RNA–Protein interactions for RNA: ENST00000369653.8

UBL4A-201, Transcript of ubiquitin like 4A, humanhuman

TSL 3 BASIC

Gene UBL4A, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4A-201ENST00000369653 TRERF1Q96PN7 1200 aa16.54■□□□□ 0.24
UBL4A-201ENST00000369653 LZTS2Q9BRK4 669 aa16.54■□□□□ 0.24
UBL4A-201ENST00000369653 PPP1R12CQ9BZL4 782 aa16.54■□□□□ 0.24
UBL4A-201ENST00000369653 JMJD4Q9H9V9 463 aa16.54■□□□□ 0.24
UBL4A-201ENST00000369653 PRDM6Q9NQX0 595 aa16.54■□□□□ 0.24
UBL4A-201ENST00000369653 TBX21Q9UL17 535 aa16.54■□□□□ 0.24
UBL4A-201ENST00000369653 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.53■□□□□ 0.24
UBL4A-201ENST00000369653 DCDC2CA8MYV0 355 aa16.53■□□□□ 0.24
UBL4A-201ENST00000369653 ASGR1P07306 291 aa16.53■□□□□ 0.24
UBL4A-201ENST00000369653 ACRP10323 421 aa16.53■□□□□ 0.24
UBL4A-201ENST00000369653 RXRAP19793 462 aa16.53■□□□□ 0.24
UBL4A-201ENST00000369653 PBX2P40425 430 aa16.53■□□□□ 0.24
UBL4A-201ENST00000369653 BEX3Q00994 111 aa16.53■□□□□ 0.24
UBL4A-201ENST00000369653 QRICH1Q2TAL8 776 aa16.53■□□□□ 0.24
UBL4A-201ENST00000369653 MAMDC4Q6UXC1 1216 aa16.53■□□□□ 0.24
UBL4A-201ENST00000369653 ARMCX2Q7L311 632 aa16.53■□□□□ 0.24
UBL4A-201ENST00000369653 CCDC144CPQ8IYA2 1237 aa16.53■□□□□ 0.24
UBL4A-201ENST00000369653 BRF1Q92994 677 aa16.53■□□□□ 0.24
UBL4A-201ENST00000369653 TSEN34Q9BSV6 310 aaKnown RBP16.53■□□□□ 0.24
UBL4A-201ENST00000369653 SPZ1Q9BXG8 430 aa16.53■□□□□ 0.24
UBL4A-201ENST00000369653 UPF3BQ9BZI7 483 aaKnown RBP16.53■□□□□ 0.24
UBL4A-201ENST00000369653 VAT1LQ9HCJ6 419 aa16.53■□□□□ 0.24
UBL4A-201ENST00000369653 RBM28Q9NW13 759 aaKnown RBP16.53■□□□□ 0.24
UBL4A-201ENST00000369653 GOLGA8BA8MQT2 603 aa16.52■□□□□ 0.24
UBL4A-201ENST00000369653 ZBTB5O15062 677 aa16.52■□□□□ 0.24
UBL4A-201ENST00000369653 DUSP11O75319 330 aaKnown RBP16.52■□□□□ 0.24
UBL4A-201ENST00000369653 USH1GQ495M9 461 aa16.52■□□□□ 0.24
UBL4A-201ENST00000369653 C16orf59Q7L2K0 433 aa16.52■□□□□ 0.24
UBL4A-201ENST00000369653 FBXO11Q86XK2 927 aa16.52■□□□□ 0.24
UBL4A-201ENST00000369653 HOMER1Q86YM7 354 aa16.52■□□□□ 0.24
UBL4A-201ENST00000369653 RAB11FIP4Q86YS3 637 aa16.52■□□□□ 0.24
UBL4A-201ENST00000369653 VTI1AQ96AJ9 217 aa16.52■□□□□ 0.24
UBL4A-201ENST00000369653 AGXT2Q9BYV1 514 aa16.52■□□□□ 0.24
UBL4A-201ENST00000369653 RIOX1Q9H6W3 641 aa16.52■□□□□ 0.24
UBL4A-201ENST00000369653 UPF2Q9HAU5 1272 aaKnown RBP16.52■□□□□ 0.24
UBL4A-201ENST00000369653 BRPF3Q9ULD4 1205 aa16.52■□□□□ 0.24
UBL4A-201ENST00000369653 NAP1L2Q9ULW6 460 aaPredicted RBP16.52■□□□□ 0.24
UBL4A-201ENST00000369653 ASTN1O14525 1302 aa16.51■□□□□ 0.23
UBL4A-201ENST00000369653 ABCB11O95342 1321 aa16.51■□□□□ 0.23
UBL4A-201ENST00000369653 TRANK1O15050 2925 aa16.51■□□□□ 0.23
UBL4A-201ENST00000369653 MOXD2PA6NHM9 499 aa16.51■□□□□ 0.23
UBL4A-201ENST00000369653 GOLGA8AA7E2F4 631 aa16.51■□□□□ 0.23
UBL4A-201ENST00000369653 CTAGE5O15320 804 aa16.51■□□□□ 0.23
UBL4A-201ENST00000369653 TIMP1P01033 207 aa16.51■□□□□ 0.23
UBL4A-201ENST00000369653 CSF2RAP15509 400 aa16.51■□□□□ 0.23
UBL4A-201ENST00000369653 SMARCA1P28370 1054 aa16.51■□□□□ 0.23
UBL4A-201ENST00000369653 APOBRQ0VD83 1088 aa16.51■□□□□ 0.23
UBL4A-201ENST00000369653 TRAF1Q13077 416 aa16.51■□□□□ 0.23
UBL4A-201ENST00000369653 RTN1Q16799 776 aa16.51■□□□□ 0.23
UBL4A-201ENST00000369653 TMTC3Q6ZXV5 915 aa16.51■□□□□ 0.23
UBL4A-201ENST00000369653 FANCBQ8NB91 859 aa16.51■□□□□ 0.23
UBL4A-201ENST00000369653 MTMR8Q96EF0 704 aa16.51■□□□□ 0.23
UBL4A-201ENST00000369653 IL17RAQ96F46 866 aa16.51■□□□□ 0.23
UBL4A-201ENST00000369653 AMNQ9BXJ7 453 aa16.51■□□□□ 0.23
UBL4A-201ENST00000369653 KATNBL1Q9H079 304 aa16.51■□□□□ 0.23
UBL4A-201ENST00000369653 A1CFQ9NQ94 594 aaKnown RBP16.51■□□□□ 0.23
UBL4A-201ENST00000369653 TRIP12Q14669 1992 aaPredicted RBP16.51■□□□□ 0.23
UBL4A-201ENST00000369653 UMODL1Q5DID0 1318 aa16.5■□□□□ 0.23
UBL4A-201ENST00000369653 CYTH3O43739 400 aa16.5■□□□□ 0.23
UBL4A-201ENST00000369653 PLEKHA8P1O95397 391 aa16.5■□□□□ 0.23
UBL4A-201ENST00000369653 CST5P28325 142 aaPredicted RBP16.5■□□□□ 0.23
UBL4A-201ENST00000369653 CYP2C18P33260 490 aa16.5■□□□□ 0.23
UBL4A-201ENST00000369653 METAP2P50579 478 aaKnown RBP eCLIP16.5■□□□□ 0.231e-8■■□□□ 11.5
UBL4A-201ENST00000369653 PPP2R5BQ15173 497 aa16.5■□□□□ 0.23
UBL4A-201ENST00000369653 MUM1L1Q5H9M0 696 aa16.5■□□□□ 0.23
UBL4A-201ENST00000369653 GNASQ5JWF2 1037 aa16.5■□□□□ 0.23
UBL4A-201ENST00000369653 TMEM240Q5SV17 173 aa16.5■□□□□ 0.23
UBL4A-201ENST00000369653 TMEM63BQ5T3F8 832 aa16.5■□□□□ 0.23
UBL4A-201ENST00000369653 MSL3Q8N5Y2 521 aaKnown RBP16.5■□□□□ 0.23
UBL4A-201ENST00000369653 TET1Q8NFU7 2136 aa16.5■□□□□ 0.23
UBL4A-201ENST00000369653 PPM1EQ8WY54 764 aa16.5■□□□□ 0.23
UBL4A-201ENST00000369653 TIFAQ96CG3 184 aa16.5■□□□□ 0.23
UBL4A-201ENST00000369653 RRP36Q96EU6 259 aaKnown RBP16.5■□□□□ 0.23
UBL4A-201ENST00000369653 GLT1D1Q96MS3 346 aa16.5■□□□□ 0.23
UBL4A-201ENST00000369653 TOX2Q96NM4 488 aa16.5■□□□□ 0.23
UBL4A-201ENST00000369653 PIGSQ96S52 555 aa16.5■□□□□ 0.23
UBL4A-201ENST00000369653 UPF3AQ9H1J1 476 aaKnown RBP16.5■□□□□ 0.23
UBL4A-201ENST00000369653 PDRG1Q9NUG6 133 aa16.5■□□□□ 0.23
UBL4A-201ENST00000369653 SEC63Q9UGP8 760 aaKnown RBP16.5■□□□□ 0.23
UBL4A-201ENST00000369653 BDP1A6H8Y1 2624 aa16.5■□□□□ 0.23
UBL4A-201ENST00000369653 NID2Q14112 1375 aa16.5■□□□□ 0.23
UBL4A-201ENST00000369653 PRRC2BQ5JSZ5 2229 aaKnown RBP16.49■□□□□ 0.23
UBL4A-201ENST00000369653 PNMA6FA0A0J9YX94 578 aa16.49■□□□□ 0.23
UBL4A-201ENST00000369653 A0A0U1RQG5 324 aaPredicted RBP16.49■□□□□ 0.23
UBL4A-201ENST00000369653 CCDC196A0A1B0GTZ2 297 aa16.49■□□□□ 0.23
UBL4A-201ENST00000369653 NFIBO00712 420 aa16.49■□□□□ 0.23
UBL4A-201ENST00000369653 CDK7P50613 346 aa16.49■□□□□ 0.23
UBL4A-201ENST00000369653 GJA9P57773 515 aa16.49■□□□□ 0.23
UBL4A-201ENST00000369653 SLC35G1Q2M3R5 365 aa16.49■□□□□ 0.23
UBL4A-201ENST00000369653 MFSD5Q6N075 450 aa16.49■□□□□ 0.23
UBL4A-201ENST00000369653 NSMFQ6X4W1 530 aa16.49■□□□□ 0.23
UBL4A-201ENST00000369653 ZNF467Q7Z7K2 595 aaPredicted RBP16.49■□□□□ 0.23
UBL4A-201ENST00000369653 PBX4Q9BYU1 374 aa16.49■□□□□ 0.23
UBL4A-201ENST00000369653 ABHD16BQ9H3Z7 469 aa16.49■□□□□ 0.23
UBL4A-201ENST00000369653 ZNF576Q9H609 170 aa16.49■□□□□ 0.23
UBL4A-201ENST00000369653 CYP39A1Q9NYL5 469 aa16.49■□□□□ 0.23
UBL4A-201ENST00000369653 MRPL11Q9Y3B7 192 aaKnown RBP16.49■□□□□ 0.23
UBL4A-201ENST00000369653 XIRP2A4UGR9 3374 aa16.49■□□□□ 0.23
UBL4A-201ENST00000369653 MYH6P13533 1939 aa16.49■□□□□ 0.23
UBL4A-201ENST00000369653 TMEM265A0A087WTH1 108 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms