RNA–Protein interactions for RNA: ENST00000374610.6

PFDN6-203, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PFDN6, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-203ENST00000374610 TRIM32Q13049 653 aa17.47■□□□□ 0.39
PFDN6-203ENST00000374610 UBE2SQ16763 222 aa17.47■□□□□ 0.39
PFDN6-203ENST00000374610 RNF208Q9H0X6 261 aa17.47■□□□□ 0.39
PFDN6-203ENST00000374610 BRMS1Q9HCU9 246 aa17.47■□□□□ 0.39
PFDN6-203ENST00000374610 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.47■□□□□ 0.39
PFDN6-203ENST00000374610 RPTORQ8N122 1335 aa17.47■□□□□ 0.39
PFDN6-203ENST00000374610 LOC102724159A0A0B4J2E5 919 aa17.46■□□□□ 0.39
PFDN6-203ENST00000374610 PIK3CDO00329 1044 aa17.46■□□□□ 0.39
PFDN6-203ENST00000374610 PWP2Q15269 919 aaKnown RBP17.46■□□□□ 0.39
PFDN6-203ENST00000374610 MAMDC4Q6UXC1 1216 aa17.46■□□□□ 0.39
PFDN6-203ENST00000374610 EEPD1Q7L9B9 569 aa17.46■□□□□ 0.39
PFDN6-203ENST00000374610 ARMC5Q96C12 935 aa17.46■□□□□ 0.39
PFDN6-203ENST00000374610 ABHD8Q96I13 439 aa17.46■□□□□ 0.39
PFDN6-203ENST00000374610 IWS1Q96ST2 819 aa17.46■□□□□ 0.39
PFDN6-203ENST00000374610 ZMYND12Q9H0C1 365 aa17.46■□□□□ 0.39
PFDN6-203ENST00000374610 ABHD16BQ9H3Z7 469 aa17.46■□□□□ 0.39
PFDN6-203ENST00000374610 PXMP2Q9NR77 195 aa17.46■□□□□ 0.39
PFDN6-203ENST00000374610 COL20A1Q9P218 1284 aa17.46■□□□□ 0.39
PFDN6-203ENST00000374610 SMC3Q9UQE7 1217 aa17.46■□□□□ 0.39
PFDN6-203ENST00000374610 ESYT2A0FGR8 921 aa17.45■□□□□ 0.38
PFDN6-203ENST00000374610 CCDC85CA6NKD9 419 aa17.45■□□□□ 0.38
PFDN6-203ENST00000374610 K7ELQ4 463 aaPredicted RBP17.45■□□□□ 0.38
PFDN6-203ENST00000374610 MEIS2O14770 477 aa17.45■□□□□ 0.38
PFDN6-203ENST00000374610 FOSP01100 380 aaPredicted RBP17.45■□□□□ 0.38
PFDN6-203ENST00000374610 CCL5P13501 91 aa17.45■□□□□ 0.38
PFDN6-203ENST00000374610 CCND2P30279 289 aa17.45■□□□□ 0.38
PFDN6-203ENST00000374610 STXBP2Q15833 593 aa17.45■□□□□ 0.38
PFDN6-203ENST00000374610 PRAMEF19Q5SWL8 479 aa17.45■□□□□ 0.38
PFDN6-203ENST00000374610 MCTP2Q6DN12 878 aa17.45■□□□□ 0.38
PFDN6-203ENST00000374610 TYW1BQ6NUM6 668 aa17.45■□□□□ 0.38
PFDN6-203ENST00000374610 TEX2Q8IWB9 1127 aa17.45■□□□□ 0.38
PFDN6-203ENST00000374610 REXO1Q8N1G1 1221 aaKnown RBP17.45■□□□□ 0.38
PFDN6-203ENST00000374610 ZNF333Q96JL9 665 aa17.45■□□□□ 0.38
PFDN6-203ENST00000374610 AIFM3Q96NN9 605 aa17.45■□□□□ 0.38
PFDN6-203ENST00000374610 PCDHA6Q9UN73 950 aa17.45■□□□□ 0.38
PFDN6-203ENST00000374610 PCDHA8Q9Y5H6 950 aa17.45■□□□□ 0.38
PFDN6-203ENST00000374610 GHRHRQ02643 423 aa17.44■□□□□ 0.38
PFDN6-203ENST00000374610 ACVR2BQ13705 512 aa17.44■□□□□ 0.38
PFDN6-203ENST00000374610 MTFR1Q15390 333 aa17.44■□□□□ 0.38
PFDN6-203ENST00000374610 JAKMIP3Q5VZ66 844 aa17.44■□□□□ 0.38
PFDN6-203ENST00000374610 GALNT17Q6IS24 598 aa17.44■□□□□ 0.38
PFDN6-203ENST00000374610 FAM177A1Q8N128 213 aaPredicted RBP17.44■□□□□ 0.38
PFDN6-203ENST00000374610 C8orf76Q96K31 380 aa17.44■□□□□ 0.38
PFDN6-203ENST00000374610 UNC93B1Q9H1C4 597 aa17.44■□□□□ 0.38
PFDN6-203ENST00000374610 NRBP1Q9UHY1 535 aa17.44■□□□□ 0.38
PFDN6-203ENST00000374610 SNAI1O95863 264 aaPredicted RBP17.43■□□□□ 0.38
PFDN6-203ENST00000374610 NR3C2P08235 984 aa17.43■□□□□ 0.38
PFDN6-203ENST00000374610 CCND3P30281 292 aaPredicted RBP17.43■□□□□ 0.38
PFDN6-203ENST00000374610 ST3GAL1Q11201 340 aa17.43■□□□□ 0.38
PFDN6-203ENST00000374610 AP3B2Q13367 1082 aa17.43■□□□□ 0.38
PFDN6-203ENST00000374610 GNL2Q13823 731 aaKnown RBP17.43■□□□□ 0.38
PFDN6-203ENST00000374610 PGM5Q15124 567 aa17.43■□□□□ 0.38
PFDN6-203ENST00000374610 SAFBQ15424 915 aaKnown RBP eCLIP17.43■□□□□ 0.38
PFDN6-203ENST00000374610 FBXO16Q8IX29 292 aaPredicted RBP17.43■□□□□ 0.38
PFDN6-203ENST00000374610 BLIDQ8IZY5 108 aa17.43■□□□□ 0.38
PFDN6-203ENST00000374610 SNX21Q969T3 373 aa17.43■□□□□ 0.38
PFDN6-203ENST00000374610 FGD4Q96M96 766 aa17.43■□□□□ 0.38
PFDN6-203ENST00000374610 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.43■□□□□ 0.38
PFDN6-203ENST00000374610 FAM184BQ9ULE4 1060 aa17.43■□□□□ 0.38
PFDN6-203ENST00000374610 PCDHA4Q9UN74 947 aa17.43■□□□□ 0.38
PFDN6-203ENST00000374610 KCNJ14Q9UNX9 436 aa17.43■□□□□ 0.38
PFDN6-203ENST00000374610 MSCO60682 206 aa17.42■□□□□ 0.38
PFDN6-203ENST00000374610 CYBAP13498 195 aa17.42■□□□□ 0.38
PFDN6-203ENST00000374610 FDPSP14324 419 aaKnown RBP17.42■□□□□ 0.38
PFDN6-203ENST00000374610 AKR1A1P14550 325 aa17.42■□□□□ 0.38
PFDN6-203ENST00000374610 ZNF76P36508 570 aa17.42■□□□□ 0.38
PFDN6-203ENST00000374610 SEPT14Q6ZU15 432 aa17.42■□□□□ 0.38
PFDN6-203ENST00000374610 PDCD2LQ9BRP1 358 aa17.42■□□□□ 0.38
PFDN6-203ENST00000374610 ANO3Q9BYT9 981 aa17.42■□□□□ 0.38
PFDN6-203ENST00000374610 VTA1Q9NP79 307 aa17.42■□□□□ 0.38
PFDN6-203ENST00000374610 TMEM260Q9NX78 707 aa17.42■□□□□ 0.38
PFDN6-203ENST00000374610 DDX49Q9Y6V7 483 aaKnown RBP17.42■□□□□ 0.38
PFDN6-203ENST00000374610 SEPT4O43236 478 aa17.41■□□□□ 0.38
PFDN6-203ENST00000374610 EIF3JO75822 258 aaKnown RBP17.41■□□□□ 0.38
PFDN6-203ENST00000374610 TFRCP02786 760 aaKnown RBP17.41■□□□□ 0.38
PFDN6-203ENST00000374610 MYCNP04198 464 aaPredicted RBP17.41■□□□□ 0.38
PFDN6-203ENST00000374610 GJB2P29033 226 aa17.41■□□□□ 0.38
PFDN6-203ENST00000374610 KRT2P35908 639 aa17.41■□□□□ 0.38
PFDN6-203ENST00000374610 MAP3K21Q5TCX8 1036 aa17.41■□□□□ 0.38
PFDN6-203ENST00000374610 PGBD1Q96JS3 809 aa17.41■□□□□ 0.38
PFDN6-203ENST00000374610 DEFB118Q96PH6 123 aa17.41■□□□□ 0.38
PFDN6-203ENST00000374610 PHF20Q9BVI0 1012 aa17.41■□□□□ 0.38
PFDN6-203ENST00000374610 FOXD4L1Q9NU39 408 aa17.41■□□□□ 0.38
PFDN6-203ENST00000374610 ASTN1O14525 1302 aa17.41■□□□□ 0.38
PFDN6-203ENST00000374610 CCDC194A0A1B0GVG4 234 aa17.4■□□□□ 0.38
PFDN6-203ENST00000374610 H3BQV1 296 aa17.4■□□□□ 0.38
PFDN6-203ENST00000374610 RARBP10826 455 aa17.4■□□□□ 0.38
PFDN6-203ENST00000374610 GUCY1B3Q02153 619 aa17.4■□□□□ 0.38
PFDN6-203ENST00000374610 BECN1Q14457 450 aa17.4■□□□□ 0.38
PFDN6-203ENST00000374610 CCDC144BQ3MJ40 725 aa17.4■□□□□ 0.38
PFDN6-203ENST00000374610 GNPTABQ3T906 1256 aa17.4■□□□□ 0.38
PFDN6-203ENST00000374610 IFFO2Q5TF58 517 aa17.4■□□□□ 0.38
PFDN6-203ENST00000374610 ANO1Q5XXA6 986 aa17.4■□□□□ 0.38
PFDN6-203ENST00000374610 XRRA1Q6P2D8 792 aa17.4■□□□□ 0.38
PFDN6-203ENST00000374610 RASGRP4Q8TDF6 673 aa17.4■□□□□ 0.38
PFDN6-203ENST00000374610 MORC4Q8TE76 937 aa17.4■□□□□ 0.38
PFDN6-203ENST00000374610 SPC25Q9HBM1 224 aa17.4■□□□□ 0.38
PFDN6-203ENST00000374610 RTEL1Q9NZ71 1219 aa17.4■□□□□ 0.38
PFDN6-203ENST00000374610 DDX20Q9UHI6 824 aaKnown RBP17.4■□□□□ 0.38
PFDN6-203ENST00000374610 STAM2O75886 525 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms