RNA–Protein interactions for RNA: ENST00000358170.6

CD46-205, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,371 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-205ENST00000358170 MOCS3O95396 460 aa9.21□□□□□ -0.94
CD46-205ENST00000358170 EEF1GP26641 437 aaKnown RBP9.21□□□□□ -0.94
CD46-205ENST00000358170 C2orf54Q08AI8 447 aa9.21□□□□□ -0.94
CD46-205ENST00000358170 GPS2Q13227 327 aa9.21□□□□□ -0.94
CD46-205ENST00000358170 USH1GQ495M9 461 aa9.21□□□□□ -0.94
CD46-205ENST00000358170 DNAAF5Q86Y56 855 aa9.21□□□□□ -0.94
CD46-205ENST00000358170 KIAA0895Q8NCT3 520 aa9.21□□□□□ -0.94
CD46-205ENST00000358170 CCSER1Q9C0I3 900 aa9.21□□□□□ -0.94
CD46-205ENST00000358170 BICDL2A1A5D9 508 aa9.2□□□□□ -0.94
CD46-205ENST00000358170 ANKRD65E5RJM6 399 aa9.2□□□□□ -0.94
CD46-205ENST00000358170 MEIS1O00470 390 aa9.2□□□□□ -0.94
CD46-205ENST00000358170 NCK2O43639 380 aa9.2□□□□□ -0.94
CD46-205ENST00000358170 PDHBP11177 359 aa9.2□□□□□ -0.94
CD46-205ENST00000358170 STAT3P40763 770 aa9.2□□□□□ -0.94
CD46-205ENST00000358170 SLC7A5Q01650 507 aa9.2□□□□□ -0.94
CD46-205ENST00000358170 TRIM14Q14142 442 aa9.2□□□□□ -0.94
CD46-205ENST00000358170 TMED8Q6PL24 325 aaPredicted RBP9.2□□□□□ -0.94
CD46-205ENST00000358170 HDXQ7Z353 690 aa9.2□□□□□ -0.94
CD46-205ENST00000358170 LARP4BQ92615 738 aaKnown RBP9.2□□□□□ -0.94
CD46-205ENST00000358170 DDX12PQ92771 950 aa9.2□□□□□ -0.94
CD46-205ENST00000358170 MMTAG2Q9BU76 263 aaKnown RBP9.2□□□□□ -0.94
CD46-205ENST00000358170 DBNDD1Q9H9R9 158 aa9.2□□□□□ -0.94
CD46-205ENST00000358170 KCNQ5Q9NR82 932 aa9.2□□□□□ -0.94
CD46-205ENST00000358170 ADAM21Q9UKJ8 722 aa9.2□□□□□ -0.94
CD46-205ENST00000358170 DAGLAQ9Y4D2 1042 aa9.2□□□□□ -0.94
CD46-205ENST00000358170 E9PMD0 336 aa9.2□□□□□ -0.94
CD46-205ENST00000358170 TOM1O60784 492 aa9.2□□□□□ -0.94
CD46-205ENST00000358170 EIF4A3P38919 411 aaKnown RBP9.2□□□□□ -0.94
CD46-205ENST00000358170 KRT83P78385 493 aa9.2□□□□□ -0.94
CD46-205ENST00000358170 DNAJC21Q5F1R6 531 aaKnown RBP9.2□□□□□ -0.94
CD46-205ENST00000358170 CT47A1Q5JQC4 288 aaPredicted RBP9.2□□□□□ -0.94
CD46-205ENST00000358170 CNNM4Q6P4Q7 775 aa9.2□□□□□ -0.94
CD46-205ENST00000358170 TBC1D16Q8TBP0 767 aa9.2□□□□□ -0.94
CD46-205ENST00000358170 ZNF622Q969S3 477 aaKnown RBP eCLIP9.2□□□□□ -0.942e-9■□□□□ 9.2
CD46-205ENST00000358170 DHTKD1Q96HY7 919 aaPredicted RBP9.2□□□□□ -0.94
CD46-205ENST00000358170 IFIH1Q9BYX4 1025 aaKnown RBP9.2□□□□□ -0.94
CD46-205ENST00000358170 THAP9Q9H5L6 903 aa9.2□□□□□ -0.94
CD46-205ENST00000358170 DDX4Q9NQI0 724 aaKnown RBP9.2□□□□□ -0.94
CD46-205ENST00000358170 CAPN11Q9UMQ6 739 aa9.2□□□□□ -0.94
CD46-205ENST00000358170 ITIH6Q6UXX5 1313 aa9.2□□□□□ -0.94
CD46-205ENST00000358170 CACNA1SQ13698 1873 aa9.2□□□□□ -0.94
CD46-205ENST00000358170 ECM29Q5VYK3 1845 aa9.2□□□□□ -0.94
CD46-205ENST00000358170 CAPN2P17655 700 aa9.2□□□□□ -0.94
CD46-205ENST00000358170 NFIAQ12857 509 aa9.2□□□□□ -0.94
CD46-205ENST00000358170 GRB10Q13322 594 aa9.2□□□□□ -0.94
CD46-205ENST00000358170 CASP8Q14790 479 aa9.2□□□□□ -0.94
CD46-205ENST00000358170 HERC4Q5GLZ8 1057 aaPredicted RBP9.2□□□□□ -0.94
CD46-205ENST00000358170 BEND6Q5SZJ8 279 aaPredicted RBP9.2□□□□□ -0.94
CD46-205ENST00000358170 MSL1Q68DK7 614 aa9.2□□□□□ -0.94
CD46-205ENST00000358170 NOC3LQ8WTT2 800 aaKnown RBP9.2□□□□□ -0.94
CD46-205ENST00000358170 HAUS4Q9H6D7 363 aa9.2□□□□□ -0.94
CD46-205ENST00000358170 KIAA1024Q9UPX6 916 aa9.2□□□□□ -0.94
CD46-205ENST00000358170 M0R2N6 131 aa9.19□□□□□ -0.94
CD46-205ENST00000358170 SRGNP10124 158 aa9.19□□□□□ -0.94
CD46-205ENST00000358170 EPS15P42566 896 aa9.19□□□□□ -0.94
CD46-205ENST00000358170 RHBDL3P58872 404 aa9.19□□□□□ -0.94
CD46-205ENST00000358170 RASSF7Q02833 373 aa9.19□□□□□ -0.94
CD46-205ENST00000358170 BRD3Q15059 726 aa9.19□□□□□ -0.94
CD46-205ENST00000358170 CCDC181Q5TID7 509 aa9.19□□□□□ -0.94
CD46-205ENST00000358170 C16orf86Q6ZW13 317 aa9.19□□□□□ -0.94
CD46-205ENST00000358170 ZFPM1Q8IX07 1006 aa9.19□□□□□ -0.94
CD46-205ENST00000358170 ADGRF4Q8IZF3 695 aa9.19□□□□□ -0.94
CD46-205ENST00000358170 ZNF507Q8TCN5 953 aa9.19□□□□□ -0.94
CD46-205ENST00000358170 RBM17Q96I25 401 aaKnown RBP9.19□□□□□ -0.94
CD46-205ENST00000358170 NDST4Q9H3R1 872 aa9.19□□□□□ -0.94
CD46-205ENST00000358170 PCDHA12Q9UN75 941 aa9.19□□□□□ -0.94
CD46-205ENST00000358170 ANKRD36CQ5JPF3 1778 aa9.19□□□□□ -0.94
CD46-205ENST00000358170 GPR75-ASB3A0A0A6YYF3 556 aa9.19□□□□□ -0.94
CD46-205ENST00000358170 TRIM37O94972 964 aa9.19□□□□□ -0.94
CD46-205ENST00000358170 PPP4CP60510 307 aa9.19□□□□□ -0.94
CD46-205ENST00000358170 CYP4A11Q02928 519 aa9.19□□□□□ -0.94
CD46-205ENST00000358170 GFPT1Q06210 699 aaPredicted RBP9.19□□□□□ -0.94
CD46-205ENST00000358170 EZH2Q15910 746 aaKnown RBP9.19□□□□□ -0.94
CD46-205ENST00000358170 WHAMMP3Q1A5X7 153 aa9.19□□□□□ -0.94
CD46-205ENST00000358170 FAM114A1Q8IWE2 563 aa9.19□□□□□ -0.94
CD46-205ENST00000358170 SPICE1Q8N0Z3 855 aa9.19□□□□□ -0.94
CD46-205ENST00000358170 SECISBP2LQ93073 1101 aaKnown RBP9.19□□□□□ -0.94
CD46-205ENST00000358170 PSTPIP2Q9H939 334 aa9.19□□□□□ -0.94
CD46-205ENST00000358170 MTMR4Q9NYA4 1195 aa9.19□□□□□ -0.94
CD46-205ENST00000358170 DDX25Q9UHL0 483 aaKnown RBP9.19□□□□□ -0.94
CD46-205ENST00000358170 STRCQ7RTU9 1775 aa9.19□□□□□ -0.94
CD46-205ENST00000358170 LRRC53A6NM62 1247 aa9.18□□□□□ -0.94
CD46-205ENST00000358170 PLCG2P16885 1265 aa9.18□□□□□ -0.94
CD46-205ENST00000358170 ATP2B4P23634 1241 aa9.18□□□□□ -0.94
CD46-205ENST00000358170 MAGEA1P43355 309 aa9.18□□□□□ -0.94
CD46-205ENST00000358170 KCNB1Q14721 858 aa9.18□□□□□ -0.94
CD46-205ENST00000358170 ECM1Q16610 540 aa9.18□□□□□ -0.94
CD46-205ENST00000358170 TCERG1LQ5VWI1 586 aa9.18□□□□□ -0.94
CD46-205ENST00000358170 LZTS2Q9BRK4 669 aa9.18□□□□□ -0.94
CD46-205ENST00000358170 SPZ1Q9BXG8 430 aa9.18□□□□□ -0.94
CD46-205ENST00000358170 BLOC1S4Q9NUP1 217 aa9.18□□□□□ -0.94
CD46-205ENST00000358170 FAM53CQ9NYF3 392 aa9.18□□□□□ -0.94
CD46-205ENST00000358170 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.18□□□□□ -0.94
CD46-205ENST00000358170 SERPINB13Q9UIV8 391 aa9.18□□□□□ -0.94
CD46-205ENST00000358170 PDS5AQ29RF7 1337 aaKnown RBP9.18□□□□□ -0.94
CD46-205ENST00000358170 RASSF10A6NK89 507 aa9.18□□□□□ -0.94
CD46-205ENST00000358170 LRRIQ3A6PVS8 624 aaPredicted RBP9.18□□□□□ -0.94
CD46-205ENST00000358170 PDE2AO00408 941 aaPredicted RBP9.18□□□□□ -0.94
CD46-205ENST00000358170 EIF3JO75822 258 aaKnown RBP9.18□□□□□ -0.94
CD46-205ENST00000358170 GDF11O95390 407 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms