RNA–Protein interactions for RNA: ENST00000369407.3

PHGDH-201, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 3,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-201ENST00000369407 CCNE1P24864 410 aa13.62□□□□□ -0.23
PHGDH-201ENST00000369407 RCAN1P53805 252 aa13.62□□□□□ -0.23
PHGDH-201ENST00000369407 PFKFB3Q16875 520 aaPredicted RBP13.62□□□□□ -0.23
PHGDH-201ENST00000369407 ZNF662Q6ZS27 426 aa13.62□□□□□ -0.23
PHGDH-201ENST00000369407 PIK3R5Q8WYR1 880 aa13.62□□□□□ -0.23
PHGDH-201ENST00000369407 CCT8L2Q96SF2 557 aa13.62□□□□□ -0.23
PHGDH-201ENST00000369407 SEMA6BQ9H3T3 888 aa13.62□□□□□ -0.23
PHGDH-201ENST00000369407 TCP1P17987 556 aaKnown RBP13.61□□□□□ -0.23
PHGDH-201ENST00000369407 ATF3P18847 181 aa13.61□□□□□ -0.23
PHGDH-201ENST00000369407 GSCP56915 257 aaPredicted RBP13.61□□□□□ -0.23
PHGDH-201ENST00000369407 SF3B2Q13435 895 aaKnown RBP13.61□□□□□ -0.23
PHGDH-201ENST00000369407 TXNRD1Q16881 649 aa13.61□□□□□ -0.23
PHGDH-201ENST00000369407 SPRED3Q2MJR0 410 aa13.61□□□□□ -0.23
PHGDH-201ENST00000369407 CEP85LQ5SZL2 805 aa13.61□□□□□ -0.23
PHGDH-201ENST00000369407 KLHDC7AQ5VTJ3 777 aa13.61□□□□□ -0.23
PHGDH-201ENST00000369407 DYMQ7RTS9 669 aa13.61□□□□□ -0.23
PHGDH-201ENST00000369407 CASKIN2Q8WXE0 1202 aa13.61□□□□□ -0.23
PHGDH-201ENST00000369407 TANGO6Q9C0B7 1094 aa13.61□□□□□ -0.23
PHGDH-201ENST00000369407 GOLPH3Q9H4A6 298 aa13.61□□□□□ -0.23
PHGDH-201ENST00000369407 SETQ01105 290 aaPredicted RBP13.61□□□□□ -0.23
PHGDH-201ENST00000369407 SATB1Q01826 763 aa13.61□□□□□ -0.23
PHGDH-201ENST00000369407 HEATR3Q7Z4Q2 680 aa13.61□□□□□ -0.23
PHGDH-201ENST00000369407 NLRP14Q86W24 1093 aa13.61□□□□□ -0.23
PHGDH-201ENST00000369407 SLC4A9Q96Q91 983 aa13.61□□□□□ -0.23
PHGDH-201ENST00000369407 EPN3Q9H201 632 aa13.61□□□□□ -0.23
PHGDH-201ENST00000369407 KBTBD4Q9NVX7 518 aa13.61□□□□□ -0.23
PHGDH-201ENST00000369407 PLAGL2Q9UPG8 496 aa13.61□□□□□ -0.23
PHGDH-201ENST00000369407 TRPM3Q9HCF6 1732 aaPredicted RBP13.61□□□□□ -0.23
PHGDH-201ENST00000369407 EPB41P11171 864 aaKnown RBP13.61□□□□□ -0.23
PHGDH-201ENST00000369407 IL2RBP14784 551 aa13.61□□□□□ -0.23
PHGDH-201ENST00000369407 PPP2R5BQ15173 497 aa13.61□□□□□ -0.23
PHGDH-201ENST00000369407 LRRC41Q15345 812 aa13.61□□□□□ -0.23
PHGDH-201ENST00000369407 PTGISQ16647 500 aa13.61□□□□□ -0.23
PHGDH-201ENST00000369407 SUSD4Q5VX71 490 aa13.61□□□□□ -0.23
PHGDH-201ENST00000369407 DDX42Q86XP3 938 aaKnown RBP eCLIP13.61□□□□□ -0.233e-6■■■□□ 16.1
PHGDH-201ENST00000369407 IQCKQ8N0W5 287 aa13.61□□□□□ -0.23
PHGDH-201ENST00000369407 PYM1Q9BRP8 204 aaKnown RBP13.61□□□□□ -0.23
PHGDH-201ENST00000369407 RIOK1Q9BRS2 568 aaKnown RBP13.61□□□□□ -0.23
PHGDH-201ENST00000369407 PPP1R37O75864 691 aa13.6□□□□□ -0.23
PHGDH-201ENST00000369407 USP8P40818 1118 aa13.6□□□□□ -0.23
PHGDH-201ENST00000369407 HLTFQ14527 1009 aaKnown RBP eCLIP13.6□□□□□ -0.23
PHGDH-201ENST00000369407 KCNB1Q14721 858 aa13.6□□□□□ -0.23
PHGDH-201ENST00000369407 CABP7Q86V35 215 aa13.6□□□□□ -0.23
PHGDH-201ENST00000369407 DZIP3Q86Y13 1208 aaKnown RBP13.6□□□□□ -0.23
PHGDH-201ENST00000369407 IFT20Q8IY31 132 aa13.6□□□□□ -0.23
PHGDH-201ENST00000369407 KIRREL3Q8IZU9 778 aa13.6□□□□□ -0.23
PHGDH-201ENST00000369407 KIAA0895Q8NCT3 520 aa13.6□□□□□ -0.23
PHGDH-201ENST00000369407 GLIS3Q8NEA6 775 aa13.6□□□□□ -0.23
PHGDH-201ENST00000369407 DHTKD1Q96HY7 919 aaPredicted RBP13.6□□□□□ -0.23
PHGDH-201ENST00000369407 TRIM9Q9C026 710 aa13.6□□□□□ -0.23
PHGDH-201ENST00000369407 TSPY2A6NKD2 308 aa13.6□□□□□ -0.23
PHGDH-201ENST00000369407 PALMO75781 387 aa13.6□□□□□ -0.23
PHGDH-201ENST00000369407 TMOD1P28289 359 aa13.6□□□□□ -0.23
PHGDH-201ENST00000369407 TECP42680 631 aa13.6□□□□□ -0.23
PHGDH-201ENST00000369407 TRAPPC10P48553 1259 aa13.6□□□□□ -0.23
PHGDH-201ENST00000369407 CHRNDQ07001 517 aa13.6□□□□□ -0.23
PHGDH-201ENST00000369407 EHHADHQ08426 723 aa13.6□□□□□ -0.23
PHGDH-201ENST00000369407 LETM2Q2VYF4 491 aa13.6□□□□□ -0.23
PHGDH-201ENST00000369407 ARL6IP4Q66PJ3 421 aaKnown RBP13.6□□□□□ -0.23
PHGDH-201ENST00000369407 RETREG2Q8NC44 543 aa13.6□□□□□ -0.23
PHGDH-201ENST00000369407 MYCBPAPQ8TBZ2 947 aa13.6□□□□□ -0.23
PHGDH-201ENST00000369407 CAVIN3Q969G5 261 aa13.6□□□□□ -0.23
PHGDH-201ENST00000369407 NDST4Q9H3R1 872 aa13.6□□□□□ -0.23
PHGDH-201ENST00000369407 PLAAQ9Y263 795 aa13.6□□□□□ -0.23
PHGDH-201ENST00000369407 GOLGA8HP0CJ92 632 aa13.59□□□□□ -0.23
PHGDH-201ENST00000369407 VWA3BQ502W6 1294 aa13.59□□□□□ -0.23
PHGDH-201ENST00000369407 CACNA2D4Q7Z3S7 1137 aa13.59□□□□□ -0.23
PHGDH-201ENST00000369407 CEP57Q86XR8 500 aa13.59□□□□□ -0.23
PHGDH-201ENST00000369407 EGFL6Q8IUX8 553 aa13.59□□□□□ -0.23
PHGDH-201ENST00000369407 CCDC13Q8IYE1 715 aa13.59□□□□□ -0.23
PHGDH-201ENST00000369407 ZNF384Q8TF68 577 aa13.59□□□□□ -0.23
PHGDH-201ENST00000369407 ZKSCAN4Q969J2 545 aaPredicted RBP13.59□□□□□ -0.23
PHGDH-201ENST00000369407 CALM1P0DP23 149 aa13.59□□□□□ -0.23
PHGDH-201ENST00000369407 CALM2P0DP24 149 aa13.59□□□□□ -0.23
PHGDH-201ENST00000369407 CALM3P0DP25 149 aa13.59□□□□□ -0.23
PHGDH-201ENST00000369407 CFAP221Q4G0U5 840 aa13.59□□□□□ -0.23
PHGDH-201ENST00000369407 KDM7AQ6ZMT4 941 aa13.59□□□□□ -0.23
PHGDH-201ENST00000369407 UIMC1Q96RL1 719 aa13.59□□□□□ -0.23
PHGDH-201ENST00000369407 ERGIC2Q96RQ1 377 aa13.59□□□□□ -0.23
PHGDH-201ENST00000369407 PCDHA6Q9UN73 950 aa13.59□□□□□ -0.23
PHGDH-201ENST00000369407 SIK3Q9Y2K2 1263 aa13.59□□□□□ -0.23
PHGDH-201ENST00000369407 PCDHA8Q9Y5H6 950 aa13.59□□□□□ -0.23
PHGDH-201ENST00000369407 DISP2A7MBM2 1401 aa13.59□□□□□ -0.23
PHGDH-201ENST00000369407 DDAH1O94760 285 aa13.59□□□□□ -0.23
PHGDH-201ENST00000369407 PDHBP11177 359 aa13.59□□□□□ -0.23
PHGDH-201ENST00000369407 NOX5Q96PH1 765 aa13.59□□□□□ -0.23
PHGDH-201ENST00000369407 MTA3Q9BTC8 594 aa13.59□□□□□ -0.23
PHGDH-201ENST00000369407 ANAPC4Q9UJX5 808 aa13.59□□□□□ -0.23
PHGDH-201ENST00000369407 PCDHA4Q9UN74 947 aa13.59□□□□□ -0.23
PHGDH-201ENST00000369407 FER1L4A9Z1Z3 1794 aa13.58□□□□□ -0.23
PHGDH-201ENST00000369407 BICDL2A1A5D9 508 aa13.58□□□□□ -0.24
PHGDH-201ENST00000369407 FSBPO95073 299 aa13.58□□□□□ -0.24
PHGDH-201ENST00000369407 MDH1P40925 334 aaKnown RBP13.58□□□□□ -0.24
PHGDH-201ENST00000369407 CHADLQ6NUI6 762 aa13.58□□□□□ -0.24
PHGDH-201ENST00000369407 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.58□□□□□ -0.24
PHGDH-201ENST00000369407 PACSIN1Q9BY11 444 aa13.58□□□□□ -0.24
PHGDH-201ENST00000369407 KLC4Q9NSK0 619 aa13.58□□□□□ -0.24
PHGDH-201ENST00000369407 RAD51CO43502 376 aa13.58□□□□□ -0.24
PHGDH-201ENST00000369407 CCNT1O60563 726 aaKnown RBP13.58□□□□□ -0.24
PHGDH-201ENST00000369407 HSPA2P54652 639 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms