RNA–Protein interactions for RNA: ENST00000372541.1

SNX21-203, Transcript of sorting nexin family member 21, humanhuman

TSL 2 BASIC

Gene SNX21, Length 771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-203ENST00000372541 COL20A1Q9P218 1284 aa17.29■□□□□ 0.36
SNX21-203ENST00000372541 DDX49Q9Y6V7 483 aaKnown RBP17.29■□□□□ 0.36
SNX21-203ENST00000372541 LRRC37A2A6NM11 1700 aa17.29■□□□□ 0.36
SNX21-203ENST00000372541 EDNRBP24530 442 aa17.28■□□□□ 0.36
SNX21-203ENST00000372541 HOXA13P31271 388 aaPredicted RBP17.28■□□□□ 0.36
SNX21-203ENST00000372541 CCT2P78371 535 aaKnown RBP17.28■□□□□ 0.36
SNX21-203ENST00000372541 CCDC144BQ3MJ40 725 aa17.28■□□□□ 0.36
SNX21-203ENST00000372541 LRIT3Q3SXY7 679 aa17.28■□□□□ 0.36
SNX21-203ENST00000372541 ARHGEF16Q5VV41 709 aa17.28■□□□□ 0.36
SNX21-203ENST00000372541 EEPD1Q7L9B9 569 aa17.28■□□□□ 0.36
SNX21-203ENST00000372541 FBXO16Q8IX29 292 aaPredicted RBP17.28■□□□□ 0.36
SNX21-203ENST00000372541 GPKOWQ92917 476 aaPredicted RBP eCLIP17.28■□□□□ 0.36
SNX21-203ENST00000372541 LARP6Q9BRS8 491 aaKnown RBP17.28■□□□□ 0.36
SNX21-203ENST00000372541 C22orf23Q9BZE7 217 aa17.28■□□□□ 0.36
SNX21-203ENST00000372541 KATNBL1Q9H079 304 aa17.28■□□□□ 0.36
SNX21-203ENST00000372541 NCOA5Q9HCD5 579 aaKnown RBP17.28■□□□□ 0.36
SNX21-203ENST00000372541 XPNPEP3Q9NQH7 507 aa17.28■□□□□ 0.36
SNX21-203ENST00000372541 V9GY48 417 aaPredicted RBP17.28■□□□□ 0.36
SNX21-203ENST00000372541 BAZ2BQ9UIF8 2168 aaKnown RBP17.28■□□□□ 0.36
SNX21-203ENST00000372541 FRMPD3Q5JV73 1810 aa17.27■□□□□ 0.36
SNX21-203ENST00000372541 CPLX1O14810 134 aa17.27■□□□□ 0.36
SNX21-203ENST00000372541 EIF2AK2P19525 551 aaKnown RBP17.27■□□□□ 0.36
SNX21-203ENST00000372541 NEK4P51957 841 aa17.27■□□□□ 0.36
SNX21-203ENST00000372541 AK2P54819 239 aa17.27■□□□□ 0.36
SNX21-203ENST00000372541 STK3Q13188 491 aa17.27■□□□□ 0.36
SNX21-203ENST00000372541 WWC2Q6AWC2 1192 aa17.27■□□□□ 0.36
SNX21-203ENST00000372541 PPP1R18Q6NYC8 613 aa17.27■□□□□ 0.36
SNX21-203ENST00000372541 C7orf61Q8IZ16 206 aa17.27■□□□□ 0.36
SNX21-203ENST00000372541 DEFB123Q8N688 67 aa17.27■□□□□ 0.36
SNX21-203ENST00000372541 CUL5Q93034 780 aa17.27■□□□□ 0.36
SNX21-203ENST00000372541 LENG1Q96BZ8 264 aaPredicted RBP17.27■□□□□ 0.36
SNX21-203ENST00000372541 TAAR1Q96RJ0 339 aa17.27■□□□□ 0.36
SNX21-203ENST00000372541 ZMYND8Q9ULU4 1186 aaPredicted RBP17.27■□□□□ 0.36
SNX21-203ENST00000372541 MYCNP04198 464 aaPredicted RBP17.26■□□□□ 0.35
SNX21-203ENST00000372541 IFNAR1P17181 557 aa17.26■□□□□ 0.35
SNX21-203ENST00000372541 NAPAP54920 295 aa17.26■□□□□ 0.35
SNX21-203ENST00000372541 AKAP17AQ02040 695 aaKnown RBP17.26■□□□□ 0.35
SNX21-203ENST00000372541 CPLX2Q6PUV4 134 aaKnown RBP17.26■□□□□ 0.35
SNX21-203ENST00000372541 ARRDC4Q8NCT1 418 aa17.26■□□□□ 0.35
SNX21-203ENST00000372541 SMARCC2Q8TAQ2 1214 aa17.26■□□□□ 0.35
SNX21-203ENST00000372541 IWS1Q96ST2 819 aa17.26■□□□□ 0.35
SNX21-203ENST00000372541 PSTPIP2Q9H939 334 aa17.26■□□□□ 0.35
SNX21-203ENST00000372541 PXMP2Q9NR77 195 aa17.26■□□□□ 0.35
SNX21-203ENST00000372541 STXBP5LQ9Y2K9 1186 aa17.26■□□□□ 0.35
SNX21-203ENST00000372541 UNC80Q8N2C7 3258 aa17.25■□□□□ 0.35
SNX21-203ENST00000372541 KBTBD13C9JR72 458 aa17.25■□□□□ 0.35
SNX21-203ENST00000372541 DNM1LO00429 736 aa17.25■□□□□ 0.35
SNX21-203ENST00000372541 ADCYAP1R1P41586 468 aa17.25■□□□□ 0.35
SNX21-203ENST00000372541 RBM25P49756 843 aaKnown RBP17.25■□□□□ 0.35
SNX21-203ENST00000372541 TNFAIP2Q03169 654 aa17.25■□□□□ 0.35
SNX21-203ENST00000372541 NTRK3Q16288 839 aa17.25■□□□□ 0.35
SNX21-203ENST00000372541 PFKFB3Q16875 520 aaPredicted RBP17.25■□□□□ 0.35
SNX21-203ENST00000372541 NOL8Q76FK4 1167 aaKnown RBP17.25■□□□□ 0.35
SNX21-203ENST00000372541 Q7L0L9 218 aa17.25■□□□□ 0.35
SNX21-203ENST00000372541 FCHSD1Q86WN1 690 aa17.25■□□□□ 0.35
SNX21-203ENST00000372541 PHKBQ93100 1093 aa17.25■□□□□ 0.35
SNX21-203ENST00000372541 RNF26Q9BY78 433 aaPredicted RBP17.25■□□□□ 0.35
SNX21-203ENST00000372541 SLKQ9H2G2 1235 aaPredicted RBP17.25■□□□□ 0.35
SNX21-203ENST00000372541 C11orf49Q9H6J7 331 aa17.25■□□□□ 0.35
SNX21-203ENST00000372541 BARHL2Q9NY43 387 aa17.25■□□□□ 0.35
SNX21-203ENST00000372541 TPCN1Q9ULQ1 816 aa17.25■□□□□ 0.35
SNX21-203ENST00000372541 SYNRGQ9UMZ2 1314 aa17.24■□□□□ 0.35
SNX21-203ENST00000372541 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.24■□□□□ 0.35
SNX21-203ENST00000372541 PIK3CDO00329 1044 aa17.24■□□□□ 0.35
SNX21-203ENST00000372541 PRPF3O43395 683 aaKnown RBP17.24■□□□□ 0.35
SNX21-203ENST00000372541 DUSP11O75319 330 aaKnown RBP17.24■□□□□ 0.35
SNX21-203ENST00000372541 PGK1P00558 417 aa17.24■□□□□ 0.35
SNX21-203ENST00000372541 SCG2P13521 617 aa17.24■□□□□ 0.35
SNX21-203ENST00000372541 MAGEA10P43363 369 aaPredicted RBP17.24■□□□□ 0.35
SNX21-203ENST00000372541 STXBP2Q15833 593 aa17.24■□□□□ 0.35
SNX21-203ENST00000372541 GJC2Q5T442 439 aaPredicted RBP17.24■□□□□ 0.35
SNX21-203ENST00000372541 TAPT1Q6NXT6 567 aa17.24■□□□□ 0.35
SNX21-203ENST00000372541 USP17L6PQ6QN14 398 aa17.24■□□□□ 0.35
SNX21-203ENST00000372541 RNF180Q86T96 592 aa17.24■□□□□ 0.35
SNX21-203ENST00000372541 TRIM22Q8IYM9 498 aa17.24■□□□□ 0.35
SNX21-203ENST00000372541 TDHQ8IZJ6 230 aa17.24■□□□□ 0.35
SNX21-203ENST00000372541 PDCD2LQ9BRP1 358 aa17.24■□□□□ 0.35
SNX21-203ENST00000372541 SLC26A6Q9BXS9 759 aa17.24■□□□□ 0.35
SNX21-203ENST00000372541 PDGFCQ9NRA1 345 aa17.24■□□□□ 0.35
SNX21-203ENST00000372541 MTMR10Q9NXD2 777 aa17.24■□□□□ 0.35
SNX21-203ENST00000372541 MCM3APO60318 1980 aa17.24■□□□□ 0.35
SNX21-203ENST00000372541 STXBP3O00186 592 aa17.23■□□□□ 0.35
SNX21-203ENST00000372541 MEIS2O14770 477 aa17.23■□□□□ 0.35
SNX21-203ENST00000372541 ADCY6O43306 1168 aa17.23■□□□□ 0.35
SNX21-203ENST00000372541 PPFIA3O75145 1194 aa17.23■□□□□ 0.35
SNX21-203ENST00000372541 CDKL5O76039 1030 aa17.23■□□□□ 0.35
SNX21-203ENST00000372541 NR3C2P08235 984 aa17.23■□□□□ 0.35
SNX21-203ENST00000372541 SYN1P17600 705 aa17.23■□□□□ 0.35
SNX21-203ENST00000372541 PGM5Q15124 567 aa17.23■□□□□ 0.35
SNX21-203ENST00000372541 LRRC41Q15345 812 aa17.23■□□□□ 0.35
SNX21-203ENST00000372541 IQSEC1Q6DN90 963 aa17.23■□□□□ 0.35
SNX21-203ENST00000372541 SCFD2Q8WU76 684 aa17.23■□□□□ 0.35
SNX21-203ENST00000372541 CCDC12Q8WUD4 166 aaPredicted RBP17.23■□□□□ 0.35
SNX21-203ENST00000372541 SPC25Q9HBM1 224 aa17.23■□□□□ 0.35
SNX21-203ENST00000372541 FRMPD4Q14CM0 1322 aa17.22■□□□□ 0.35
SNX21-203ENST00000372541 ALPK3Q96L96 1907 aa17.22■□□□□ 0.35
SNX21-203ENST00000372541 PFKFB2O60825 505 aa17.22■□□□□ 0.35
SNX21-203ENST00000372541 ADAMTS4O75173 837 aa17.22■□□□□ 0.35
SNX21-203ENST00000372541 SMPD1P17405 629 aa17.22■□□□□ 0.35
SNX21-203ENST00000372541 CCND2P30279 289 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms