RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 ADD3Q9UEY8 706 aaKnown RBP15.94■□□□□ 0.14
TPM3-211ENST00000368531 DIS3Q9Y2L1 958 aaKnown RBP15.94■□□□□ 0.14
TPM3-211ENST00000368531 SPDYE3A6NKU9 549 aa15.93■□□□□ 0.14
TPM3-211ENST00000368531 PIK3CDO00329 1044 aa15.93■□□□□ 0.14
TPM3-211ENST00000368531 MYCLP12524 364 aaPredicted RBP15.93■□□□□ 0.14
TPM3-211ENST00000368531 GHRHRQ02643 423 aa15.93■□□□□ 0.14
TPM3-211ENST00000368531 BECN1Q14457 450 aa15.93■□□□□ 0.14
TPM3-211ENST00000368531 PKN2Q16513 984 aaKnown RBP15.93■□□□□ 0.14
TPM3-211ENST00000368531 SLC9C1Q4G0N8 1177 aa15.93■□□□□ 0.14
TPM3-211ENST00000368531 PRAMEF19Q5SWL8 479 aa15.93■□□□□ 0.14
TPM3-211ENST00000368531 KRT40Q6A162 431 aa15.93■□□□□ 0.14
TPM3-211ENST00000368531 BLIDQ8IZY5 108 aa15.93■□□□□ 0.14
TPM3-211ENST00000368531 REXO1Q8N1G1 1221 aaKnown RBP15.93■□□□□ 0.14
TPM3-211ENST00000368531 NSUN6Q8TEA1 469 aaKnown RBP15.93■□□□□ 0.14
TPM3-211ENST00000368531 ZFP91Q96JP5 570 aaPredicted RBP15.93■□□□□ 0.14
TPM3-211ENST00000368531 PHF20Q9BVI0 1012 aa15.93■□□□□ 0.14
TPM3-211ENST00000368531 MCOLN1Q9GZU1 580 aa15.93■□□□□ 0.14
TPM3-211ENST00000368531 PCDHA6Q9UN73 950 aa15.93■□□□□ 0.14
TPM3-211ENST00000368531 PCDHA4Q9UN74 947 aa15.93■□□□□ 0.14
TPM3-211ENST00000368531 KIF3AQ9Y496 699 aa15.93■□□□□ 0.14
TPM3-211ENST00000368531 PCDHA8Q9Y5H6 950 aa15.93■□□□□ 0.14
TPM3-211ENST00000368531 COL13A1Q5TAT6 717 aaPredicted RBP15.92■□□□□ 0.14
TPM3-211ENST00000368531 MFSD14CQ5VZR4 134 aa15.92■□□□□ 0.14
TPM3-211ENST00000368531 OLFML2BQ68BL8 750 aa15.92■□□□□ 0.14
TPM3-211ENST00000368531 ARMCX2Q7L311 632 aa15.92■□□□□ 0.14
TPM3-211ENST00000368531 EEPD1Q7L9B9 569 aa15.92■□□□□ 0.14
TPM3-211ENST00000368531 SLAIN1Q8ND83 568 aa15.92■□□□□ 0.14
TPM3-211ENST00000368531 DNERQ8NFT8 737 aa15.92■□□□□ 0.14
TPM3-211ENST00000368531 BICD2Q8TD16 824 aa15.92■□□□□ 0.14
TPM3-211ENST00000368531 PXYLP1Q8TE99 480 aa15.92■□□□□ 0.14
TPM3-211ENST00000368531 TINF2Q9BSI4 451 aa15.92■□□□□ 0.14
TPM3-211ENST00000368531 MAF1Q9H063 256 aa15.92■□□□□ 0.14
TPM3-211ENST00000368531 GLT8D2Q9H1C3 349 aa15.92■□□□□ 0.14
TPM3-211ENST00000368531 PXMP2Q9NR77 195 aa15.92■□□□□ 0.14
TPM3-211ENST00000368531 ASB14A6NK59 587 aa15.91■□□□□ 0.14
TPM3-211ENST00000368531 HMGCRP04035 888 aa15.91■□□□□ 0.14
TPM3-211ENST00000368531 INHAP05111 366 aa15.91■□□□□ 0.14
TPM3-211ENST00000368531 PDE4DQ08499 809 aa15.91■□□□□ 0.14
TPM3-211ENST00000368531 ZNF467Q7Z7K2 595 aaPredicted RBP15.91■□□□□ 0.14
TPM3-211ENST00000368531 TRMT44Q8IYL2 757 aaKnown RBP15.91■□□□□ 0.14
TPM3-211ENST00000368531 IL31RAQ8NI17 732 aa15.91■□□□□ 0.14
TPM3-211ENST00000368531 OXER1Q8TDS5 423 aa15.91■□□□□ 0.14
TPM3-211ENST00000368531 INTS4Q96HW7 963 aaKnown RBP15.91■□□□□ 0.14
TPM3-211ENST00000368531 ANO3Q9BYT9 981 aa15.91■□□□□ 0.14
TPM3-211ENST00000368531 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.91■□□□□ 0.14
TPM3-211ENST00000368531 MYH7BA7E2Y1 1941 aa15.91■□□□□ 0.14
TPM3-211ENST00000368531 B4DLN1 442 aa15.9■□□□□ 0.14
TPM3-211ENST00000368531 SNAI1O95863 264 aaPredicted RBP15.9■□□□□ 0.14
TPM3-211ENST00000368531 MMP1P03956 469 aa15.9■□□□□ 0.14
TPM3-211ENST00000368531 KRT2P35908 639 aa15.9■□□□□ 0.14
TPM3-211ENST00000368531 CLK2P49760 499 aaKnown RBP15.9■□□□□ 0.14
TPM3-211ENST00000368531 PGM5Q15124 567 aa15.9■□□□□ 0.14
TPM3-211ENST00000368531 NPY5RQ15761 445 aa15.9■□□□□ 0.14
TPM3-211ENST00000368531 LARP1BQ659C4 914 aaKnown RBP15.9■□□□□ 0.14
TPM3-211ENST00000368531 GALNT17Q6IS24 598 aa15.9■□□□□ 0.14
TPM3-211ENST00000368531 MAMDC4Q6UXC1 1216 aa15.9■□□□□ 0.14
TPM3-211ENST00000368531 MPHOSPH6Q99547 160 aaKnown RBP15.9■□□□□ 0.14
TPM3-211ENST00000368531 BRMS1Q9HCU9 246 aa15.9■□□□□ 0.14
TPM3-211ENST00000368531 TSHZ2Q9NRE2 1034 aa15.9■□□□□ 0.14
TPM3-211ENST00000368531 LRRC37A2A6NM11 1700 aa15.89■□□□□ 0.13
TPM3-211ENST00000368531 BTBD18B2RXH4 712 aa15.89■□□□□ 0.13
TPM3-211ENST00000368531 H3BQV1 296 aa15.89■□□□□ 0.13
TPM3-211ENST00000368531 FOSP01100 380 aaPredicted RBP15.89■□□□□ 0.13
TPM3-211ENST00000368531 NR3C2P08235 984 aa15.89■□□□□ 0.13
TPM3-211ENST00000368531 PRKAR2AP13861 404 aaKnown RBP15.89■□□□□ 0.13
TPM3-211ENST00000368531 CNGA1P29973 690 aa15.89■□□□□ 0.13
TPM3-211ENST00000368531 ANP32AP39687 249 aaKnown RBP15.89■□□□□ 0.13
TPM3-211ENST00000368531 CACNB2Q08289 660 aaPredicted RBP15.89■□□□□ 0.13
TPM3-211ENST00000368531 NR5A1Q13285 461 aa15.89■□□□□ 0.13
TPM3-211ENST00000368531 AP3B2Q13367 1082 aa15.89■□□□□ 0.13
TPM3-211ENST00000368531 SAFBQ15424 915 aaKnown RBP eCLIP15.89■□□□□ 0.13
TPM3-211ENST00000368531 IFFO2Q5TF58 517 aa15.89■□□□□ 0.13
TPM3-211ENST00000368531 FBXO16Q8IX29 292 aaPredicted RBP15.89■□□□□ 0.13
TPM3-211ENST00000368531 DIS3L2Q8IYB7 885 aaKnown RBP15.89■□□□□ 0.13
TPM3-211ENST00000368531 DAGLBQ8NCG7 672 aa15.89■□□□□ 0.13
TPM3-211ENST00000368531 FBXO18Q8NFZ0 1043 aa15.89■□□□□ 0.13
TPM3-211ENST00000368531 PDCD2LQ9BRP1 358 aa15.89■□□□□ 0.13
TPM3-211ENST00000368531 EHMT1Q9H9B1 1298 aa15.89■□□□□ 0.13
TPM3-211ENST00000368531 RTEL1Q9NZ71 1219 aa15.89■□□□□ 0.13
TPM3-211ENST00000368531 ZHX1Q9UKY1 873 aaPredicted RBP15.89■□□□□ 0.13
TPM3-211ENST00000368531 CNPY2Q9Y2B0 182 aa15.89■□□□□ 0.13
TPM3-211ENST00000368531 KIAA1217Q5T5P2 1943 aa15.88■□□□□ 0.13
TPM3-211ENST00000368531 CCND2P30279 289 aa15.88■□□□□ 0.13
TPM3-211ENST00000368531 CCND3P30281 292 aaPredicted RBP15.88■□□□□ 0.13
TPM3-211ENST00000368531 GNL2Q13823 731 aaKnown RBP15.88■□□□□ 0.13
TPM3-211ENST00000368531 STXBP2Q15833 593 aa15.88■□□□□ 0.13
TPM3-211ENST00000368531 MCTP1Q6DN14 999 aa15.88■□□□□ 0.13
TPM3-211ENST00000368531 SEPT14Q6ZU15 432 aa15.88■□□□□ 0.13
TPM3-211ENST00000368531 FAM177A1Q8N128 213 aaPredicted RBP15.88■□□□□ 0.13
TPM3-211ENST00000368531 MSL3Q8N5Y2 521 aaKnown RBP15.88■□□□□ 0.13
TPM3-211ENST00000368531 TRPV1Q8NER1 839 aa15.88■□□□□ 0.13
TPM3-211ENST00000368531 IWS1Q96ST2 819 aa15.88■□□□□ 0.13
TPM3-211ENST00000368531 RPTORQ8N122 1335 aa15.88■□□□□ 0.13
TPM3-211ENST00000368531 SYNGAP1Q96PV0 1343 aa15.88■□□□□ 0.13
TPM3-211ENST00000368531 CCDC194A0A1B0GVG4 234 aa15.87■□□□□ 0.13
TPM3-211ENST00000368531 M0R2N6 131 aa15.87■□□□□ 0.13
TPM3-211ENST00000368531 ACVR2BQ13705 512 aa15.87■□□□□ 0.13
TPM3-211ENST00000368531 MTFR1Q15390 333 aa15.87■□□□□ 0.13
TPM3-211ENST00000368531 ANO1Q5XXA6 986 aa15.87■□□□□ 0.13
TPM3-211ENST00000368531 PIK3AP1Q6ZUJ8 805 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms