RNA–Protein interactions for RNA: ENST00000370275.8

ARFGAP1-202, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ARFGAP1, Length 3,467 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-202ENST00000370275 GNPATO15228 680 aa16.15■□□□□ 0.18
ARFGAP1-202ENST00000370275 CKAP4Q07065 602 aaKnown RBP16.15■□□□□ 0.18
ARFGAP1-202ENST00000370275 GRB10Q13322 594 aa16.15■□□□□ 0.18
ARFGAP1-202ENST00000370275 CCNI2Q6ZMN8 369 aaPredicted RBP16.15■□□□□ 0.18
ARFGAP1-202ENST00000370275 KCNK18Q7Z418 384 aa16.15■□□□□ 0.18
ARFGAP1-202ENST00000370275 CREG2Q8IUH2 290 aa16.15■□□□□ 0.18
ARFGAP1-202ENST00000370275 ANKRD2Q9GZV1 360 aa16.15■□□□□ 0.18
ARFGAP1-202ENST00000370275 ZMYND12Q9H0C1 365 aa16.15■□□□□ 0.18
ARFGAP1-202ENST00000370275 CASZ1Q86V15 1759 aa16.15■□□□□ 0.18
ARFGAP1-202ENST00000370275 AGPSO00116 658 aa16.15■□□□□ 0.18
ARFGAP1-202ENST00000370275 PRPF6O94906 941 aaKnown RBP16.15■□□□□ 0.18
ARFGAP1-202ENST00000370275 NAP1L1P55209 391 aaKnown RBP16.15■□□□□ 0.18
ARFGAP1-202ENST00000370275 PPARDQ03181 441 aa16.15■□□□□ 0.18
ARFGAP1-202ENST00000370275 GFPT1Q06210 699 aaPredicted RBP16.15■□□□□ 0.18
ARFGAP1-202ENST00000370275 SOGA3Q5TF21 947 aa16.15■□□□□ 0.18
ARFGAP1-202ENST00000370275 TMED8Q6PL24 325 aaPredicted RBP16.15■□□□□ 0.18
ARFGAP1-202ENST00000370275 AMOTL1Q8IY63 956 aa16.15■□□□□ 0.18
ARFGAP1-202ENST00000370275 CEP95Q96GE4 821 aa16.15■□□□□ 0.18
ARFGAP1-202ENST00000370275 MS4A14Q96JA4 679 aa16.15■□□□□ 0.18
ARFGAP1-202ENST00000370275 C7orf25Q9BPX7 421 aa16.15■□□□□ 0.18
ARFGAP1-202ENST00000370275 NUP58Q9BVL2 599 aa16.15■□□□□ 0.18
ARFGAP1-202ENST00000370275 NDST4Q9H3R1 872 aa16.15■□□□□ 0.18
ARFGAP1-202ENST00000370275 MED4Q9NPJ6 270 aa16.15■□□□□ 0.18
ARFGAP1-202ENST00000370275 BLOC1S4Q9NUP1 217 aa16.15■□□□□ 0.18
ARFGAP1-202ENST00000370275 CDK8P49336 464 aa16.14■□□□□ 0.17
ARFGAP1-202ENST00000370275 DAGLBQ8NCG7 672 aa16.14■□□□□ 0.17
ARFGAP1-202ENST00000370275 EHBP1Q8NDI1 1231 aa16.14■□□□□ 0.17
ARFGAP1-202ENST00000370275 CALML4Q96GE6 196 aa16.14■□□□□ 0.17
ARFGAP1-202ENST00000370275 COL14A1Q05707 1796 aaKnown RBP16.14■□□□□ 0.17
ARFGAP1-202ENST00000370275 MYH1P12882 1939 aa16.14■□□□□ 0.17
ARFGAP1-202ENST00000370275 SSBP05455 408 aaKnown RBP eCLIP16.14■□□□□ 0.171e-10■■■■■ 35.6
ARFGAP1-202ENST00000370275 RNASE9P60153 205 aaKnown RBP16.14■□□□□ 0.17
ARFGAP1-202ENST00000370275 FAM98CQ17RN3 349 aaKnown RBP16.14■□□□□ 0.17
ARFGAP1-202ENST00000370275 VWA3BQ502W6 1294 aa16.14■□□□□ 0.17
ARFGAP1-202ENST00000370275 CCDC170Q8IYT3 715 aa16.14■□□□□ 0.17
ARFGAP1-202ENST00000370275 NOC3LQ8WTT2 800 aaKnown RBP16.14■□□□□ 0.17
ARFGAP1-202ENST00000370275 SMARCC1Q92922 1105 aaPredicted RBP16.14■□□□□ 0.17
ARFGAP1-202ENST00000370275 RASSF4Q9H2L5 321 aa16.14■□□□□ 0.17
ARFGAP1-202ENST00000370275 C6orf50Q9HD87 102 aa16.14■□□□□ 0.17
ARFGAP1-202ENST00000370275 SNX12Q9UMY4 172 aa16.14■□□□□ 0.17
ARFGAP1-202ENST00000370275 BTDP43251 543 aa16.14■□□□□ 0.17
ARFGAP1-202ENST00000370275 CACNB1Q02641 598 aaPredicted RBP16.14■□□□□ 0.17
ARFGAP1-202ENST00000370275 RASSF7Q02833 373 aa16.14■□□□□ 0.17
ARFGAP1-202ENST00000370275 ARID5AQ03989 594 aa16.14■□□□□ 0.17
ARFGAP1-202ENST00000370275 MAP9Q49MG5 647 aa16.14■□□□□ 0.17
ARFGAP1-202ENST00000370275 SV2BQ7L1I2 683 aa16.14■□□□□ 0.17
ARFGAP1-202ENST00000370275 KRT25Q7Z3Z0 450 aa16.14■□□□□ 0.17
ARFGAP1-202ENST00000370275 FAM114A1Q8IWE2 563 aa16.14■□□□□ 0.17
ARFGAP1-202ENST00000370275 LRRC47Q8N1G4 583 aaKnown RBP16.14■□□□□ 0.17
ARFGAP1-202ENST00000370275 CDK5RAP3Q96JB5 506 aa16.14■□□□□ 0.17
ARFGAP1-202ENST00000370275 PNMA5Q96PV4 448 aa16.14■□□□□ 0.17
ARFGAP1-202ENST00000370275 SEC63Q9UGP8 760 aaKnown RBP16.14■□□□□ 0.17
ARFGAP1-202ENST00000370275 TM4SF1P30408 202 aa16.13■□□□□ 0.17
ARFGAP1-202ENST00000370275 PRPHP41219 470 aa16.13■□□□□ 0.17
ARFGAP1-202ENST00000370275 SPTY2D1Q68D10 685 aaPredicted RBP16.13■□□□□ 0.17
ARFGAP1-202ENST00000370275 ERGIC2Q96RQ1 377 aa16.13■□□□□ 0.17
ARFGAP1-202ENST00000370275 SIK3Q9Y2K2 1263 aa16.13■□□□□ 0.17
ARFGAP1-202ENST00000370275 STRCQ7RTU9 1775 aa16.13■□□□□ 0.17
ARFGAP1-202ENST00000370275 TDRD12Q587J7 1177 aaKnown RBP16.13■□□□□ 0.17
ARFGAP1-202ENST00000370275 SLC10A5Q5PT55 438 aa16.13■□□□□ 0.17
ARFGAP1-202ENST00000370275 CNNM4Q6P4Q7 775 aa16.13■□□□□ 0.17
ARFGAP1-202ENST00000370275 REXO1Q8N1G1 1221 aaKnown RBP16.13■□□□□ 0.17
ARFGAP1-202ENST00000370275 PURBQ96QR8 312 aaKnown RBP16.13■□□□□ 0.17
ARFGAP1-202ENST00000370275 SH2D4AQ9H788 454 aa16.13■□□□□ 0.17
ARFGAP1-202ENST00000370275 CALCRLQ16602 461 aa16.13■□□□□ 0.17
ARFGAP1-202ENST00000370275 UBE2SQ16763 222 aa16.13■□□□□ 0.17
ARFGAP1-202ENST00000370275 PTPROQ16827 1216 aa16.13■□□□□ 0.17
ARFGAP1-202ENST00000370275 GPCPD1Q9NPB8 672 aa16.13■□□□□ 0.17
ARFGAP1-202ENST00000370275 COL22A1Q8NFW1 1626 aaPredicted RBP16.12■□□□□ 0.17
ARFGAP1-202ENST00000370275 FAM170AA1A519 330 aa16.12■□□□□ 0.17
ARFGAP1-202ENST00000370275 TACC1O75410 805 aa16.12■□□□□ 0.17
ARFGAP1-202ENST00000370275 MYL1P05976 194 aa16.12■□□□□ 0.17
ARFGAP1-202ENST00000370275 SLURP2P0DP57 97 aa16.12■□□□□ 0.17
ARFGAP1-202ENST00000370275 SLC1A4P43007 532 aa16.12■□□□□ 0.17
ARFGAP1-202ENST00000370275 ZSCAN29Q8IWY8 852 aaPredicted RBP16.12■□□□□ 0.17
ARFGAP1-202ENST00000370275 TEX11Q8IYF3 940 aa16.12■□□□□ 0.17
ARFGAP1-202ENST00000370275 ANKS1AQ92625 1134 aa16.12■□□□□ 0.17
ARFGAP1-202ENST00000370275 FGFBP2Q9BYJ0 223 aa16.12■□□□□ 0.17
ARFGAP1-202ENST00000370275 COL16A1Q07092 1604 aaPredicted RBP16.12■□□□□ 0.17
ARFGAP1-202ENST00000370275 LAD1O00515 517 aa16.12■□□□□ 0.17
ARFGAP1-202ENST00000370275 USO1O60763 962 aaKnown RBP16.12■□□□□ 0.17
ARFGAP1-202ENST00000370275 BAG3O95817 575 aa16.12■□□□□ 0.17
ARFGAP1-202ENST00000370275 TUBBP07437 444 aa16.12■□□□□ 0.17
ARFGAP1-202ENST00000370275 TNNI2P48788 182 aa16.12■□□□□ 0.17
ARFGAP1-202ENST00000370275 RETREG2Q8NC44 543 aa16.12■□□□□ 0.17
ARFGAP1-202ENST00000370275 SPATA4Q8NEY3 305 aa16.12■□□□□ 0.17
ARFGAP1-202ENST00000370275 MTMR8Q96EF0 704 aa16.12■□□□□ 0.17
ARFGAP1-202ENST00000370275 OSBPL9Q96SU4 736 aa16.12■□□□□ 0.17
ARFGAP1-202ENST00000370275 PLAGL2Q9UPG8 496 aa16.12■□□□□ 0.17
ARFGAP1-202ENST00000370275 CCDC88AQ3V6T2 1871 aa16.12■□□□□ 0.17
ARFGAP1-202ENST00000370275 ROBO1Q9Y6N7 1651 aa16.11■□□□□ 0.17
ARFGAP1-202ENST00000370275 ESYT3A0FGR9 886 aa16.11■□□□□ 0.17
ARFGAP1-202ENST00000370275 GOLGA6BA6NDN3 693 aa16.11■□□□□ 0.17
ARFGAP1-202ENST00000370275 ZSCAN5CA6NGD5 496 aaPredicted RBP16.11■□□□□ 0.17
ARFGAP1-202ENST00000370275 MAGEA1P43355 309 aa16.11■□□□□ 0.17
ARFGAP1-202ENST00000370275 AARSP49588 968 aaKnown RBP eCLIP16.11■□□□□ 0.17
ARFGAP1-202ENST00000370275 ECM1Q16610 540 aa16.11■□□□□ 0.17
ARFGAP1-202ENST00000370275 CENPPQ6IPU0 288 aa16.11■□□□□ 0.17
ARFGAP1-202ENST00000370275 DNAAF5Q86Y56 855 aa16.11■□□□□ 0.17
ARFGAP1-202ENST00000370275 SNX29Q8TEQ0 813 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms