RNA–Protein interactions for RNA: ENST00000373514.2

CDX4-201, Transcript of caudal type homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX4, Length 1,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4-201ENST00000373514 PGBD1Q96JS3 809 aa21.29■■□□□ 1
CDX4-201ENST00000373514 RIC8AQ9NPQ8 531 aa21.29■■□□□ 1
CDX4-201ENST00000373514 TMEM260Q9NX78 707 aa21.29■■□□□ 1
CDX4-201ENST00000373514 SYNGAP1Q96PV0 1343 aa21.28■■□□□ 1
CDX4-201ENST00000373514 HSP90AA1P07900 732 aaKnown RBP21.28■■□□□ 1
CDX4-201ENST00000373514 IL31RAQ8NI17 732 aa21.28■■□□□ 1
CDX4-201ENST00000373514 CUL5Q93034 780 aa21.28■■□□□ 1
CDX4-201ENST00000373514 RMDN3Q96TC7 470 aa21.28■■□□□ 1
CDX4-201ENST00000373514 PXMP2Q9NR77 195 aa21.28■■□□□ 1
CDX4-201ENST00000373514 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.28■■□□□ 1
CDX4-201ENST00000373514 PIK3CDO00329 1044 aa21.27■■□□□ 1
CDX4-201ENST00000373514 EEPD1Q7L9B9 569 aa21.27■■□□□ 1
CDX4-201ENST00000373514 DNERQ8NFT8 737 aa21.27■■□□□ 1
CDX4-201ENST00000373514 ALG1Q9BT22 464 aa21.27■■□□□ 1
CDX4-201ENST00000373514 ADD3Q9UEY8 706 aaKnown RBP21.27■■□□□ 1
CDX4-201ENST00000373514 KCNJ14Q9UNX9 436 aa21.27■■□□□ 1
CDX4-201ENST00000373514 ESYT2A0FGR8 921 aa21.26■□□□□ 0.99
CDX4-201ENST00000373514 CCL5P13501 91 aa21.26■□□□□ 0.99
CDX4-201ENST00000373514 FBXO16Q8IX29 292 aaPredicted RBP21.26■□□□□ 0.99
CDX4-201ENST00000373514 CCDC148Q8NFR7 591 aa21.26■□□□□ 0.99
CDX4-201ENST00000373514 RASGRP4Q8TDF6 673 aa21.26■□□□□ 0.99
CDX4-201ENST00000373514 MAF1Q9H063 256 aa21.26■□□□□ 0.99
CDX4-201ENST00000373514 KATNBL1Q9H079 304 aa21.26■□□□□ 0.99
CDX4-201ENST00000373514 ZMYND12Q9H0C1 365 aa21.26■□□□□ 0.99
CDX4-201ENST00000373514 MAP3K20Q9NYL2 800 aaKnown RBP21.26■□□□□ 0.99
CDX4-201ENST00000373514 FRMPD4Q14CM0 1322 aa21.26■□□□□ 0.99
CDX4-201ENST00000373514 ASB14A6NK59 587 aa21.25■□□□□ 0.99
CDX4-201ENST00000373514 ARHGEF16Q5VV41 709 aa21.25■□□□□ 0.99
CDX4-201ENST00000373514 MSL3Q8N5Y2 521 aaKnown RBP21.25■□□□□ 0.99
CDX4-201ENST00000373514 SAMD3Q8N6K7 520 aa21.25■□□□□ 0.99
CDX4-201ENST00000373514 NSUN6Q8TEA1 469 aaKnown RBP21.25■□□□□ 0.99
CDX4-201ENST00000373514 CCDC12Q8WUD4 166 aaPredicted RBP21.25■□□□□ 0.99
CDX4-201ENST00000373514 ZFP91Q96JP5 570 aaPredicted RBP21.25■□□□□ 0.99
CDX4-201ENST00000373514 LLPHQ9BRT6 129 aaKnown RBP21.25■□□□□ 0.99
CDX4-201ENST00000373514 SH3GLB2Q9NR46 395 aa21.25■□□□□ 0.99
CDX4-201ENST00000373514 FOXD4L1Q9NU39 408 aa21.25■□□□□ 0.99
CDX4-201ENST00000373514 ZHX1Q9UKY1 873 aaPredicted RBP21.25■□□□□ 0.99
CDX4-201ENST00000373514 BRCA2P51587 3418 aa21.25■□□□□ 0.99
CDX4-201ENST00000373514 RPTORQ8N122 1335 aa21.25■□□□□ 0.99
CDX4-201ENST00000373514 ZNF865P0CJ78 1059 aaPredicted RBP21.24■□□□□ 0.99
CDX4-201ENST00000373514 EDNRBP24530 442 aa21.24■□□□□ 0.99
CDX4-201ENST00000373514 PGM5Q15124 567 aa21.24■□□□□ 0.99
CDX4-201ENST00000373514 NPY5RQ15761 445 aa21.24■□□□□ 0.99
CDX4-201ENST00000373514 MORC4Q8TE76 937 aa21.24■□□□□ 0.99
CDX4-201ENST00000373514 LENG1Q96BZ8 264 aaPredicted RBP21.24■□□□□ 0.99
CDX4-201ENST00000373514 PDCD2LQ9BRP1 358 aa21.24■□□□□ 0.99
CDX4-201ENST00000373514 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.24■□□□□ 0.99
CDX4-201ENST00000373514 C6orf50Q9HD87 102 aa21.24■□□□□ 0.99
CDX4-201ENST00000373514 CNGA1P29973 690 aa21.24■□□□□ 0.99
CDX4-201ENST00000373514 CLK2P49760 499 aaKnown RBP21.24■□□□□ 0.99
CDX4-201ENST00000373514 NLRP5P59047 1200 aa21.24■□□□□ 0.99
CDX4-201ENST00000373514 PDE4DQ08499 809 aa21.24■□□□□ 0.99
CDX4-201ENST00000373514 CUL4AQ13619 759 aa21.24■□□□□ 0.99
CDX4-201ENST00000373514 JAKMIP3Q5VZ66 844 aa21.24■□□□□ 0.99
CDX4-201ENST00000373514 RNF208Q9H0X6 261 aa21.24■□□□□ 0.99
CDX4-201ENST00000373514 CNPY2Q9Y2B0 182 aa21.24■□□□□ 0.99
CDX4-201ENST00000373514 ADCY6O43306 1168 aa21.23■□□□□ 0.99
CDX4-201ENST00000373514 MRPL12P52815 198 aaKnown RBP21.23■□□□□ 0.99
CDX4-201ENST00000373514 ANO1Q5XXA6 986 aa21.23■□□□□ 0.99
CDX4-201ENST00000373514 WASF1Q92558 559 aa21.23■□□□□ 0.99
CDX4-201ENST00000373514 PHF20Q9BVI0 1012 aa21.23■□□□□ 0.99
CDX4-201ENST00000373514 HMX1Q9NP08 348 aaPredicted RBP21.23■□□□□ 0.99
CDX4-201ENST00000373514 PDGFCQ9NRA1 345 aa21.23■□□□□ 0.99
CDX4-201ENST00000373514 PCDHA6Q9UN73 950 aa21.23■□□□□ 0.99
CDX4-201ENST00000373514 PCDHA8Q9Y5H6 950 aa21.23■□□□□ 0.99
CDX4-201ENST00000373514 NR3C2P08235 984 aa21.22■□□□□ 0.99
CDX4-201ENST00000373514 MYCLP12524 364 aaPredicted RBP21.22■□□□□ 0.99
CDX4-201ENST00000373514 PTGS1P23219 599 aa21.22■□□□□ 0.99
CDX4-201ENST00000373514 ACVR2BQ13705 512 aa21.22■□□□□ 0.99
CDX4-201ENST00000373514 REXO1Q8N1G1 1221 aaKnown RBP21.22■□□□□ 0.99
CDX4-201ENST00000373514 ANO3Q9BYT9 981 aa21.22■□□□□ 0.99
CDX4-201ENST00000373514 PAK6Q9NQU5 681 aaPredicted RBP21.22■□□□□ 0.99
CDX4-201ENST00000373514 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.21■□□□□ 0.99
CDX4-201ENST00000373514 SPDYE3A6NKU9 549 aa21.21■□□□□ 0.99
CDX4-201ENST00000373514 GUCY1B3Q02153 619 aa21.21■□□□□ 0.99
CDX4-201ENST00000373514 TMEM63BQ5T3F8 832 aa21.21■□□□□ 0.99
CDX4-201ENST00000373514 OXER1Q8TDS5 423 aa21.21■□□□□ 0.99
CDX4-201ENST00000373514 ABHD16BQ9H3Z7 469 aa21.21■□□□□ 0.99
CDX4-201ENST00000373514 PCDHA4Q9UN74 947 aa21.21■□□□□ 0.99
CDX4-201ENST00000373514 KIAA0100Q14667 2235 aaKnown RBP21.2■□□□□ 0.99
CDX4-201ENST00000373514 GNA11P29992 359 aa21.2■□□□□ 0.98
CDX4-201ENST00000373514 HMGN5P82970 282 aaKnown RBP21.2■□□□□ 0.98
CDX4-201ENST00000373514 CCDC144BQ3MJ40 725 aa21.2■□□□□ 0.98
CDX4-201ENST00000373514 DAGLBQ8NCG7 672 aa21.2■□□□□ 0.98
CDX4-201ENST00000373514 DEFB118Q96PH6 123 aa21.2■□□□□ 0.98
CDX4-201ENST00000373514 LOC102724159A0A0B4J2E5 919 aa21.19■□□□□ 0.98
CDX4-201ENST00000373514 POTEFA5A3E0 1075 aa21.19■□□□□ 0.98
CDX4-201ENST00000373514 CCDC85CA6NKD9 419 aa21.19■□□□□ 0.98
CDX4-201ENST00000373514 GJB2P29033 226 aa21.19■□□□□ 0.98
CDX4-201ENST00000373514 ADCYAP1R1P41586 468 aa21.19■□□□□ 0.98
CDX4-201ENST00000373514 MRPS9P82933 396 aaKnown RBP21.19■□□□□ 0.98
CDX4-201ENST00000373514 AP3B2Q13367 1082 aa21.19■□□□□ 0.98
CDX4-201ENST00000373514 PWP2Q15269 919 aaKnown RBP21.19■□□□□ 0.98
CDX4-201ENST00000373514 KRT40Q6A162 431 aa21.19■□□□□ 0.98
CDX4-201ENST00000373514 TAPT1Q6NXT6 567 aa21.19■□□□□ 0.98
CDX4-201ENST00000373514 BLIDQ8IZY5 108 aa21.19■□□□□ 0.98
CDX4-201ENST00000373514 IWS1Q96ST2 819 aa21.19■□□□□ 0.98
CDX4-201ENST00000373514 MPHOSPH6Q99547 160 aaKnown RBP21.19■□□□□ 0.98
CDX4-201ENST00000373514 GLT8D2Q9H1C3 349 aa21.19■□□□□ 0.98
CDX4-201ENST00000373514 VTA1Q9NP79 307 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms