RNA–Protein interactions for RNA: ENST00000356017.8

TRIM13-201, Transcript of tripartite motif containing 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRIM13, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-201ENST00000356017 SAFBQ15424 915 aaKnown RBP eCLIP17.8■□□□□ 0.44
TRIM13-201ENST00000356017 UBE2SQ16763 222 aa17.8■□□□□ 0.44
TRIM13-201ENST00000356017 MFSD14CQ5VZR4 134 aa17.8■□□□□ 0.44
TRIM13-201ENST00000356017 FBXO18Q8NFZ0 1043 aa17.8■□□□□ 0.44
TRIM13-201ENST00000356017 SHISA4Q96DD7 197 aa17.8■□□□□ 0.44
TRIM13-201ENST00000356017 PURBQ96QR8 312 aaKnown RBP17.8■□□□□ 0.44
TRIM13-201ENST00000356017 PXMP2Q9NR77 195 aa17.8■□□□□ 0.44
TRIM13-201ENST00000356017 KCNJ14Q9UNX9 436 aa17.8■□□□□ 0.44
TRIM13-201ENST00000356017 MMP1P03956 469 aa17.8■□□□□ 0.44
TRIM13-201ENST00000356017 HMGCRP04035 888 aa17.8■□□□□ 0.44
TRIM13-201ENST00000356017 ANP32AP39687 249 aaKnown RBP17.8■□□□□ 0.44
TRIM13-201ENST00000356017 CCL14Q16627 93 aa17.8■□□□□ 0.44
TRIM13-201ENST00000356017 KRT40Q6A162 431 aa17.8■□□□□ 0.44
TRIM13-201ENST00000356017 TRIB2Q92519 343 aa17.8■□□□□ 0.44
TRIM13-201ENST00000356017 FGD4Q96M96 766 aa17.8■□□□□ 0.44
TRIM13-201ENST00000356017 GJB4Q9NTQ9 266 aa17.8■□□□□ 0.44
TRIM13-201ENST00000356017 BIN2Q9UBW5 565 aaPredicted RBP17.8■□□□□ 0.44
TRIM13-201ENST00000356017 PCDHA6Q9UN73 950 aa17.8■□□□□ 0.44
TRIM13-201ENST00000356017 PCDHA8Q9Y5H6 950 aa17.8■□□□□ 0.44
TRIM13-201ENST00000356017 DOCK3Q8IZD9 2030 aa17.79■□□□□ 0.44
TRIM13-201ENST00000356017 SLC9C1Q4G0N8 1177 aa17.79■□□□□ 0.44
TRIM13-201ENST00000356017 MORC4Q8TE76 937 aa17.79■□□□□ 0.44
TRIM13-201ENST00000356017 FLRT1Q9NZU1 646 aa17.79■□□□□ 0.44
TRIM13-201ENST00000356017 CNPY2Q9Y2B0 182 aa17.79■□□□□ 0.44
TRIM13-201ENST00000356017 RBBP6Q7Z6E9 1792 aaKnown RBP17.78■□□□□ 0.44
TRIM13-201ENST00000356017 ASTN1O14525 1302 aa17.78■□□□□ 0.44
TRIM13-201ENST00000356017 IGHA2P01877 340 aa17.78■□□□□ 0.44
TRIM13-201ENST00000356017 ELNP15502 786 aa17.78■□□□□ 0.44
TRIM13-201ENST00000356017 EDNRBP24530 442 aa17.78■□□□□ 0.44
TRIM13-201ENST00000356017 KRT2P35908 639 aa17.78■□□□□ 0.44
TRIM13-201ENST00000356017 PDE4DQ08499 809 aa17.78■□□□□ 0.44
TRIM13-201ENST00000356017 NPY5RQ15761 445 aa17.78■□□□□ 0.44
TRIM13-201ENST00000356017 JAKMIP3Q5VZ66 844 aa17.78■□□□□ 0.44
TRIM13-201ENST00000356017 LARP1BQ659C4 914 aaKnown RBP17.78■□□□□ 0.44
TRIM13-201ENST00000356017 XRRA1Q6P2D8 792 aa17.78■□□□□ 0.44
TRIM13-201ENST00000356017 ARMCX2Q7L311 632 aa17.78■□□□□ 0.44
TRIM13-201ENST00000356017 PDCD2LQ9BRP1 358 aa17.78■□□□□ 0.44
TRIM13-201ENST00000356017 TSHZ2Q9NRE2 1034 aa17.78■□□□□ 0.44
TRIM13-201ENST00000356017 NRBP1Q9UHY1 535 aa17.78■□□□□ 0.44
TRIM13-201ENST00000356017 ZNFX1Q9P2E3 1918 aaKnown RBP17.77■□□□□ 0.44
TRIM13-201ENST00000356017 FRMPD4Q14CM0 1322 aa17.77■□□□□ 0.44
TRIM13-201ENST00000356017 RPTORQ8N122 1335 aa17.77■□□□□ 0.44
TRIM13-201ENST00000356017 H3BQV1 296 aa17.77■□□□□ 0.44
TRIM13-201ENST00000356017 NR3C2P08235 984 aa17.77■□□□□ 0.44
TRIM13-201ENST00000356017 PDIA4P13667 645 aaKnown RBP17.77■□□□□ 0.44
TRIM13-201ENST00000356017 EIF2AK2P19525 551 aaKnown RBP17.77■□□□□ 0.44
TRIM13-201ENST00000356017 PGM5Q15124 567 aa17.77■□□□□ 0.44
TRIM13-201ENST00000356017 STXBP2Q15833 593 aa17.77■□□□□ 0.44
TRIM13-201ENST00000356017 IFFO2Q5TF58 517 aa17.77■□□□□ 0.44
TRIM13-201ENST00000356017 ANO3Q9BYT9 981 aa17.77■□□□□ 0.44
TRIM13-201ENST00000356017 ABHD16BQ9H3Z7 469 aa17.77■□□□□ 0.44
TRIM13-201ENST00000356017 FOXD4L1Q9NU39 408 aa17.77■□□□□ 0.44
TRIM13-201ENST00000356017 M0R2N6 131 aa17.76■□□□□ 0.43
TRIM13-201ENST00000356017 CYP2C19P33261 490 aa17.76■□□□□ 0.43
TRIM13-201ENST00000356017 FOSBP53539 338 aa17.76■□□□□ 0.43
TRIM13-201ENST00000356017 UBXN2AP68543 259 aa17.76■□□□□ 0.43
TRIM13-201ENST00000356017 KRT25Q7Z3Z0 450 aa17.76■□□□□ 0.43
TRIM13-201ENST00000356017 DIS3L2Q8IYB7 885 aaKnown RBP17.76■□□□□ 0.43
TRIM13-201ENST00000356017 TMEM260Q9NX78 707 aa17.76■□□□□ 0.43
TRIM13-201ENST00000356017 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.76■□□□□ 0.43
TRIM13-201ENST00000356017 EIF3JO75822 258 aaKnown RBP17.76■□□□□ 0.43
TRIM13-201ENST00000356017 STAM2O75886 525 aa17.76■□□□□ 0.43
TRIM13-201ENST00000356017 CCND2P30279 289 aa17.76■□□□□ 0.43
TRIM13-201ENST00000356017 SREBF1P36956 1147 aa17.76■□□□□ 0.43
TRIM13-201ENST00000356017 GUCY1B3Q02153 619 aa17.76■□□□□ 0.43
TRIM13-201ENST00000356017 PCNX4Q63HM2 1172 aa17.76■□□□□ 0.43
TRIM13-201ENST00000356017 VSIG10LQ86VR7 867 aa17.76■□□□□ 0.43
TRIM13-201ENST00000356017 RASGRP4Q8TDF6 673 aa17.76■□□□□ 0.43
TRIM13-201ENST00000356017 MCOLN1Q9GZU1 580 aa17.76■□□□□ 0.43
TRIM13-201ENST00000356017 FOXP1Q9H334 677 aaPredicted RBP17.76■□□□□ 0.43
TRIM13-201ENST00000356017 CCDC194A0A1B0GVG4 234 aa17.75■□□□□ 0.43
TRIM13-201ENST00000356017 SNAI1O95863 264 aaPredicted RBP17.75■□□□□ 0.43
TRIM13-201ENST00000356017 INHAP05111 366 aa17.75■□□□□ 0.43
TRIM13-201ENST00000356017 MYCLP12524 364 aaPredicted RBP17.75■□□□□ 0.43
TRIM13-201ENST00000356017 GNL2Q13823 731 aaKnown RBP17.75■□□□□ 0.43
TRIM13-201ENST00000356017 VTA1Q9NP79 307 aa17.75■□□□□ 0.43
TRIM13-201ENST00000356017 BTBD18B2RXH4 712 aa17.74■□□□□ 0.43
TRIM13-201ENST00000356017 ADAMTS3O15072 1205 aa17.74■□□□□ 0.43
TRIM13-201ENST00000356017 PRKAR2AP13861 404 aaKnown RBP17.74■□□□□ 0.43
TRIM13-201ENST00000356017 CACNB2Q08289 660 aaPredicted RBP17.74■□□□□ 0.43
TRIM13-201ENST00000356017 ACVR2BQ13705 512 aa17.74■□□□□ 0.43
TRIM13-201ENST00000356017 NONOQ15233 471 aaKnown RBP eCLIP17.74■□□□□ 0.43
TRIM13-201ENST00000356017 MAP3K21Q5TCX8 1036 aa17.74■□□□□ 0.43
TRIM13-201ENST00000356017 OXER1Q8TDS5 423 aa17.74■□□□□ 0.43
TRIM13-201ENST00000356017 SH3TC2Q8TF17 1288 aa17.74■□□□□ 0.43
TRIM13-201ENST00000356017 DAXXQ9UER7 740 aaPredicted RBP17.74■□□□□ 0.43
TRIM13-201ENST00000356017 PLXNA1Q9UIW2 1896 aa17.73■□□□□ 0.43
TRIM13-201ENST00000356017 ARHGAP4P98171 946 aa17.73■□□□□ 0.43
TRIM13-201ENST00000356017 SPRYD3Q8NCJ5 442 aa17.73■□□□□ 0.43
TRIM13-201ENST00000356017 ARMC5Q96C12 935 aa17.73■□□□□ 0.43
TRIM13-201ENST00000356017 PGBD1Q96JS3 809 aa17.73■□□□□ 0.43
TRIM13-201ENST00000356017 CYP3A4P08684 503 aa17.72■□□□□ 0.43
TRIM13-201ENST00000356017 CYBAP13498 195 aa17.72■□□□□ 0.43
TRIM13-201ENST00000356017 SYT1P21579 422 aa17.72■□□□□ 0.43
TRIM13-201ENST00000356017 USP11P51784 963 aa17.72■□□□□ 0.43
TRIM13-201ENST00000356017 NR5A1Q13285 461 aa17.72■□□□□ 0.43
TRIM13-201ENST00000356017 TBCKQ8TEA7 893 aa17.72■□□□□ 0.43
TRIM13-201ENST00000356017 HMX1Q9NP08 348 aaPredicted RBP17.72■□□□□ 0.43
TRIM13-201ENST00000356017 ZHX1Q9UKY1 873 aaPredicted RBP17.72■□□□□ 0.43
TRIM13-201ENST00000356017 RBM19Q9Y4C8 960 aaKnown RBP17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms