RNA–Protein interactions for RNA: ENST00000373482.6

PBX3-202, Transcript of PBX homeobox 3, humanhuman

TSL 1 (best)

Gene PBX3, Length 1,130 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-202ENST00000373482 COL20A1Q9P218 1284 aa21.05■□□□□ 0.96
PBX3-202ENST00000373482 ORC3Q9UBD5 711 aaPredicted RBP21.05■□□□□ 0.96
PBX3-202ENST00000373482 ASTN1O14525 1302 aa21.04■□□□□ 0.96
PBX3-202ENST00000373482 ESYT2A0FGR8 921 aa21.04■□□□□ 0.96
PBX3-202ENST00000373482 MEIS2O14770 477 aa21.04■□□□□ 0.96
PBX3-202ENST00000373482 CD2BP2O95400 341 aaKnown RBP21.04■□□□□ 0.96
PBX3-202ENST00000373482 CYBAP13498 195 aa21.04■□□□□ 0.96
PBX3-202ENST00000373482 GNA11P29992 359 aa21.04■□□□□ 0.96
PBX3-202ENST00000373482 PDE4DQ08499 809 aa21.04■□□□□ 0.96
PBX3-202ENST00000373482 TYW1BQ6NUM6 668 aa21.04■□□□□ 0.96
PBX3-202ENST00000373482 USP17L6PQ6QN14 398 aa21.04■□□□□ 0.96
PBX3-202ENST00000373482 FAM177A1Q8N128 213 aaPredicted RBP21.04■□□□□ 0.96
PBX3-202ENST00000373482 IWS1Q96ST2 819 aa21.04■□□□□ 0.96
PBX3-202ENST00000373482 LLPHQ9BRT6 129 aaKnown RBP21.04■□□□□ 0.96
PBX3-202ENST00000373482 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.04■□□□□ 0.96
PBX3-202ENST00000373482 UNC93B1Q9H1C4 597 aa21.04■□□□□ 0.96
PBX3-202ENST00000373482 PXMP2Q9NR77 195 aa21.04■□□□□ 0.96
PBX3-202ENST00000373482 DOCK5Q9H7D0 1870 aa21.04■□□□□ 0.96
PBX3-202ENST00000373482 CCDC85CA6NKD9 419 aa21.03■□□□□ 0.96
PBX3-202ENST00000373482 SPDYE3A6NKU9 549 aa21.03■□□□□ 0.96
PBX3-202ENST00000373482 SNAI1O95863 264 aaPredicted RBP21.03■□□□□ 0.96
PBX3-202ENST00000373482 EIF2AK2P19525 551 aaKnown RBP21.03■□□□□ 0.96
PBX3-202ENST00000373482 BICD2Q8TD16 824 aa21.03■□□□□ 0.96
PBX3-202ENST00000373482 MORC4Q8TE76 937 aa21.03■□□□□ 0.96
PBX3-202ENST00000373482 TMX3Q96JJ7 454 aa21.03■□□□□ 0.96
PBX3-202ENST00000373482 ZMYND12Q9H0C1 365 aa21.03■□□□□ 0.96
PBX3-202ENST00000373482 EHMT1Q9H9B1 1298 aa21.03■□□□□ 0.96
PBX3-202ENST00000373482 VPS54Q9P1Q0 977 aa21.03■□□□□ 0.96
PBX3-202ENST00000373482 CCND3P30281 292 aaPredicted RBP21.02■□□□□ 0.96
PBX3-202ENST00000373482 NLRP5P59047 1200 aa21.02■□□□□ 0.96
PBX3-202ENST00000373482 ST3GAL1Q11201 340 aa21.02■□□□□ 0.96
PBX3-202ENST00000373482 ACVR2BQ13705 512 aa21.02■□□□□ 0.96
PBX3-202ENST00000373482 UBE2SQ16763 222 aa21.02■□□□□ 0.96
PBX3-202ENST00000373482 PRAMEF19Q5SWL8 479 aa21.02■□□□□ 0.96
PBX3-202ENST00000373482 ZHX1Q9UKY1 873 aaPredicted RBP21.02■□□□□ 0.96
PBX3-202ENST00000373482 MSCO60682 206 aa21.01■□□□□ 0.95
PBX3-202ENST00000373482 FOSP01100 380 aaPredicted RBP21.01■□□□□ 0.95
PBX3-202ENST00000373482 HMGN5P82970 282 aaKnown RBP21.01■□□□□ 0.95
PBX3-202ENST00000373482 STXBP2Q15833 593 aa21.01■□□□□ 0.95
PBX3-202ENST00000373482 MCTP2Q6DN12 878 aa21.01■□□□□ 0.95
PBX3-202ENST00000373482 TRPV1Q8NER1 839 aa21.01■□□□□ 0.95
PBX3-202ENST00000373482 VTA1Q9NP79 307 aa21.01■□□□□ 0.95
PBX3-202ENST00000373482 PAK6Q9NQU5 681 aaPredicted RBP21.01■□□□□ 0.95
PBX3-202ENST00000373482 SEPT4O43236 478 aa21■□□□□ 0.95
PBX3-202ENST00000373482 JAK2O60674 1132 aa21■□□□□ 0.95
PBX3-202ENST00000373482 GJB1P08034 283 aa21■□□□□ 0.95
PBX3-202ENST00000373482 NR3C2P08235 984 aa21■□□□□ 0.95
PBX3-202ENST00000373482 ZNF865P0CJ78 1059 aaPredicted RBP21■□□□□ 0.95
PBX3-202ENST00000373482 EDNRBP24530 442 aa21■□□□□ 0.95
PBX3-202ENST00000373482 AP3B2Q13367 1082 aa21■□□□□ 0.95
PBX3-202ENST00000373482 PGM5Q15124 567 aa21■□□□□ 0.95
PBX3-202ENST00000373482 EEPD1Q7L9B9 569 aa21■□□□□ 0.95
PBX3-202ENST00000373482 AIFM3Q96NN9 605 aa21■□□□□ 0.95
PBX3-202ENST00000373482 PDCD2LQ9BRP1 358 aa21■□□□□ 0.95
PBX3-202ENST00000373482 ALG1Q9BT22 464 aa21■□□□□ 0.95
PBX3-202ENST00000373482 DTNBO60941 627 aa20.99■□□□□ 0.95
PBX3-202ENST00000373482 MYCLP12524 364 aaPredicted RBP20.99■□□□□ 0.95
PBX3-202ENST00000373482 FDPSP14324 419 aaKnown RBP20.99■□□□□ 0.95
PBX3-202ENST00000373482 AKR1A1P14550 325 aa20.99■□□□□ 0.95
PBX3-202ENST00000373482 CCND2P30279 289 aa20.99■□□□□ 0.95
PBX3-202ENST00000373482 GALNT17Q6IS24 598 aa20.99■□□□□ 0.95
PBX3-202ENST00000373482 FBXO16Q8IX29 292 aaPredicted RBP20.99■□□□□ 0.95
PBX3-202ENST00000373482 REXO1Q8N1G1 1221 aaKnown RBP20.99■□□□□ 0.95
PBX3-202ENST00000373482 FAM184AQ8NB25 1140 aa20.99■□□□□ 0.95
PBX3-202ENST00000373482 DEFB118Q96PH6 123 aa20.99■□□□□ 0.95
PBX3-202ENST00000373482 DDX20Q9UHI6 824 aaKnown RBP20.99■□□□□ 0.95
PBX3-202ENST00000373482 FAM184BQ9ULE4 1060 aa20.99■□□□□ 0.95
PBX3-202ENST00000373482 PCDHA6Q9UN73 950 aa20.99■□□□□ 0.95
PBX3-202ENST00000373482 PCDHA8Q9Y5H6 950 aa20.99■□□□□ 0.95
PBX3-202ENST00000373482 FRMPD4Q14CM0 1322 aa20.99■□□□□ 0.95
PBX3-202ENST00000373482 CAPN2P17655 700 aa20.98■□□□□ 0.95
PBX3-202ENST00000373482 CLK2P49760 499 aaKnown RBP20.98■□□□□ 0.95
PBX3-202ENST00000373482 TRIM29Q14134 588 aa20.98■□□□□ 0.95
PBX3-202ENST00000373482 CCDC144BQ3MJ40 725 aa20.98■□□□□ 0.95
PBX3-202ENST00000373482 KATNBL1Q9H079 304 aa20.98■□□□□ 0.95
PBX3-202ENST00000373482 DDX49Q9Y6V7 483 aaKnown RBP20.98■□□□□ 0.95
PBX3-202ENST00000373482 EIF3JO75822 258 aaKnown RBP20.97■□□□□ 0.95
PBX3-202ENST00000373482 SGPL1O95470 568 aa20.97■□□□□ 0.95
PBX3-202ENST00000373482 PHF20Q9BVI0 1012 aa20.97■□□□□ 0.95
PBX3-202ENST00000373482 PCDHA4Q9UN74 947 aa20.97■□□□□ 0.95
PBX3-202ENST00000373482 KIF3AQ9Y496 699 aa20.97■□□□□ 0.95
PBX3-202ENST00000373482 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.97■□□□□ 0.95
PBX3-202ENST00000373482 STAM2O75886 525 aa20.96■□□□□ 0.95
PBX3-202ENST00000373482 RARBP10826 455 aa20.96■□□□□ 0.95
PBX3-202ENST00000373482 GJA8P48165 433 aa20.96■□□□□ 0.95
PBX3-202ENST00000373482 JAKMIP3Q5VZ66 844 aa20.96■□□□□ 0.95
PBX3-202ENST00000373482 IQSEC1Q6DN90 963 aa20.96■□□□□ 0.95
PBX3-202ENST00000373482 XRRA1Q6P2D8 792 aa20.96■□□□□ 0.95
PBX3-202ENST00000373482 VSIG10LQ86VR7 867 aa20.96■□□□□ 0.95
PBX3-202ENST00000373482 BLIDQ8IZY5 108 aa20.96■□□□□ 0.95
PBX3-202ENST00000373482 U2AF1L4Q8WU68 220 aaKnown RBP20.96■□□□□ 0.95
PBX3-202ENST00000373482 ANO3Q9BYT9 981 aa20.96■□□□□ 0.95
PBX3-202ENST00000373482 TMEM260Q9NX78 707 aa20.96■□□□□ 0.95
PBX3-202ENST00000373482 K7ELQ4 463 aaPredicted RBP20.95■□□□□ 0.94
PBX3-202ENST00000373482 TFRCP02786 760 aaKnown RBP20.95■□□□□ 0.94
PBX3-202ENST00000373482 TNFAIP2Q03169 654 aa20.95■□□□□ 0.94
PBX3-202ENST00000373482 PCNX4Q63HM2 1172 aa20.95■□□□□ 0.94
PBX3-202ENST00000373482 TAPT1Q6NXT6 567 aa20.95■□□□□ 0.94
PBX3-202ENST00000373482 HSCBQ8IWL3 235 aa20.95■□□□□ 0.94
PBX3-202ENST00000373482 DAGLBQ8NCG7 672 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms