RNA–Protein interactions for RNA: ENST00000359429.10

RPE-202, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPE, Length 2,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-202ENST00000359429 LCA5LO95447 670 aa12.08□□□□□ -0.48
RPE-202ENST00000359429 TCP1P17987 556 aaKnown RBP12.08□□□□□ -0.48
RPE-202ENST00000359429 KIF5BP33176 963 aa12.08□□□□□ -0.48
RPE-202ENST00000359429 SKOR1P84550 965 aa12.08□□□□□ -0.48
RPE-202ENST00000359429 TFAP4Q01664 338 aa12.08□□□□□ -0.48
RPE-202ENST00000359429 RASSF7Q02833 373 aa12.08□□□□□ -0.48
RPE-202ENST00000359429 TRADDQ15628 312 aa12.08□□□□□ -0.48
RPE-202ENST00000359429 VWA3BQ502W6 1294 aa12.08□□□□□ -0.48
RPE-202ENST00000359429 EMBQ6PCB8 327 aa12.08□□□□□ -0.48
RPE-202ENST00000359429 GBP6Q6ZN66 633 aa12.08□□□□□ -0.48
RPE-202ENST00000359429 RRAGAQ7L523 313 aa12.08□□□□□ -0.48
RPE-202ENST00000359429 PNMA1Q8ND90 353 aa12.08□□□□□ -0.48
RPE-202ENST00000359429 C7orf25Q9BPX7 421 aa12.08□□□□□ -0.48
RPE-202ENST00000359429 MMTAG2Q9BU76 263 aaKnown RBP12.08□□□□□ -0.48
RPE-202ENST00000359429 NDST4Q9H3R1 872 aa12.08□□□□□ -0.48
RPE-202ENST00000359429 MMRN2Q9H8L6 949 aa12.08□□□□□ -0.48
RPE-202ENST00000359429 SH3GLB2Q9NR46 395 aa12.08□□□□□ -0.48
RPE-202ENST00000359429 MAD2L2Q9UI95 211 aa12.08□□□□□ -0.48
RPE-202ENST00000359429 NIP7Q9Y221 180 aaKnown RBP eCLIP12.08□□□□□ -0.48
RPE-202ENST00000359429 OPA1O60313 960 aa12.08□□□□□ -0.48
RPE-202ENST00000359429 PRDX5P30044 214 aa12.08□□□□□ -0.48
RPE-202ENST00000359429 HNRNPH1P31943 449 aaKnown RBP12.08□□□□□ -0.48
RPE-202ENST00000359429 MAGEA1P43355 309 aa12.08□□□□□ -0.48
RPE-202ENST00000359429 ASTE1Q2TB18 679 aaPredicted RBP12.08□□□□□ -0.48
RPE-202ENST00000359429 CCDC181Q5TID7 509 aa12.08□□□□□ -0.48
RPE-202ENST00000359429 BAP1Q92560 729 aa12.08□□□□□ -0.48
RPE-202ENST00000359429 CAVIN3Q969G5 261 aa12.08□□□□□ -0.48
RPE-202ENST00000359429 DYNLL2Q96FJ2 89 aa12.08□□□□□ -0.48
RPE-202ENST00000359429 DEF6Q9H4E7 631 aa12.08□□□□□ -0.48
RPE-202ENST00000359429 NFU1Q9UMS0 254 aa12.08□□□□□ -0.48
RPE-202ENST00000359429 JAG2Q9Y219 1238 aa12.08□□□□□ -0.48
RPE-202ENST00000359429 DLEC1Q9Y238 1755 aa12.07□□□□□ -0.48
RPE-202ENST00000359429 ZNF335Q9H4Z2 1342 aaPredicted RBP12.07□□□□□ -0.48
RPE-202ENST00000359429 SHTN1A0MZ66 631 aa12.07□□□□□ -0.48
RPE-202ENST00000359429 USP17L3A6NCW0 530 aa12.07□□□□□ -0.48
RPE-202ENST00000359429 USP17L4A6NCW7 530 aa12.07□□□□□ -0.48
RPE-202ENST00000359429 ZNF233A6NK53 670 aa12.07□□□□□ -0.48
RPE-202ENST00000359429 STXBP3O00186 592 aa12.07□□□□□ -0.48
RPE-202ENST00000359429 TECP42680 631 aa12.07□□□□□ -0.48
RPE-202ENST00000359429 SLC1A4P43007 532 aa12.07□□□□□ -0.48
RPE-202ENST00000359429 DNA2P51530 1060 aa12.07□□□□□ -0.48
RPE-202ENST00000359429 APBA1Q02410 837 aa12.07□□□□□ -0.48
RPE-202ENST00000359429 LETM2Q2VYF4 491 aa12.07□□□□□ -0.48
RPE-202ENST00000359429 ALS2CLQ60I27 953 aa12.07□□□□□ -0.48
RPE-202ENST00000359429 CENPPQ6IPU0 288 aa12.07□□□□□ -0.48
RPE-202ENST00000359429 C8orf74Q6P047 294 aa12.07□□□□□ -0.48
RPE-202ENST00000359429 USP17L1Q7RTZ2 530 aa12.07□□□□□ -0.48
RPE-202ENST00000359429 FAM114A1Q8IWE2 563 aa12.07□□□□□ -0.48
RPE-202ENST00000359429 PIK3R5Q8WYR1 880 aa12.07□□□□□ -0.48
RPE-202ENST00000359429 RNPC3Q96LT9 517 aaKnown RBP12.07□□□□□ -0.48
RPE-202ENST00000359429 FAM107BQ9H098 131 aa12.07□□□□□ -0.48
RPE-202ENST00000359429 YY1AP1Q9H869 796 aa12.07□□□□□ -0.48
RPE-202ENST00000359429 HSF2BPO75031 334 aa12.07□□□□□ -0.48
RPE-202ENST00000359429 GOLGA8HP0CJ92 632 aa12.07□□□□□ -0.48
RPE-202ENST00000359429 GUCY1A3Q02108 690 aa12.07□□□□□ -0.48
RPE-202ENST00000359429 NNTQ13423 1086 aa12.07□□□□□ -0.48
RPE-202ENST00000359429 IQCKQ8N0W5 287 aa12.07□□□□□ -0.48
RPE-202ENST00000359429 GLIS3Q8NEA6 775 aa12.07□□□□□ -0.48
RPE-202ENST00000359429 CCDC43Q96MW1 224 aaKnown RBP12.07□□□□□ -0.48
RPE-202ENST00000359429 XIRP1Q702N8 1843 aaKnown RBP12.06□□□□□ -0.48
RPE-202ENST00000359429 NDUFAB1O14561 156 aa12.06□□□□□ -0.48
RPE-202ENST00000359429 ZEB2O60315 1214 aa12.06□□□□□ -0.48
RPE-202ENST00000359429 CCNT1O60563 726 aaKnown RBP12.06□□□□□ -0.48
RPE-202ENST00000359429 ADAMTS2O95450 1211 aa12.06□□□□□ -0.48
RPE-202ENST00000359429 INPP5BP32019 993 aa12.06□□□□□ -0.48
RPE-202ENST00000359429 PRPHP41219 470 aa12.06□□□□□ -0.48
RPE-202ENST00000359429 UBE4AQ14139 1066 aa12.06□□□□□ -0.48
RPE-202ENST00000359429 CAVIN4Q5BKX8 364 aa12.06□□□□□ -0.48
RPE-202ENST00000359429 HGSNATQ68CP4 663 aa12.06□□□□□ -0.48
RPE-202ENST00000359429 ALS2CR12Q96Q35 445 aa12.06□□□□□ -0.48
RPE-202ENST00000359429 TCP11L1Q9NUJ3 509 aa12.06□□□□□ -0.48
RPE-202ENST00000359429 BARHL2Q9NY43 387 aa12.06□□□□□ -0.48
RPE-202ENST00000359429 MINPP1Q9UNW1 487 aa12.06□□□□□ -0.48
RPE-202ENST00000359429 PJA2O43164 708 aa12.06□□□□□ -0.48
RPE-202ENST00000359429 OR52Z1P0C646 297 aa12.06□□□□□ -0.48
RPE-202ENST00000359429 PAFAH1B1P43034 410 aa12.06□□□□□ -0.48
RPE-202ENST00000359429 GRM4Q14833 912 aa12.06□□□□□ -0.48
RPE-202ENST00000359429 KCTD19Q17RG1 926 aaPredicted RBP12.06□□□□□ -0.48
RPE-202ENST00000359429 MCTP2Q6DN12 878 aa12.06□□□□□ -0.48
RPE-202ENST00000359429 DAGLBQ8NCG7 672 aa12.06□□□□□ -0.48
RPE-202ENST00000359429 IFT81Q8WYA0 676 aa12.06□□□□□ -0.48
RPE-202ENST00000359429 RUBCNQ92622 972 aa12.06□□□□□ -0.48
RPE-202ENST00000359429 RUFY1Q96T51 708 aa12.06□□□□□ -0.48
RPE-202ENST00000359429 CRNKL1Q9BZJ0 848 aaKnown RBP12.06□□□□□ -0.48
RPE-202ENST00000359429 CUEDC2Q9H467 287 aa12.06□□□□□ -0.48
RPE-202ENST00000359429 EPB41L5Q9HCM4 733 aa12.06□□□□□ -0.48
RPE-202ENST00000359429 GDF3Q9NR23 364 aa12.06□□□□□ -0.48
RPE-202ENST00000359429 MCM9Q9NXL9 1143 aa12.06□□□□□ -0.48
RPE-202ENST00000359429 ITGB4P16144 1822 aa12.06□□□□□ -0.48
RPE-202ENST00000359429 MYMKA6NI61 221 aa12.05□□□□□ -0.48
RPE-202ENST00000359429 TNFRSF8P28908 595 aa12.05□□□□□ -0.48
RPE-202ENST00000359429 CRKLP46109 303 aaKnown RBP12.05□□□□□ -0.48
RPE-202ENST00000359429 GUCY2FP51841 1108 aa12.05□□□□□ -0.48
RPE-202ENST00000359429 GUCY2DQ02846 1103 aa12.05□□□□□ -0.48
RPE-202ENST00000359429 PPARDQ03181 441 aa12.05□□□□□ -0.48
RPE-202ENST00000359429 KCNMA1Q12791 1236 aa12.05□□□□□ -0.48
RPE-202ENST00000359429 SEMA3FQ13275 785 aa12.05□□□□□ -0.48
RPE-202ENST00000359429 DYMQ7RTS9 669 aa12.05□□□□□ -0.48
RPE-202ENST00000359429 BLOC1S4Q9NUP1 217 aa12.05□□□□□ -0.48
RPE-202ENST00000359429 TFCP2L1Q9NZI6 479 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms