RNA–Protein interactions for RNA: ENST00000363313.1

RNU6-238P-201, Transcript of RNA, U6 small nuclear 238, pseudogene, humanhuman

BASIC

Gene RNU6-238P, Length 106 nt, Biotype snRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-238P-201ENST00000363313 ZNRF3Q9ULT6 936 aa4.26□□□□□ -1.73
RNU6-238P-201ENST00000363313 CYP7B1O75881 506 aa4.25□□□□□ -1.73
RNU6-238P-201ENST00000363313 C8BP07358 591 aa4.25□□□□□ -1.73
RNU6-238P-201ENST00000363313 CD3EP07766 207 aa4.25□□□□□ -1.73
RNU6-238P-201ENST00000363313 ACRP10323 421 aa4.25□□□□□ -1.73
RNU6-238P-201ENST00000363313 IFNGR1P15260 489 aa4.25□□□□□ -1.73
RNU6-238P-201ENST00000363313 ERCC3P19447 782 aa4.25□□□□□ -1.73
RNU6-238P-201ENST00000363313 TGFB2P61812 414 aa4.25□□□□□ -1.73
RNU6-238P-201ENST00000363313 PKN3Q6P5Z2 889 aa4.25□□□□□ -1.73
RNU6-238P-201ENST00000363313 LIMS2Q7Z4I7 341 aa4.25□□□□□ -1.73
RNU6-238P-201ENST00000363313 CIR1Q86X95 450 aaPredicted RBP4.25□□□□□ -1.73
RNU6-238P-201ENST00000363313 BRF1Q92994 677 aa4.25□□□□□ -1.73
RNU6-238P-201ENST00000363313 FAM161BQ96MY7 647 aa4.25□□□□□ -1.73
RNU6-238P-201ENST00000363313 UBP1Q9NZI7 540 aa4.25□□□□□ -1.73
RNU6-238P-201ENST00000363313 WHRNQ9P202 907 aa4.25□□□□□ -1.73
RNU6-238P-201ENST00000363313 ADAMTS1Q9UHI8 967 aa4.25□□□□□ -1.73
RNU6-238P-201ENST00000363313 PATE3B3GLJ2 98 aa4.24□□□□□ -1.73
RNU6-238P-201ENST00000363313 NPHS1O60500 1241 aa4.24□□□□□ -1.73
RNU6-238P-201ENST00000363313 AMHP03971 560 aa4.24□□□□□ -1.73
RNU6-238P-201ENST00000363313 SELENOPP49908 381 aa4.24□□□□□ -1.73
RNU6-238P-201ENST00000363313 PPP2CBP62714 309 aa4.24□□□□□ -1.73
RNU6-238P-201ENST00000363313 PPP2CAP67775 309 aa4.24□□□□□ -1.73
RNU6-238P-201ENST00000363313 ICAM4Q14773 271 aa4.24□□□□□ -1.73
RNU6-238P-201ENST00000363313 C9orf131Q5VYM1 1079 aa4.24□□□□□ -1.73
RNU6-238P-201ENST00000363313 DCAF15Q66K64 600 aa4.24□□□□□ -1.73
RNU6-238P-201ENST00000363313 MCTP2Q6DN12 878 aa4.24□□□□□ -1.73
RNU6-238P-201ENST00000363313 SND1Q7KZF4 910 aaKnown RBP eCLIP4.24□□□□□ -1.73
RNU6-238P-201ENST00000363313 HS2ST1Q7LGA3 356 aa4.24□□□□□ -1.73
RNU6-238P-201ENST00000363313 USP33Q8TEY7 942 aa4.24□□□□□ -1.73
RNU6-238P-201ENST00000363313 AP5M1Q9H0R1 490 aa4.24□□□□□ -1.73
RNU6-238P-201ENST00000363313 DEF6Q9H4E7 631 aa4.24□□□□□ -1.73
RNU6-238P-201ENST00000363313 ZNF214Q9UL59 606 aaPredicted RBP4.24□□□□□ -1.73
RNU6-238P-201ENST00000363313 TCAF1Q9Y4C2 921 aa4.24□□□□□ -1.73
RNU6-238P-201ENST00000363313 ZNF451Q9Y4E5 1061 aa4.24□□□□□ -1.73
RNU6-238P-201ENST00000363313 DDX3XO00571 662 aaKnown RBP eCLIP4.23□□□□□ -1.73
RNU6-238P-201ENST00000363313 B4GALT3O60512 393 aa4.23□□□□□ -1.73
RNU6-238P-201ENST00000363313 PPP1R11O60927 126 aaPredicted RBP4.23□□□□□ -1.73
RNU6-238P-201ENST00000363313 PAMP19021 973 aa4.23□□□□□ -1.73
RNU6-238P-201ENST00000363313 SEPHS1P49903 392 aa4.23□□□□□ -1.73
RNU6-238P-201ENST00000363313 GRB10Q13322 594 aa4.23□□□□□ -1.73
RNU6-238P-201ENST00000363313 R3HDM1Q15032 1099 aaKnown RBP4.23□□□□□ -1.73
RNU6-238P-201ENST00000363313 SLFN13Q68D06 897 aa4.23□□□□□ -1.73
RNU6-238P-201ENST00000363313 PPFIBP1Q86W92 1011 aa4.23□□□□□ -1.73
RNU6-238P-201ENST00000363313 SEC14L1Q92503 715 aa4.23□□□□□ -1.73
RNU6-238P-201ENST00000363313 NOL6Q9H6R4 1146 aaKnown RBP4.23□□□□□ -1.73
RNU6-238P-201ENST00000363313 BCAS3Q9H6U6 928 aa4.23□□□□□ -1.73
RNU6-238P-201ENST00000363313 RWDD3Q9Y3V2 267 aa4.23□□□□□ -1.73
RNU6-238P-201ENST00000363313 C2orf71A6NGG8 1288 aa4.22□□□□□ -1.73
RNU6-238P-201ENST00000363313 GPR42O15529 346 aa4.22□□□□□ -1.73
RNU6-238P-201ENST00000363313 ZNF28P17035 718 aa4.22□□□□□ -1.73
RNU6-238P-201ENST00000363313 SLC6A11P48066 632 aa4.22□□□□□ -1.73
RNU6-238P-201ENST00000363313 ITGA1P56199 1179 aa4.22□□□□□ -1.73
RNU6-238P-201ENST00000363313 DNAJC14Q6Y2X3 702 aaPredicted RBP4.22□□□□□ -1.73
RNU6-238P-201ENST00000363313 AMER2Q8N7J2 671 aa4.22□□□□□ -1.73
RNU6-238P-201ENST00000363313 RCC1LQ96I51 464 aaKnown RBP4.22□□□□□ -1.73
RNU6-238P-201ENST00000363313 ZDHHC15Q96MV8 337 aa4.22□□□□□ -1.73
RNU6-238P-201ENST00000363313 RXFP1Q9HBX9 757 aa4.22□□□□□ -1.73
RNU6-238P-201ENST00000363313 GGT7Q9UJ14 662 aa4.22□□□□□ -1.73
RNU6-238P-201ENST00000363313 BACE2Q9Y5Z0 518 aa4.22□□□□□ -1.73
RNU6-238P-201ENST00000363313 SLC12A7Q9Y666 1083 aa4.22□□□□□ -1.73
RNU6-238P-201ENST00000363313 LTBP3Q9NS15 1303 aa4.21□□□□□ -1.73
RNU6-238P-201ENST00000363313 NPHP3-ACAD11A0A0J9YXS1 232 aa4.21□□□□□ -1.74
RNU6-238P-201ENST00000363313 MUSKO15146 869 aa4.21□□□□□ -1.74
RNU6-238P-201ENST00000363313 ZNF623O75123 536 aa4.21□□□□□ -1.74
RNU6-238P-201ENST00000363313 NTRK1P04629 796 aa4.21□□□□□ -1.74
RNU6-238P-201ENST00000363313 GUCY2CP25092 1073 aa4.21□□□□□ -1.74
RNU6-238P-201ENST00000363313 SMN1Q16637 294 aaKnown RBP4.21□□□□□ -1.74
RNU6-238P-201ENST00000363313 TDRD10Q5VZ19 366 aaKnown RBP4.21□□□□□ -1.74
RNU6-238P-201ENST00000363313 CD300LDQ6UXZ3 194 aa4.21□□□□□ -1.74
RNU6-238P-201ENST00000363313 UNC5AQ6ZN44 842 aa4.21□□□□□ -1.74
RNU6-238P-201ENST00000363313 ARHGEF18Q6ZSZ5 1173 aa4.21□□□□□ -1.74
RNU6-238P-201ENST00000363313 FAM126BQ8IXS8 530 aa4.21□□□□□ -1.74
RNU6-238P-201ENST00000363313 PLEKHO2Q8TD55 490 aa4.21□□□□□ -1.74
RNU6-238P-201ENST00000363313 MBD6Q96DN6 1003 aa4.21□□□□□ -1.74
RNU6-238P-201ENST00000363313 YTHDC1Q96MU7 727 aaKnown RBP4.21□□□□□ -1.74
RNU6-238P-201ENST00000363313 WRNIP1Q96S55 665 aa4.21□□□□□ -1.74
RNU6-238P-201ENST00000363313 MMP19Q99542 508 aa4.21□□□□□ -1.74
RNU6-238P-201ENST00000363313 TRAIPQ9BWF2 469 aa4.21□□□□□ -1.74
RNU6-238P-201ENST00000363313 GBP3Q9H0R5 595 aa4.21□□□□□ -1.74
RNU6-238P-201ENST00000363313 TMEM168Q9H0V1 697 aa4.21□□□□□ -1.74
RNU6-238P-201ENST00000363313 FBLN5Q9UBX5 448 aa4.21□□□□□ -1.74
RNU6-238P-201ENST00000363313 HS3ST3A1Q9Y663 406 aa4.21□□□□□ -1.74
RNU6-238P-201ENST00000363313 WDR33Q9C0J8 1336 aaKnown RBP4.21□□□□□ -1.74
RNU6-238P-201ENST00000363313 C7orf72A4D263 438 aa4.2□□□□□ -1.74
RNU6-238P-201ENST00000363313 PPM1BO75688 479 aa4.2□□□□□ -1.74
RNU6-238P-201ENST00000363313 CYP1A1P04798 512 aaPredicted RBP4.2□□□□□ -1.74
RNU6-238P-201ENST00000363313 INHBEP58166 350 aa4.2□□□□□ -1.74
RNU6-238P-201ENST00000363313 NKX3-2P78367 333 aa4.2□□□□□ -1.74
RNU6-238P-201ENST00000363313 HS1BP3Q53T59 392 aa4.2□□□□□ -1.74
RNU6-238P-201ENST00000363313 RIOX2Q8IUF8 465 aa4.2□□□□□ -1.74
RNU6-238P-201ENST00000363313 KLHL36Q8N4N3 616 aa4.2□□□□□ -1.74
RNU6-238P-201ENST00000363313 ARHGEF39Q8N4T4 335 aa4.2□□□□□ -1.74
RNU6-238P-201ENST00000363313 C11orf21Q9P2W6 132 aa4.2□□□□□ -1.74
RNU6-238P-201ENST00000363313 GULP1Q9UBP9 304 aa4.2□□□□□ -1.74
RNU6-238P-201ENST00000363313 SGSM2O43147 1006 aa4.19□□□□□ -1.74
RNU6-238P-201ENST00000363313 CBFA2T2O43439 604 aa4.19□□□□□ -1.74
RNU6-238P-201ENST00000363313 TP53P04637 393 aaPredicted RBP4.19□□□□□ -1.74
RNU6-238P-201ENST00000363313 IL13P35225 146 aa4.19□□□□□ -1.74
RNU6-238P-201ENST00000363313 AMPD2Q01433 879 aa4.19□□□□□ -1.74
RNU6-238P-201ENST00000363313 KLF10Q13118 480 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms