RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 PNPLA7Q6ZV29 1317 aa7.27□□□□□ -1.25
CSDE1-203ENST00000358528 KLRK1P26718 216 aa7.27□□□□□ -1.25
CSDE1-203ENST00000358528 IL6STP40189 918 aaPredicted RBP7.27□□□□□ -1.25
CSDE1-203ENST00000358528 PBX1P40424 430 aa7.27□□□□□ -1.25
CSDE1-203ENST00000358528 SLC1A4P43007 532 aa7.27□□□□□ -1.25
CSDE1-203ENST00000358528 CPLX4Q7Z7G2 160 aa7.27□□□□□ -1.25
CSDE1-203ENST00000358528 CCDC84Q86UT8 332 aaPredicted RBP7.27□□□□□ -1.25
CSDE1-203ENST00000358528 ELOA2Q8IYF1 753 aaPredicted RBP7.27□□□□□ -1.25
CSDE1-203ENST00000358528 CCDC170Q8IYT3 715 aa7.27□□□□□ -1.25
CSDE1-203ENST00000358528 REXO1Q8N1G1 1221 aaKnown RBP7.27□□□□□ -1.25
CSDE1-203ENST00000358528 CELF1Q92879 486 aaKnown RBP7.27□□□□□ -1.25
CSDE1-203ENST00000358528 AP1M1Q9BXS5 423 aa7.27□□□□□ -1.25
CSDE1-203ENST00000358528 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.27□□□□□ -1.256e-7■■■■■ 114.9
CSDE1-203ENST00000358528 TMEM260Q9NX78 707 aa7.27□□□□□ -1.25
CSDE1-203ENST00000358528 SNX12Q9UMY4 172 aa7.27□□□□□ -1.25
CSDE1-203ENST00000358528 CORO7P57737 925 aa7.26□□□□□ -1.25
CSDE1-203ENST00000358528 TNNC1P63316 161 aa7.26□□□□□ -1.25
CSDE1-203ENST00000358528 PARP10Q53GL7 1025 aa7.26□□□□□ -1.25
CSDE1-203ENST00000358528 B4GALNT4Q76KP1 1039 aa7.26□□□□□ -1.25
CSDE1-203ENST00000358528 SH3RF1Q7Z6J0 888 aa7.26□□□□□ -1.25
CSDE1-203ENST00000358528 NEK8Q86SG6 692 aa7.26□□□□□ -1.25
CSDE1-203ENST00000358528 LRRC47Q8N1G4 583 aaKnown RBP7.26□□□□□ -1.25
CSDE1-203ENST00000358528 FAM133AQ8N9E0 248 aa7.26□□□□□ -1.25
CSDE1-203ENST00000358528 RBM12Q9NTZ6 932 aaKnown RBP7.26□□□□□ -1.25
CSDE1-203ENST00000358528 MED1Q15648 1581 aaPredicted RBP7.26□□□□□ -1.25
CSDE1-203ENST00000358528 ARHGAP23Q9P227 1491 aa7.26□□□□□ -1.25
CSDE1-203ENST00000358528 TMEM110-MUSTN1A8MSY1 372 aa7.26□□□□□ -1.25
CSDE1-203ENST00000358528 PALMO75781 387 aa7.26□□□□□ -1.25
CSDE1-203ENST00000358528 SRGNP10124 158 aa7.26□□□□□ -1.25
CSDE1-203ENST00000358528 FGFR2P21802 821 aa7.26□□□□□ -1.25
CSDE1-203ENST00000358528 CARSP49589 748 aaKnown RBP7.26□□□□□ -1.25
CSDE1-203ENST00000358528 LLGL1Q15334 1064 aa7.26□□□□□ -1.25
CSDE1-203ENST00000358528 DDB1Q16531 1140 aa7.26□□□□□ -1.25
CSDE1-203ENST00000358528 VWA3BQ502W6 1294 aa7.26□□□□□ -1.25
CSDE1-203ENST00000358528 ARL6IP4Q66PJ3 421 aaKnown RBP7.26□□□□□ -1.25
CSDE1-203ENST00000358528 WDR93Q6P2C0 686 aa7.26□□□□□ -1.25
CSDE1-203ENST00000358528 WDR59Q6PJI9 974 aa7.26□□□□□ -1.25
CSDE1-203ENST00000358528 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.26□□□□□ -1.25
CSDE1-203ENST00000358528 KRT25Q7Z3Z0 450 aa7.26□□□□□ -1.25
CSDE1-203ENST00000358528 ZNF512BQ96KM6 892 aaPredicted RBP7.26□□□□□ -1.25
CSDE1-203ENST00000358528 PIGSQ96S52 555 aa7.26□□□□□ -1.25
CSDE1-203ENST00000358528 SEC24CP53992 1094 aa7.26□□□□□ -1.25
CSDE1-203ENST00000358528 RPS8P62241 208 aaKnown RBP7.26□□□□□ -1.25
CSDE1-203ENST00000358528 RPS6KA1Q15418 735 aa7.26□□□□□ -1.25
CSDE1-203ENST00000358528 ASIC2Q16515 512 aa7.26□□□□□ -1.25
CSDE1-203ENST00000358528 GBP6Q6ZN66 633 aa7.26□□□□□ -1.25
CSDE1-203ENST00000358528 BRINP3Q76B58 766 aa7.26□□□□□ -1.25
CSDE1-203ENST00000358528 FNBP4Q8N3X1 1017 aaPredicted RBP7.26□□□□□ -1.25
CSDE1-203ENST00000358528 SPATA20Q8TB22 786 aa7.26□□□□□ -1.25
CSDE1-203ENST00000358528 DYDC1Q8WWB3 177 aa7.26□□□□□ -1.25
CSDE1-203ENST00000358528 SHISA4Q96DD7 197 aa7.26□□□□□ -1.25
CSDE1-203ENST00000358528 SETDB2Q96T68 719 aa7.26□□□□□ -1.25
CSDE1-203ENST00000358528 EYA3Q99504 573 aa7.26□□□□□ -1.25
CSDE1-203ENST00000358528 JPH2Q9BR39 696 aaPredicted RBP7.26□□□□□ -1.25
CSDE1-203ENST00000358528 TRIM9Q9C026 710 aa7.26□□□□□ -1.25
CSDE1-203ENST00000358528 ARPP21Q9UBL0 812 aaPredicted RBP7.26□□□□□ -1.25
CSDE1-203ENST00000358528 MYH8P13535 1937 aa7.26□□□□□ -1.25
CSDE1-203ENST00000358528 LAMA4Q16363 1823 aa7.26□□□□□ -1.25
CSDE1-203ENST00000358528 ABCC6O95255 1503 aa7.25□□□□□ -1.25
CSDE1-203ENST00000358528 KRT13P13646 458 aa7.25□□□□□ -1.25
CSDE1-203ENST00000358528 CTNNA1P35221 906 aaKnown RBP7.25□□□□□ -1.25
CSDE1-203ENST00000358528 AMPD2Q01433 879 aa7.25□□□□□ -1.25
CSDE1-203ENST00000358528 KRT71Q3SY84 523 aa7.25□□□□□ -1.25
CSDE1-203ENST00000358528 ZSCAN29Q8IWY8 852 aaPredicted RBP7.25□□□□□ -1.25
CSDE1-203ENST00000358528 TEX11Q8IYF3 940 aa7.25□□□□□ -1.25
CSDE1-203ENST00000358528 OR2W6PQ8NHA6 318 aa7.25□□□□□ -1.25
CSDE1-203ENST00000358528 LARP4BQ92615 738 aaKnown RBP7.25□□□□□ -1.25
CSDE1-203ENST00000358528 CABS1Q96KC9 395 aa7.25□□□□□ -1.25
CSDE1-203ENST00000358528 ZNF287Q9HBT7 754 aa7.25□□□□□ -1.25
CSDE1-203ENST00000358528 SLAIN2Q9P270 581 aa7.25□□□□□ -1.25
CSDE1-203ENST00000358528 A0A1W2PQC6 194 aa7.25□□□□□ -1.25
CSDE1-203ENST00000358528 C6orf229H3BNL8 230 aa7.25□□□□□ -1.25
CSDE1-203ENST00000358528 ABCB4P21439 1286 aa7.25□□□□□ -1.25
CSDE1-203ENST00000358528 ZNF76P36508 570 aa7.25□□□□□ -1.25
CSDE1-203ENST00000358528 MAN2A1Q16706 1144 aa7.25□□□□□ -1.25
CSDE1-203ENST00000358528 IRF2BP1Q8IU81 584 aa7.25□□□□□ -1.25
CSDE1-203ENST00000358528 MYOCDQ8IZQ8 938 aa7.25□□□□□ -1.25
CSDE1-203ENST00000358528 RETREG2Q8NC44 543 aa7.25□□□□□ -1.25
CSDE1-203ENST00000358528 FAM84BQ96KN1 310 aaPredicted RBP7.25□□□□□ -1.25
CSDE1-203ENST00000358528 ZIM3Q96PE6 472 aa7.25□□□□□ -1.25
CSDE1-203ENST00000358528 BRIP1Q9BX63 1249 aa7.25□□□□□ -1.25
CSDE1-203ENST00000358528 PCDHA6Q9UN73 950 aa7.25□□□□□ -1.25
CSDE1-203ENST00000358528 PCDHA8Q9Y5H6 950 aa7.25□□□□□ -1.25
CSDE1-203ENST00000358528 CRYBG1Q9Y4K1 1723 aa7.25□□□□□ -1.25
CSDE1-203ENST00000358528 PDS5AQ29RF7 1337 aaKnown RBP7.25□□□□□ -1.25
CSDE1-203ENST00000358528 LOC102724159A0A0B4J2E5 919 aa7.25□□□□□ -1.25
CSDE1-203ENST00000358528 LOC102724428A0A0B4J2F2 783 aa7.25□□□□□ -1.25
CSDE1-203ENST00000358528 ANO9A1A5B4 782 aa7.25□□□□□ -1.25
CSDE1-203ENST00000358528 GCOM1H8Y6P7 765 aaPredicted RBP7.25□□□□□ -1.25
CSDE1-203ENST00000358528 MYZAPP0CAP1 466 aa7.25□□□□□ -1.25
CSDE1-203ENST00000358528 NR1D1P20393 614 aa7.25□□□□□ -1.25
CSDE1-203ENST00000358528 SIK1P57059 783 aa7.25□□□□□ -1.25
CSDE1-203ENST00000358528 PLS1Q14651 629 aa7.25□□□□□ -1.25
CSDE1-203ENST00000358528 PWP2Q15269 919 aaKnown RBP7.25□□□□□ -1.25
CSDE1-203ENST00000358528 UBE2SQ16763 222 aa7.25□□□□□ -1.25
CSDE1-203ENST00000358528 TTI2Q6NXR4 508 aa7.25□□□□□ -1.25
CSDE1-203ENST00000358528 VPS36Q86VN1 386 aa7.25□□□□□ -1.25
CSDE1-203ENST00000358528 CCDC25Q86WR0 208 aa7.25□□□□□ -1.25
CSDE1-203ENST00000358528 DNAJC7Q99615 494 aa7.25□□□□□ -1.25
CSDE1-203ENST00000358528 MINPP1Q9UNW1 487 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms