RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 IL1R1P14778 569 aa12.34□□□□□ -0.43
CCDC40-203ENST00000374877 UBA7P41226 1012 aa12.34□□□□□ -0.43
CCDC40-203ENST00000374877 TXNRD3Q86VQ6 643 aa12.34□□□□□ -0.43
CCDC40-203ENST00000374877 RUFY1Q96T51 708 aa12.34□□□□□ -0.43
CCDC40-203ENST00000374877 LRRC1Q9BTT6 524 aa12.34□□□□□ -0.43
CCDC40-203ENST00000374877 POLLQ9UGP5 575 aa12.34□□□□□ -0.43
CCDC40-203ENST00000374877 DMGDHQ9UI17 866 aaKnown RBP12.34□□□□□ -0.43
CCDC40-203ENST00000374877 DLEC1Q9Y238 1755 aa12.34□□□□□ -0.43
CCDC40-203ENST00000374877 SHTN1A0MZ66 631 aa12.34□□□□□ -0.43
CCDC40-203ENST00000374877 ERLIN2O94905 339 aa12.34□□□□□ -0.43
CCDC40-203ENST00000374877 PPFIA1Q13136 1202 aa12.34□□□□□ -0.43
CCDC40-203ENST00000374877 FAM47AQ5JRC9 791 aa12.34□□□□□ -0.43
CCDC40-203ENST00000374877 WDR66Q8TBY9 1149 aa12.34□□□□□ -0.43
CCDC40-203ENST00000374877 FAM169AQ9Y6X4 670 aa12.34□□□□□ -0.43
CCDC40-203ENST00000374877 KIF13BQ9NQT8 1826 aa12.34□□□□□ -0.43
CCDC40-203ENST00000374877 SHOX2O60902 331 aaPredicted RBP12.33□□□□□ -0.43
CCDC40-203ENST00000374877 PLEKP08567 350 aaPredicted RBP12.33□□□□□ -0.43
CCDC40-203ENST00000374877 CXCR5P32302 372 aa12.33□□□□□ -0.43
CCDC40-203ENST00000374877 ZBED6P86452 979 aa12.33□□□□□ -0.43
CCDC40-203ENST00000374877 SPTY2D1Q68D10 685 aaPredicted RBP12.33□□□□□ -0.43
CCDC40-203ENST00000374877 DTHD1Q6ZMT9 781 aa12.33□□□□□ -0.43
CCDC40-203ENST00000374877 AMOTL1Q8IY63 956 aa12.33□□□□□ -0.43
CCDC40-203ENST00000374877 CCDC170Q8IYT3 715 aa12.33□□□□□ -0.43
CCDC40-203ENST00000374877 AENQ8WTP8 325 aaKnown RBP12.33□□□□□ -0.43
CCDC40-203ENST00000374877 SMARCAL1Q9NZC9 954 aa12.33□□□□□ -0.43
CCDC40-203ENST00000374877 ANAPC4Q9UJX5 808 aa12.33□□□□□ -0.43
CCDC40-203ENST00000374877 TACC1O75410 805 aa12.33□□□□□ -0.44
CCDC40-203ENST00000374877 DDAH1O94760 285 aa12.33□□□□□ -0.44
CCDC40-203ENST00000374877 POLD1P28340 1107 aa12.33□□□□□ -0.44
CCDC40-203ENST00000374877 VAV2P52735 878 aa12.33□□□□□ -0.44
CCDC40-203ENST00000374877 NAALADL2Q58DX5 795 aa12.33□□□□□ -0.44
CCDC40-203ENST00000374877 CCDC181Q5TID7 509 aa12.33□□□□□ -0.44
CCDC40-203ENST00000374877 GPKOWQ92917 476 aaPredicted RBP eCLIP12.33□□□□□ -0.44
CCDC40-203ENST00000374877 CNOT6LQ96LI5 555 aaKnown RBP12.33□□□□□ -0.44
CCDC40-203ENST00000374877 NOC4LQ9BVI4 516 aaKnown RBP12.33□□□□□ -0.44
CCDC40-203ENST00000374877 NUP58Q9BVL2 599 aa12.33□□□□□ -0.44
CCDC40-203ENST00000374877 MLXIPQ9HAP2 919 aa12.33□□□□□ -0.44
CCDC40-203ENST00000374877 SNX12Q9UMY4 172 aa12.33□□□□□ -0.44
CCDC40-203ENST00000374877 CAPN6Q9Y6Q1 641 aa12.33□□□□□ -0.44
CCDC40-203ENST00000374877 USO1O60763 962 aaKnown RBP12.33□□□□□ -0.44
CCDC40-203ENST00000374877 CCDC178Q5BJE1 867 aa12.33□□□□□ -0.44
CCDC40-203ENST00000374877 ARL6IP4Q66PJ3 421 aaKnown RBP12.33□□□□□ -0.44
CCDC40-203ENST00000374877 TYW1BQ6NUM6 668 aa12.33□□□□□ -0.44
CCDC40-203ENST00000374877 TTI2Q6NXR4 508 aa12.33□□□□□ -0.44
CCDC40-203ENST00000374877 DPP8Q6V1X1 898 aaPredicted RBP12.33□□□□□ -0.44
CCDC40-203ENST00000374877 SLC51AQ86UW1 340 aa12.33□□□□□ -0.44
CCDC40-203ENST00000374877 EYA3Q99504 573 aa12.33□□□□□ -0.44
CCDC40-203ENST00000374877 CD209Q9NNX6 404 aa12.33□□□□□ -0.44
CCDC40-203ENST00000374877 SAMM50Q9Y512 469 aa12.33□□□□□ -0.44
CCDC40-203ENST00000374877 USP17L12C9JPN9 530 aa12.32□□□□□ -0.44
CCDC40-203ENST00000374877 USP17L21D6R901 530 aa12.32□□□□□ -0.44
CCDC40-203ENST00000374877 MOCS3O95396 460 aa12.32□□□□□ -0.44
CCDC40-203ENST00000374877 EVX2Q03828 476 aa12.32□□□□□ -0.44
CCDC40-203ENST00000374877 ZNF662Q6ZS27 426 aa12.32□□□□□ -0.44
CCDC40-203ENST00000374877 CREG2Q8IUH2 290 aa12.32□□□□□ -0.44
CCDC40-203ENST00000374877 TRIM58Q8NG06 486 aa12.32□□□□□ -0.44
CCDC40-203ENST00000374877 C7orf43Q8WVR3 580 aa12.32□□□□□ -0.44
CCDC40-203ENST00000374877 RTFDC1Q9BY42 306 aaPredicted RBP12.32□□□□□ -0.44
CCDC40-203ENST00000374877 IFIH1Q9BYX4 1025 aaKnown RBP12.32□□□□□ -0.44
CCDC40-203ENST00000374877 TTYH3Q9C0H2 523 aa12.32□□□□□ -0.44
CCDC40-203ENST00000374877 COA1Q9GZY4 146 aa12.32□□□□□ -0.44
CCDC40-203ENST00000374877 MAST2Q6P0Q8 1798 aa12.32□□□□□ -0.44
CCDC40-203ENST00000374877 FAM205AQ6ZU69 1335 aa12.32□□□□□ -0.44
CCDC40-203ENST00000374877 RASSF10A6NK89 507 aa12.32□□□□□ -0.44
CCDC40-203ENST00000374877 C6orf229H3BNL8 230 aa12.32□□□□□ -0.44
CCDC40-203ENST00000374877 GUCY2CP25092 1073 aa12.32□□□□□ -0.44
CCDC40-203ENST00000374877 CHRNA5P30532 468 aa12.32□□□□□ -0.44
CCDC40-203ENST00000374877 PFKFB3Q16875 520 aaPredicted RBP12.32□□□□□ -0.44
CCDC40-203ENST00000374877 SLC4A8Q2Y0W8 1093 aa12.32□□□□□ -0.44
CCDC40-203ENST00000374877 BLIDQ8IZY5 108 aa12.32□□□□□ -0.44
CCDC40-203ENST00000374877 SPATA4Q8NEY3 305 aa12.32□□□□□ -0.44
CCDC40-203ENST00000374877 TSGA10Q9BZW7 698 aa12.32□□□□□ -0.44
CCDC40-203ENST00000374877 EHD2Q9NZN4 543 aa12.32□□□□□ -0.44
CCDC40-203ENST00000374877 SNED1Q8TER0 1413 aa12.32□□□□□ -0.44
CCDC40-203ENST00000374877 MYH13Q9UKX3 1938 aa12.32□□□□□ -0.44
CCDC40-203ENST00000374877 CCDC194A0A1B0GVG4 234 aa12.32□□□□□ -0.44
CCDC40-203ENST00000374877 ZNF263O14978 683 aa12.32□□□□□ -0.44
CCDC40-203ENST00000374877 NFRKBQ6P4R8 1299 aa12.32□□□□□ -0.44
CCDC40-203ENST00000374877 MMS22LQ6ZRQ5 1243 aa12.32□□□□□ -0.44
CCDC40-203ENST00000374877 DUSP9Q99956 384 aaKnown RBP12.32□□□□□ -0.44
CCDC40-203ENST00000374877 GOLGA8KD6RF30 607 aa12.31□□□□□ -0.44
CCDC40-203ENST00000374877 EIF3HO15372 352 aaKnown RBP eCLIP12.31□□□□□ -0.44
CCDC40-203ENST00000374877 KLRC4O43908 158 aa12.31□□□□□ -0.44
CCDC40-203ENST00000374877 OPA1O60313 960 aa12.31□□□□□ -0.44
CCDC40-203ENST00000374877 CPP00450 1065 aa12.31□□□□□ -0.44
CCDC40-203ENST00000374877 TGFB2P61812 414 aa12.31□□□□□ -0.44
CCDC40-203ENST00000374877 PDE4DQ08499 809 aa12.31□□□□□ -0.44
CCDC40-203ENST00000374877 KCNB1Q14721 858 aa12.31□□□□□ -0.44
CCDC40-203ENST00000374877 RETREG2Q8NC44 543 aa12.31□□□□□ -0.44
CCDC40-203ENST00000374877 GIMAP8Q8ND71 665 aaPredicted RBP12.31□□□□□ -0.44
CCDC40-203ENST00000374877 TMEM60Q9H2L4 133 aa12.31□□□□□ -0.44
CCDC40-203ENST00000374877 MTMR7Q9Y216 660 aa12.31□□□□□ -0.44
CCDC40-203ENST00000374877 RHOBTB3O94955 611 aa12.31□□□□□ -0.44
CCDC40-203ENST00000374877 CALML3P27482 149 aa12.31□□□□□ -0.44
CCDC40-203ENST00000374877 MMGT1Q8N4V1 131 aa12.31□□□□□ -0.44
CCDC40-203ENST00000374877 C4orf32Q8N8J7 132 aa12.31□□□□□ -0.44
CCDC40-203ENST00000374877 NOC3LQ8WTT2 800 aaKnown RBP12.31□□□□□ -0.44
CCDC40-203ENST00000374877 PURBQ96QR8 312 aaKnown RBP12.31□□□□□ -0.44
CCDC40-203ENST00000374877 RIOK1Q9BRS2 568 aaKnown RBP12.31□□□□□ -0.44
CCDC40-203ENST00000374877 POLD4Q9HCU8 107 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms