RNA–Protein interactions for RNA: ENST00000372242.7

TMEM53-203, Transcript of transmembrane protein 53, humanhuman

TSL 3 BASIC

Gene TMEM53, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-203ENST00000372242 PCDHA4Q9UN74 947 aa18.72■□□□□ 0.59
TMEM53-203ENST00000372242 GRK4P32298 578 aa18.71■□□□□ 0.59
TMEM53-203ENST00000372242 ARHGEF16Q5VV41 709 aa18.71■□□□□ 0.59
TMEM53-203ENST00000372242 FBXO46Q6PJ61 603 aaPredicted RBP18.71■□□□□ 0.59
TMEM53-203ENST00000372242 BLIDQ8IZY5 108 aa18.71■□□□□ 0.59
TMEM53-203ENST00000372242 DNERQ8NFT8 737 aa18.71■□□□□ 0.59
TMEM53-203ENST00000372242 OXER1Q8TDS5 423 aa18.71■□□□□ 0.59
TMEM53-203ENST00000372242 PXYLP1Q8TE99 480 aa18.71■□□□□ 0.59
TMEM53-203ENST00000372242 NSUN6Q8TEA1 469 aaKnown RBP18.71■□□□□ 0.59
TMEM53-203ENST00000372242 TINF2Q9BSI4 451 aa18.71■□□□□ 0.59
TMEM53-203ENST00000372242 PXMP2Q9NR77 195 aa18.71■□□□□ 0.59
TMEM53-203ENST00000372242 PCDHA6Q9UN73 950 aa18.71■□□□□ 0.59
TMEM53-203ENST00000372242 PCDHA8Q9Y5H6 950 aa18.71■□□□□ 0.59
TMEM53-203ENST00000372242 SPDYE3A6NKU9 549 aa18.7■□□□□ 0.58
TMEM53-203ENST00000372242 BECN1Q14457 450 aa18.7■□□□□ 0.58
TMEM53-203ENST00000372242 PKN2Q16513 984 aaKnown RBP18.7■□□□□ 0.58
TMEM53-203ENST00000372242 OLFML2BQ68BL8 750 aa18.7■□□□□ 0.58
TMEM53-203ENST00000372242 ZNF467Q7Z7K2 595 aaPredicted RBP18.7■□□□□ 0.58
TMEM53-203ENST00000372242 FAM177A1Q8N128 213 aaPredicted RBP18.7■□□□□ 0.58
TMEM53-203ENST00000372242 FBXO18Q8NFZ0 1043 aa18.7■□□□□ 0.58
TMEM53-203ENST00000372242 IL31RAQ8NI17 732 aa18.7■□□□□ 0.58
TMEM53-203ENST00000372242 BICD2Q8TD16 824 aa18.7■□□□□ 0.58
TMEM53-203ENST00000372242 KIF3AQ9Y496 699 aa18.7■□□□□ 0.58
TMEM53-203ENST00000372242 MCM3APO60318 1980 aa18.7■□□□□ 0.58
TMEM53-203ENST00000372242 IGHA2P01877 340 aa18.7■□□□□ 0.58
TMEM53-203ENST00000372242 MMP1P03956 469 aa18.7■□□□□ 0.58
TMEM53-203ENST00000372242 SLC9C1Q4G0N8 1177 aa18.7■□□□□ 0.58
TMEM53-203ENST00000372242 MAMDC4Q6UXC1 1216 aa18.7■□□□□ 0.58
TMEM53-203ENST00000372242 ARMCX2Q7L311 632 aa18.7■□□□□ 0.58
TMEM53-203ENST00000372242 DAGLBQ8NCG7 672 aa18.7■□□□□ 0.58
TMEM53-203ENST00000372242 SLAIN1Q8ND83 568 aa18.7■□□□□ 0.58
TMEM53-203ENST00000372242 ZFP91Q96JP5 570 aaPredicted RBP18.7■□□□□ 0.58
TMEM53-203ENST00000372242 MCOLN1Q9GZU1 580 aa18.7■□□□□ 0.58
TMEM53-203ENST00000372242 ASB14A6NK59 587 aa18.69■□□□□ 0.58
TMEM53-203ENST00000372242 M0R2N6 131 aa18.69■□□□□ 0.58
TMEM53-203ENST00000372242 SNAI1O95863 264 aaPredicted RBP18.69■□□□□ 0.58
TMEM53-203ENST00000372242 PRAMEF19Q5SWL8 479 aa18.69■□□□□ 0.58
TMEM53-203ENST00000372242 COL13A1Q5TAT6 717 aaPredicted RBP18.69■□□□□ 0.58
TMEM53-203ENST00000372242 GALNT17Q6IS24 598 aa18.69■□□□□ 0.58
TMEM53-203ENST00000372242 EEPD1Q7L9B9 569 aa18.69■□□□□ 0.58
TMEM53-203ENST00000372242 TRMT44Q8IYL2 757 aaKnown RBP18.69■□□□□ 0.58
TMEM53-203ENST00000372242 PDCD2LQ9BRP1 358 aa18.69■□□□□ 0.58
TMEM53-203ENST00000372242 ANO3Q9BYT9 981 aa18.69■□□□□ 0.58
TMEM53-203ENST00000372242 RPTORQ8N122 1335 aa18.68■□□□□ 0.58
TMEM53-203ENST00000372242 BTBD18B2RXH4 712 aa18.68■□□□□ 0.58
TMEM53-203ENST00000372242 HMGCRP04035 888 aa18.68■□□□□ 0.58
TMEM53-203ENST00000372242 NR3C2P08235 984 aa18.68■□□□□ 0.58
TMEM53-203ENST00000372242 NR5A1Q13285 461 aa18.68■□□□□ 0.58
TMEM53-203ENST00000372242 PGM5Q15124 567 aa18.68■□□□□ 0.58
TMEM53-203ENST00000372242 LARP1BQ659C4 914 aaKnown RBP18.68■□□□□ 0.58
TMEM53-203ENST00000372242 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.68■□□□□ 0.58
TMEM53-203ENST00000372242 SYNGAP1Q96PV0 1343 aa18.68■□□□□ 0.58
TMEM53-203ENST00000372242 FOSP01100 380 aaPredicted RBP18.67■□□□□ 0.58
TMEM53-203ENST00000372242 MYCP01106 439 aaPredicted RBP18.67■□□□□ 0.58
TMEM53-203ENST00000372242 INHAP05111 366 aa18.67■□□□□ 0.58
TMEM53-203ENST00000372242 MYCLP12524 364 aaPredicted RBP18.67■□□□□ 0.58
TMEM53-203ENST00000372242 EDNRBP24530 442 aa18.67■□□□□ 0.58
TMEM53-203ENST00000372242 KRT2P35908 639 aa18.67■□□□□ 0.58
TMEM53-203ENST00000372242 CACNB2Q08289 660 aaPredicted RBP18.67■□□□□ 0.58
TMEM53-203ENST00000372242 PDE4DQ08499 809 aa18.67■□□□□ 0.58
TMEM53-203ENST00000372242 AP3B2Q13367 1082 aa18.67■□□□□ 0.58
TMEM53-203ENST00000372242 MFSD14CQ5VZR4 134 aa18.67■□□□□ 0.58
TMEM53-203ENST00000372242 DIS3L2Q8IYB7 885 aaKnown RBP18.67■□□□□ 0.58
TMEM53-203ENST00000372242 PRKAR2AP13861 404 aaKnown RBP18.67■□□□□ 0.58
TMEM53-203ENST00000372242 TEX2Q8IWB9 1127 aa18.67■□□□□ 0.58
TMEM53-203ENST00000372242 MSL3Q8N5Y2 521 aaKnown RBP18.67■□□□□ 0.58
TMEM53-203ENST00000372242 IWS1Q96ST2 819 aa18.67■□□□□ 0.58
TMEM53-203ENST00000372242 FRMPD4Q14CM0 1322 aa18.66■□□□□ 0.58
TMEM53-203ENST00000372242 ANP32AP39687 249 aaKnown RBP18.66■□□□□ 0.58
TMEM53-203ENST00000372242 EARS2Q5JPH6 523 aaKnown RBP18.66■□□□□ 0.58
TMEM53-203ENST00000372242 MORC4Q8TE76 937 aa18.66■□□□□ 0.58
TMEM53-203ENST00000372242 BRMS1Q9HCU9 246 aa18.66■□□□□ 0.58
TMEM53-203ENST00000372242 RBM19Q9Y4C8 960 aaKnown RBP18.66■□□□□ 0.58
TMEM53-203ENST00000372242 LRRC37A2A6NM11 1700 aa18.66■□□□□ 0.58
TMEM53-203ENST00000372242 H3BQV1 296 aa18.65■□□□□ 0.58
TMEM53-203ENST00000372242 SAFBQ15424 915 aaKnown RBP eCLIP18.65■□□□□ 0.58
TMEM53-203ENST00000372242 STXBP2Q15833 593 aa18.65■□□□□ 0.58
TMEM53-203ENST00000372242 IFFO2Q5TF58 517 aa18.65■□□□□ 0.58
TMEM53-203ENST00000372242 VSIG10LQ86VR7 867 aa18.65■□□□□ 0.58
TMEM53-203ENST00000372242 FBXO16Q8IX29 292 aaPredicted RBP18.65■□□□□ 0.58
TMEM53-203ENST00000372242 TRPV1Q8NER1 839 aa18.65■□□□□ 0.58
TMEM53-203ENST00000372242 MPHOSPH6Q99547 160 aaKnown RBP18.65■□□□□ 0.58
TMEM53-203ENST00000372242 RTEL1Q9NZ71 1219 aa18.65■□□□□ 0.58
TMEM53-203ENST00000372242 CNPY2Q9Y2B0 182 aa18.65■□□□□ 0.58
TMEM53-203ENST00000372242 LOC102724159A0A0B4J2E5 919 aa18.65■□□□□ 0.58
TMEM53-203ENST00000372242 FAM205CA6NFA0 338 aa18.65■□□□□ 0.58
TMEM53-203ENST00000372242 B4DLN1 442 aa18.65■□□□□ 0.58
TMEM53-203ENST00000372242 CCND2P30279 289 aa18.65■□□□□ 0.58
TMEM53-203ENST00000372242 MRPS9P82933 396 aaKnown RBP18.65■□□□□ 0.58
TMEM53-203ENST00000372242 PWP2Q15269 919 aaKnown RBP18.65■□□□□ 0.58
TMEM53-203ENST00000372242 PIK3AP1Q6ZUJ8 805 aa18.65■□□□□ 0.58
TMEM53-203ENST00000372242 TNFRSF25Q93038 417 aa18.65■□□□□ 0.58
TMEM53-203ENST00000372242 KATNBL1Q9H079 304 aa18.65■□□□□ 0.58
TMEM53-203ENST00000372242 ABHD16BQ9H3Z7 469 aa18.65■□□□□ 0.58
TMEM53-203ENST00000372242 EHMT1Q9H9B1 1298 aa18.65■□□□□ 0.58
TMEM53-203ENST00000372242 ZHX1Q9UKY1 873 aaPredicted RBP18.65■□□□□ 0.58
TMEM53-203ENST00000372242 CCDC194A0A1B0GVG4 234 aa18.64■□□□□ 0.57
TMEM53-203ENST00000372242 CYBAP13498 195 aa18.64■□□□□ 0.57
TMEM53-203ENST00000372242 SYT1P21579 422 aa18.64■□□□□ 0.57
TMEM53-203ENST00000372242 SREBF1P36956 1147 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms