RNA–Protein interactions for RNA: ENST00000366735.5

MRPL55-209, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL55, Length 1,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-209ENST00000366735 FRMPD2Q68DX3 1309 aaPredicted RBP14.55□□□□□ -0.08
MRPL55-209ENST00000366735 ZBBXA8MT70 800 aa14.54□□□□□ -0.08
MRPL55-209ENST00000366735 GRXCR1A8MXD5 290 aa14.54□□□□□ -0.08
MRPL55-209ENST00000366735 NFIBO00712 420 aa14.54□□□□□ -0.08
MRPL55-209ENST00000366735 PDHBP11177 359 aa14.54□□□□□ -0.08
MRPL55-209ENST00000366735 CALML3P27482 149 aa14.54□□□□□ -0.08
MRPL55-209ENST00000366735 RFC2P35250 354 aa14.54□□□□□ -0.08
MRPL55-209ENST00000366735 SLC16A2P36021 539 aa14.54□□□□□ -0.08
MRPL55-209ENST00000366735 PDE1AP54750 535 aa14.54□□□□□ -0.08
MRPL55-209ENST00000366735 PSMC6P62333 389 aa14.54□□□□□ -0.08
MRPL55-209ENST00000366735 CCDC178Q5BJE1 867 aa14.54□□□□□ -0.08
MRPL55-209ENST00000366735 GPATCH4Q5T3I0 446 aaKnown RBP14.54□□□□□ -0.08
MRPL55-209ENST00000366735 MFSD6Q6ZSS7 791 aa14.54□□□□□ -0.08
MRPL55-209ENST00000366735 RASGRP2Q7LDG7 609 aa14.54□□□□□ -0.08
MRPL55-209ENST00000366735 SCFD2Q8WU76 684 aa14.54□□□□□ -0.08
MRPL55-209ENST00000366735 MTG1Q9BT17 334 aaPredicted RBP14.54□□□□□ -0.08
MRPL55-209ENST00000366735 MAF1Q9H063 256 aa14.54□□□□□ -0.08
MRPL55-209ENST00000366735 GPCPD1Q9NPB8 672 aa14.54□□□□□ -0.08
MRPL55-209ENST00000366735 TNKSO95271 1327 aa14.54□□□□□ -0.08
MRPL55-209ENST00000366735 CCDC171Q6TFL3 1326 aa14.54□□□□□ -0.08
MRPL55-209ENST00000366735 RBM47A0AV96 593 aaKnown RBP14.53□□□□□ -0.08
MRPL55-209ENST00000366735 TRIM6-TRIM34B2RNG4 842 aa14.53□□□□□ -0.08
MRPL55-209ENST00000366735 FGAP02671 866 aa14.53□□□□□ -0.08
MRPL55-209ENST00000366735 MYL3P08590 195 aa14.53□□□□□ -0.08
MRPL55-209ENST00000366735 HSPD1P10809 573 aaKnown RBP14.53□□□□□ -0.08
MRPL55-209ENST00000366735 IGFBP4P22692 258 aa14.53□□□□□ -0.08
MRPL55-209ENST00000366735 PURAQ00577 322 aaKnown RBP14.53□□□□□ -0.08
MRPL55-209ENST00000366735 FAM47CQ5HY64 1035 aa14.53□□□□□ -0.08
MRPL55-209ENST00000366735 PPP2R2DQ66LE6 453 aa14.53□□□□□ -0.08
MRPL55-209ENST00000366735 TTBK2Q6IQ55 1244 aa14.53□□□□□ -0.08
MRPL55-209ENST00000366735 SLC30A10Q6XR72 485 aa14.53□□□□□ -0.08
MRPL55-209ENST00000366735 USP38Q8NB14 1042 aa14.53□□□□□ -0.08
MRPL55-209ENST00000366735 PPM1EQ8WY54 764 aa14.53□□□□□ -0.08
MRPL55-209ENST00000366735 ESR2Q92731 530 aa14.53□□□□□ -0.08
MRPL55-209ENST00000366735 TRPV6Q9H1D0 765 aa14.53□□□□□ -0.08
MRPL55-209ENST00000366735 NKX2-4Q9H2Z4 354 aa14.53□□□□□ -0.08
MRPL55-209ENST00000366735 INCENPQ9NQS7 918 aa14.53□□□□□ -0.08
MRPL55-209ENST00000366735 PRDM6Q9NQX0 595 aa14.53□□□□□ -0.08
MRPL55-209ENST00000366735 CXXC1Q9P0U4 656 aaPredicted RBP14.53□□□□□ -0.08
MRPL55-209ENST00000366735 PCDHA11Q9Y5I1 949 aa14.53□□□□□ -0.08
MRPL55-209ENST00000366735 GRIN2DO15399 1336 aa14.52□□□□□ -0.08
MRPL55-209ENST00000366735 UMODL1Q5DID0 1318 aa14.52□□□□□ -0.08
MRPL55-209ENST00000366735 A0A0D9SFI3 127 aa14.52□□□□□ -0.09
MRPL55-209ENST00000366735 PTPN11Q06124 597 aaPredicted RBP14.52□□□□□ -0.09
MRPL55-209ENST00000366735 ZNF543Q08ER8 600 aa14.52□□□□□ -0.09
MRPL55-209ENST00000366735 TTLL4Q14679 1199 aa14.52□□□□□ -0.09
MRPL55-209ENST00000366735 NFRKBQ6P4R8 1299 aa14.52□□□□□ -0.09
MRPL55-209ENST00000366735 IQCA1Q86XH1 822 aa14.52□□□□□ -0.09
MRPL55-209ENST00000366735 CCDC155Q8N6L0 562 aa14.52□□□□□ -0.09
MRPL55-209ENST00000366735 FAM227BQ96M60 508 aa14.52□□□□□ -0.09
MRPL55-209ENST00000366735 WNT8AQ9H1J5 351 aa14.52□□□□□ -0.09
MRPL55-209ENST00000366735 NOD1Q9Y239 953 aa14.52□□□□□ -0.09
MRPL55-209ENST00000366735 PTPRSQ13332 1948 aa14.52□□□□□ -0.09
MRPL55-209ENST00000366735 COL4A4P53420 1690 aaPredicted RBP14.52□□□□□ -0.09
MRPL55-209ENST00000366735 TNFRSF10AO00220 468 aa14.51□□□□□ -0.09
MRPL55-209ENST00000366735 PITPNM1O00562 1244 aa14.51□□□□□ -0.09
MRPL55-209ENST00000366735 ATP2A2P16615 1042 aaKnown RBP14.51□□□□□ -0.09
MRPL55-209ENST00000366735 HAND2P61296 217 aa14.51□□□□□ -0.09
MRPL55-209ENST00000366735 RPS6P62753 249 aaKnown RBP14.51□□□□□ -0.09
MRPL55-209ENST00000366735 BFSP2Q13515 415 aa14.51□□□□□ -0.09
MRPL55-209ENST00000366735 RETREG2Q8NC44 543 aa14.51□□□□□ -0.09
MRPL55-209ENST00000366735 RILPL2Q969X0 211 aa14.51□□□□□ -0.09
MRPL55-209ENST00000366735 SCLYQ96I15 445 aa14.51□□□□□ -0.09
MRPL55-209ENST00000366735 SLC9A7Q96T83 725 aa14.51□□□□□ -0.09
MRPL55-209ENST00000366735 DDX49Q9Y6V7 483 aaKnown RBP14.51□□□□□ -0.09
MRPL55-209ENST00000366735 ABCB11O95342 1321 aa14.5□□□□□ -0.09
MRPL55-209ENST00000366735 ZNF213O14771 459 aa14.5□□□□□ -0.09
MRPL55-209ENST00000366735 SNHG28P0DPA3 235 aa14.5□□□□□ -0.09
MRPL55-209ENST00000366735 EDNRBP24530 442 aa14.5□□□□□ -0.09
MRPL55-209ENST00000366735 MRPS5P82675 430 aaKnown RBP14.5□□□□□ -0.09
MRPL55-209ENST00000366735 NUCB1Q02818 461 aa14.5□□□□□ -0.09
MRPL55-209ENST00000366735 NMIQ13287 307 aaPredicted RBP14.5□□□□□ -0.09
MRPL55-209ENST00000366735 RGS22Q8NE09 1264 aa14.5□□□□□ -0.09
MRPL55-209ENST00000366735 CLEC4DQ8WXI8 215 aa14.5□□□□□ -0.09
MRPL55-209ENST00000366735 PURBQ96QR8 312 aaKnown RBP14.5□□□□□ -0.09
MRPL55-209ENST00000366735 TRMT13Q9NUP7 481 aaKnown RBP14.5□□□□□ -0.09
MRPL55-209ENST00000366735 SPTBN5Q9NRC6 3674 aaKnown RBP14.5□□□□□ -0.09
MRPL55-209ENST00000366735 SIP14410 1827 aa14.5□□□□□ -0.09
MRPL55-209ENST00000366735 TCF20Q9UGU0 1960 aaKnown RBP14.49□□□□□ -0.09
MRPL55-209ENST00000366735 A6NJR5 290 aa14.49□□□□□ -0.09
MRPL55-209ENST00000366735 HIP1O00291 1037 aa14.49□□□□□ -0.09
MRPL55-209ENST00000366735 TXNP10599 105 aaKnown RBP14.49□□□□□ -0.09
MRPL55-209ENST00000366735 CYP2C9P11712 490 aa14.49□□□□□ -0.09
MRPL55-209ENST00000366735 PTGS1P23219 599 aa14.49□□□□□ -0.09
MRPL55-209ENST00000366735 AAK1Q2M2I8 961 aa14.49□□□□□ -0.09
MRPL55-209ENST00000366735 USH1GQ495M9 461 aa14.49□□□□□ -0.09
MRPL55-209ENST00000366735 TMEM67Q5HYA8 995 aa14.49□□□□□ -0.09
MRPL55-209ENST00000366735 DEFB128Q7Z7B8 93 aa14.49□□□□□ -0.09
MRPL55-209ENST00000366735 ZNF589Q86UQ0 364 aaPredicted RBP14.49□□□□□ -0.09
MRPL55-209ENST00000366735 DGKHQ86XP1 1220 aa14.49□□□□□ -0.09
MRPL55-209ENST00000366735 MCF2L2Q86YR7 1114 aa14.49□□□□□ -0.09
MRPL55-209ENST00000366735 RASEFQ8IZ41 740 aa14.49□□□□□ -0.09
MRPL55-209ENST00000366735 ASB2Q96Q27 587 aa14.49□□□□□ -0.09
MRPL55-209ENST00000366735 KAT14Q9H8E8 782 aa14.49□□□□□ -0.09
MRPL55-209ENST00000366735 YBX2Q9Y2T7 364 aaKnown RBP14.49□□□□□ -0.09
MRPL55-209ENST00000366735 TET1Q8NFU7 2136 aa14.48□□□□□ -0.09
MRPL55-209ENST00000366735 KIF28PB7ZC32 967 aa14.48□□□□□ -0.09
MRPL55-209ENST00000366735 CDC37Q16543 378 aaPredicted RBP14.48□□□□□ -0.09
MRPL55-209ENST00000366735 NBPF20Q3BBV1 942 aa14.48□□□□□ -0.09
MRPL55-209ENST00000366735 ASPRV1Q53RT3 343 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms