RNA–Protein interactions for RNA: ENST00000367379.5

PTPRC-204, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 5

Gene PTPRC, Length 517 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-204ENST00000367379 BCAS3Q9H6U6 928 aa7.97□□□□□ -1.13
PTPRC-204ENST00000367379 CGGBP1Q9UFW8 167 aaPredicted RBP7.97□□□□□ -1.13
PTPRC-204ENST00000367379 RWDD3Q9Y3V2 267 aa7.97□□□□□ -1.13
PTPRC-204ENST00000367379 RIMBP3CA6NJZ7 1639 aa7.96□□□□□ -1.13
PTPRC-204ENST00000367379 RIMBP3BA6NNM3 1639 aa7.96□□□□□ -1.13
PTPRC-204ENST00000367379 RIMBP3Q9UFD9 1639 aa7.96□□□□□ -1.13
PTPRC-204ENST00000367379 C2orf71A6NGG8 1288 aa7.96□□□□□ -1.14
PTPRC-204ENST00000367379 NOBOXO60393 691 aa7.96□□□□□ -1.14
PTPRC-204ENST00000367379 SLC7A5Q01650 507 aa7.96□□□□□ -1.14
PTPRC-204ENST00000367379 GRB10Q13322 594 aa7.96□□□□□ -1.14
PTPRC-204ENST00000367379 CYB5RLQ6IPT4 315 aa7.96□□□□□ -1.14
PTPRC-204ENST00000367379 ZNF654Q8IZM8 581 aa7.96□□□□□ -1.14
PTPRC-204ENST00000367379 CARFQ8N187 725 aa7.96□□□□□ -1.14
PTPRC-204ENST00000367379 OR6P1Q8NGX9 317 aa7.96□□□□□ -1.14
PTPRC-204ENST00000367379 PEX11GQ96HA9 241 aa7.96□□□□□ -1.14
PTPRC-204ENST00000367379 USP40Q9NVE5 1235 aa7.96□□□□□ -1.14
PTPRC-204ENST00000367379 PCDHB10Q9UN67 800 aa7.96□□□□□ -1.14
PTPRC-204ENST00000367379 BACE2Q9Y5Z0 518 aa7.96□□□□□ -1.14
PTPRC-204ENST00000367379 ARHGEF11O15085 1522 aa7.96□□□□□ -1.14
PTPRC-204ENST00000367379 TDRD9Q8NDG6 1382 aaKnown RBP7.96□□□□□ -1.14
PTPRC-204ENST00000367379 PPM1BO75688 479 aa7.95□□□□□ -1.14
PTPRC-204ENST00000367379 SEPHS1P49903 392 aa7.95□□□□□ -1.14
PTPRC-204ENST00000367379 EIF6P56537 245 aaKnown RBP7.95□□□□□ -1.14
PTPRC-204ENST00000367379 DPY19L1Q2PZI1 675 aa7.95□□□□□ -1.14
PTPRC-204ENST00000367379 UBXN11Q5T124 520 aa7.95□□□□□ -1.14
PTPRC-204ENST00000367379 ZNF513Q8N8E2 541 aaPredicted RBP7.95□□□□□ -1.14
PTPRC-204ENST00000367379 RASGRP4Q8TDF6 673 aa7.95□□□□□ -1.14
PTPRC-204ENST00000367379 FGD4Q96M96 766 aa7.95□□□□□ -1.14
PTPRC-204ENST00000367379 NOX5Q96PH1 765 aa7.95□□□□□ -1.14
PTPRC-204ENST00000367379 SPATA6Q9NWH7 488 aaPredicted RBP7.95□□□□□ -1.14
PTPRC-204ENST00000367379 NUDT5Q9UKK9 219 aa7.95□□□□□ -1.14
PTPRC-204ENST00000367379 EFR3BQ9Y2G0 817 aa7.95□□□□□ -1.14
PTPRC-204ENST00000367379 RAD54L2Q9Y4B4 1467 aa7.94□□□□□ -1.14
PTPRC-204ENST00000367379 ZBTB7AO95365 584 aa7.94□□□□□ -1.14
PTPRC-204ENST00000367379 RECKO95980 971 aa7.94□□□□□ -1.14
PTPRC-204ENST00000367379 AMPD2Q01433 879 aa7.94□□□□□ -1.14
PTPRC-204ENST00000367379 CACNB2Q08289 660 aaPredicted RBP7.94□□□□□ -1.14
PTPRC-204ENST00000367379 HHIPL2Q6UWX4 724 aa7.94□□□□□ -1.14
PTPRC-204ENST00000367379 FERMT3Q86UX7 667 aa7.94□□□□□ -1.14
PTPRC-204ENST00000367379 METTL16Q86W50 562 aaKnown RBP7.94□□□□□ -1.14
PTPRC-204ENST00000367379 CPNE8Q86YQ8 564 aa7.94□□□□□ -1.14
PTPRC-204ENST00000367379 SMARCC2Q8TAQ2 1214 aa7.94□□□□□ -1.14
PTPRC-204ENST00000367379 DUSP10Q9Y6W6 482 aa7.94□□□□□ -1.14
PTPRC-204ENST00000367379 TRBV23OR9-2A0A075B6M9 112 aa7.93□□□□□ -1.14
PTPRC-204ENST00000367379 PAMP19021 973 aa7.93□□□□□ -1.14
PTPRC-204ENST00000367379 VAMP1P23763 118 aa7.93□□□□□ -1.14
PTPRC-204ENST00000367379 WWC2Q6AWC2 1192 aa7.93□□□□□ -1.14
PTPRC-204ENST00000367379 ADAT2Q7Z6V5 191 aaKnown RBP7.93□□□□□ -1.14
PTPRC-204ENST00000367379 LNPKQ9C0E8 428 aa7.93□□□□□ -1.14
PTPRC-204ENST00000367379 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.93□□□□□ -1.14
PTPRC-204ENST00000367379 GULP1Q9UBP9 304 aa7.93□□□□□ -1.14
PTPRC-204ENST00000367379 FGD5Q6ZNL6 1462 aa7.93□□□□□ -1.14
PTPRC-204ENST00000367379 WDR97A6NE52 1622 aa7.92□□□□□ -1.14
PTPRC-204ENST00000367379 CHD1O14646 1710 aa7.92□□□□□ -1.14
PTPRC-204ENST00000367379 SCAMP3O14828 347 aaKnown RBP7.92□□□□□ -1.14
PTPRC-204ENST00000367379 ZXDCQ2QGD7 858 aaPredicted RBP7.92□□□□□ -1.14
PTPRC-204ENST00000367379 LINC00482Q8N8I6 264 aa7.92□□□□□ -1.14
PTPRC-204ENST00000367379 NPHP3-ACAD11A0A0J9YXS1 232 aa7.91□□□□□ -1.14
PTPRC-204ENST00000367379 C7orf72A4D263 438 aa7.91□□□□□ -1.14
PTPRC-204ENST00000367379 K7ESM1 405 aa7.91□□□□□ -1.14
PTPRC-204ENST00000367379 RBM10P98175 930 aaKnown RBP7.91□□□□□ -1.14
PTPRC-204ENST00000367379 ZNF761Q86XN6 746 aaPredicted RBP7.91□□□□□ -1.14
PTPRC-204ENST00000367379 GPRASP2Q96D09 838 aa7.91□□□□□ -1.14
PTPRC-204ENST00000367379 SHDQ96IW2 340 aa7.91□□□□□ -1.14
PTPRC-204ENST00000367379 GRIN2BQ13224 1484 aa7.91□□□□□ -1.14
PTPRC-204ENST00000367379 CUX1P39880 1505 aa7.9□□□□□ -1.14
PTPRC-204ENST00000367379 MAGI1Q96QZ7 1491 aaPredicted RBP7.9□□□□□ -1.14
PTPRC-204ENST00000367379 CNR2P34972 360 aa7.9□□□□□ -1.14
PTPRC-204ENST00000367379 SARSP49591 514 aaKnown RBP7.9□□□□□ -1.14
PTPRC-204ENST00000367379 CASP7P55210 303 aa7.9□□□□□ -1.14
PTPRC-204ENST00000367379 GJA9P57773 515 aa7.9□□□□□ -1.14
PTPRC-204ENST00000367379 PLEKHO2Q8TD55 490 aa7.9□□□□□ -1.14
PTPRC-204ENST00000367379 COPS5Q92905 334 aa7.9□□□□□ -1.14
PTPRC-204ENST00000367379 NTMQ9P121 344 aa7.9□□□□□ -1.14
PTPRC-204ENST00000367379 SNAPC4Q5SXM2 1469 aa7.89□□□□□ -1.15
PTPRC-204ENST00000367379 NPHS1O60500 1241 aa7.89□□□□□ -1.15
PTPRC-204ENST00000367379 GJA8P48165 433 aa7.89□□□□□ -1.15
PTPRC-204ENST00000367379 MBLAC2Q68D91 279 aa7.89□□□□□ -1.15
PTPRC-204ENST00000367379 DDX1Q92499 740 aaKnown RBP7.89□□□□□ -1.15
PTPRC-204ENST00000367379 RBM15Q96T37 977 aaKnown RBP eCLIP7.89□□□□□ -1.15
PTPRC-204ENST00000367379 MMP19Q99542 508 aa7.89□□□□□ -1.15
PTPRC-204ENST00000367379 APEX2Q9UBZ4 518 aa7.89□□□□□ -1.15
PTPRC-204ENST00000367379 ANKRD34BA5PLL1 514 aa7.88□□□□□ -1.15
PTPRC-204ENST00000367379 NTRK1P04629 796 aa7.88□□□□□ -1.15
PTPRC-204ENST00000367379 ITGB3P05106 788 aa7.88□□□□□ -1.15
PTPRC-204ENST00000367379 C8BP07358 591 aa7.88□□□□□ -1.15
PTPRC-204ENST00000367379 TMCO4Q5TGY1 634 aa7.88□□□□□ -1.15
PTPRC-204ENST00000367379 DPF3Q92784 378 aa7.88□□□□□ -1.15
PTPRC-204ENST00000367379 ZBTB8AQ96BR9 441 aa7.88□□□□□ -1.15
PTPRC-204ENST00000367379 DDX11Q96FC9 970 aa7.88□□□□□ -1.15
PTPRC-204ENST00000367379 MYRFQ9Y2G1 1151 aa7.88□□□□□ -1.15
PTPRC-204ENST00000367379 SUGT1Q9Y2Z0 365 aa7.88□□□□□ -1.15
PTPRC-204ENST00000367379 EMC9Q9Y3B6 208 aa7.88□□□□□ -1.15
PTPRC-204ENST00000367379 SIT1Q9Y3P8 196 aa7.88□□□□□ -1.15
PTPRC-204ENST00000367379 SYNJ1O43426 1573 aa7.88□□□□□ -1.15
PTPRC-204ENST00000367379 SYNJ2O15056 1496 aa7.87□□□□□ -1.15
PTPRC-204ENST00000367379 GAPVD1Q14C86 1478 aa7.87□□□□□ -1.15
PTPRC-204ENST00000367379 FUCA1P04066 466 aa7.87□□□□□ -1.15
PTPRC-204ENST00000367379 MAGEA10P43363 369 aaPredicted RBP7.87□□□□□ -1.15
PTPRC-204ENST00000367379 KIAA1211LQ6NV74 962 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms