPredicted RBP20.23■□□□□ 0.83
C6orf48-204ENST00000375639 PDE4DQ08499 809 aa20.23■□□□□ 0.83
C6orf48-204ENST00000375639 OLFML2BQ68BL8 750 aa20.23■□□□□ 0.83
C6orf48-204ENST00000375639 KRT25Q7Z3Z0 450 aa20.23■□□□□ 0.83
C6orf48-204ENST00000375639 TRIB2Q92519 343 aa20.23■□□□□ 0.83
C6orf48-204ENST00000375639 PDCD2LQ9BRP1 358 aa20.23■□□□□ 0.83
C6orf48-204ENST00000375639 NR3C2P08235 984 aa20.22■□□□□ 0.83
C6orf48-204ENST00000375639 CYP2C19P33261 490 aa20.22■□□□□ 0.83
C6orf48-204ENST00000375639 PGM5Q15124 567 aa20.22■□□□□ 0.83
C6orf48-204ENST00000375639 MFSD14CQ5VZR4 134 aa20.22■□□□□ 0.83
C6orf48-204ENST00000375639 MAMDC4Q6UXC1 1216 aa20.22■□□□□ 0.83
C6orf48-204ENST00000375639 PIK3AP1Q6ZUJ8 805 aa20.22■□□□□ 0.83
C6orf48-204ENST00000375639 ARMCX2Q7L311 632 aa20.22■□□□□ 0.83
C6orf48-204ENST00000375639 MSL3Q8N5Y2 521 aaKnown RBP20.22■□□□□ 0.83
C6orf48-204ENST00000375639 SLAIN1Q8ND83 568 aa20.22■□□□□ 0.83
C6orf48-204ENST00000375639 IWS1Q96ST2 819 aa20.22■□□□□ 0.83
C6orf48-204ENST00000375639 RPTORQ8N122 1335 aa20.22■□□□□ 0.83
C6orf48-204ENST00000375639 LOC102724159A0A0B4J2E5 919 aa20.21■□□□□ 0.83
C6orf48-204ENST00000375639 STX6O43752 255 aa20.21■□□□□ 0.83
C6orf48-204ENST00000375639 GRK4P32298 578 aa20.21■□□□□ 0.83
C6orf48-204ENST00000375639 NONOQ15233 471 aaKnown RBP eCLIP20.21■□□□□ 0.83
C6orf48-204ENST00000375639 PWP2Q15269 919 aaKnown RBP20.21■□□□□ 0.83
C6orf48-204ENST00000375639 PKN2Q16513 984 aaKnown RBP20.21■□□□□ 0.83
C6orf48-204ENST00000375639 IL31RAQ8NI17 732 aa20.21■□□□□ 0.83
C6orf48-204ENST00000375639 PXYLP1Q8TE99 480 aa20.21■□□□□ 0.83
C6orf48-204ENST00000375639 ZFP91Q96JP5 570 aaPredicted RBP20.21■□□□□ 0.83
C6orf48-204ENST00000375639 FOXP1Q9H334 677 aaPredicted RBP20.21■□□□□ 0.83
C6orf48-204ENST00000375639 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.21■□□□□ 0.83
C6orf48-204ENST00000375639 SNAI1O95863 264 aaPredicted RBP20.2■□□□□ 0.82
C6orf48-204ENST00000375639 EDNRBP24530 442 aa20.2■□□□□ 0.82
C6orf48-204ENST00000375639 CCND2P30279 289 aa20.2■□□□□ 0.82
C6orf48-204ENST00000375639 SREBF1P36956 1147 aa20.2■□□□□ 0.82
C6orf48-204ENST00000375639 STXBP2Q15833 593 aa20.2■□□□□ 0.82
C6orf48-204ENST00000375639 HABP4Q5JVS0 413 aaKnown RBP20.2■□□□□ 0.82
C6orf48-204ENST00000375639 FBXO46Q6PJ61 603 aaPredicted RBP20.2■□□□□ 0.82
C6orf48-204ENST00000375639 EEPD1Q7L9B9 569 aa20.2■□□□□ 0.82
C6orf48-204ENST00000375639 TBCKQ8TEA7 893 aa20.2■□□□□ 0.82
C6orf48-204ENST00000375639 TNFRSF25Q93038 417 aa20.2■□□□□ 0.82
C6orf48-204ENST00000375639 FRMPD4Q14CM0 1322 aa20.2■□□□□ 0.82
C6orf48-204ENST00000375639 SYNGAP1Q96PV0 1343 aa20.2■□□□□ 0.82
C6orf48-204ENST00000375639 FAM205CA6NFA0 338 aa20.19■□□□□ 0.82
C6orf48-204ENST00000375639 KIF28PB7ZC32 967 aa20.19■□□□□ 0.82
C6orf48-204ENST00000375639 HMGCRP04035 888 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms