RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 P4HA1P13674 534 aa13.81□□□□□ -0.2
SYNCRIP-201ENST00000355238 SLCO1A2P46721 670 aa13.81□□□□□ -0.2
SYNCRIP-201ENST00000355238 KIF23Q02241 960 aaPredicted RBP13.81□□□□□ -0.2
SYNCRIP-201ENST00000355238 SP4Q02446 784 aa13.81□□□□□ -0.2
SYNCRIP-201ENST00000355238 ZC3H12CQ9C0D7 883 aaKnown RBP13.81□□□□□ -0.2
SYNCRIP-201ENST00000355238 PCDHA12Q9UN75 941 aa13.81□□□□□ -0.2
SYNCRIP-201ENST00000355238 MYO1FO00160 1098 aa13.81□□□□□ -0.2
SYNCRIP-201ENST00000355238 EIF4A3P38919 411 aaKnown RBP13.81□□□□□ -0.2
SYNCRIP-201ENST00000355238 NLRP14Q86W24 1093 aa13.81□□□□□ -0.2
SYNCRIP-201ENST00000355238 GDAP1Q8TB36 358 aa13.81□□□□□ -0.2
SYNCRIP-201ENST00000355238 PITPNM3Q9BZ71 974 aa13.81□□□□□ -0.2
SYNCRIP-201ENST00000355238 ZNF219Q9P2Y4 722 aaPredicted RBP13.81□□□□□ -0.2
SYNCRIP-201ENST00000355238 PZPP20742 1482 aa13.81□□□□□ -0.2
SYNCRIP-201ENST00000355238 GRIN2AQ12879 1464 aa13.81□□□□□ -0.2
SYNCRIP-201ENST00000355238 BIN2Q9UBW5 565 aaPredicted RBP13.81□□□□□ -0.2
SYNCRIP-201ENST00000355238 MT-ND3P03897 115 aa13.81□□□□□ -0.2
SYNCRIP-201ENST00000355238 AOC3Q16853 763 aa13.81□□□□□ -0.2
SYNCRIP-201ENST00000355238 PARP10Q53GL7 1025 aa13.81□□□□□ -0.2
SYNCRIP-201ENST00000355238 CCDC92Q53HC0 331 aaPredicted RBP13.81□□□□□ -0.2
SYNCRIP-201ENST00000355238 DIS3Q9Y2L1 958 aaKnown RBP13.81□□□□□ -0.2
SYNCRIP-201ENST00000355238 TRPM2O94759 1503 aa13.8□□□□□ -0.2
SYNCRIP-201ENST00000355238 RANBP1P43487 201 aa13.8□□□□□ -0.2
SYNCRIP-201ENST00000355238 NSFP46459 744 aaKnown RBP13.8□□□□□ -0.2
SYNCRIP-201ENST00000355238 KIF11P52732 1056 aa13.8□□□□□ -0.2
SYNCRIP-201ENST00000355238 TFAP4Q01664 338 aa13.8□□□□□ -0.2
SYNCRIP-201ENST00000355238 ARID5BQ14865 1188 aa13.8□□□□□ -0.2
SYNCRIP-201ENST00000355238 SYT2Q8N9I0 419 aaPredicted RBP13.8□□□□□ -0.2
SYNCRIP-201ENST00000355238 BPIFB4P59827 614 aa13.8□□□□□ -0.2
SYNCRIP-201ENST00000355238 STX1BP61266 288 aa13.8□□□□□ -0.2
SYNCRIP-201ENST00000355238 CCDC117Q8IWD4 279 aaPredicted RBP13.8□□□□□ -0.2
SYNCRIP-201ENST00000355238 STK17AQ9UEE5 414 aa13.8□□□□□ -0.2
SYNCRIP-201ENST00000355238 GSTA1P08263 222 aa13.8□□□□□ -0.2
SYNCRIP-201ENST00000355238 GSTA2P09210 222 aa13.8□□□□□ -0.2
SYNCRIP-201ENST00000355238 POLR2BP30876 1174 aaKnown RBP13.8□□□□□ -0.2
SYNCRIP-201ENST00000355238 GRAMD1BQ3KR37 738 aa13.8□□□□□ -0.2
SYNCRIP-201ENST00000355238 RINT1Q6NUQ1 792 aa13.8□□□□□ -0.2
SYNCRIP-201ENST00000355238 KSR1Q8IVT5 923 aa13.8□□□□□ -0.2
SYNCRIP-201ENST00000355238 IFNL3Q8IZI9 196 aa13.8□□□□□ -0.2
SYNCRIP-201ENST00000355238 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.8□□□□□ -0.26e-7■□□□□ 11.3
SYNCRIP-201ENST00000355238 ORC6Q9Y5N6 252 aa13.8□□□□□ -0.2
SYNCRIP-201ENST00000355238 FMNL1O95466 1100 aaPredicted RBP13.8□□□□□ -0.2
SYNCRIP-201ENST00000355238 FGAP02671 866 aa13.8□□□□□ -0.2
SYNCRIP-201ENST00000355238 PDE1BQ01064 536 aa13.8□□□□□ -0.2
SYNCRIP-201ENST00000355238 MYO1EQ12965 1108 aa13.8□□□□□ -0.2
SYNCRIP-201ENST00000355238 PEG3Q9GZU2 1588 aa13.8□□□□□ -0.2
SYNCRIP-201ENST00000355238 ARHGEF10LQ9HCE6 1279 aa13.8□□□□□ -0.2
SYNCRIP-201ENST00000355238 ANLNQ9NQW6 1124 aa13.8□□□□□ -0.2
SYNCRIP-201ENST00000355238 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.8□□□□□ -0.2
SYNCRIP-201ENST00000355238 KDRP35968 1356 aa13.8□□□□□ -0.2
SYNCRIP-201ENST00000355238 A2MP01023 1474 aa13.8□□□□□ -0.2
SYNCRIP-201ENST00000355238 YTHDC2Q9H6S0 1430 aaKnown RBP13.8□□□□□ -0.2
SYNCRIP-201ENST00000355238 EXOC1LA0A1B0GW35 172 aa13.8□□□□□ -0.2
SYNCRIP-201ENST00000355238 CYP4F22Q6NT55 531 aa13.8□□□□□ -0.2
SYNCRIP-201ENST00000355238 AATFQ9NY61 560 aaKnown RBP eCLIP13.8□□□□□ -0.2
SYNCRIP-201ENST00000355238 CUL4BQ13620 913 aa13.79□□□□□ -0.2
SYNCRIP-201ENST00000355238 GNPTABQ3T906 1256 aa13.79□□□□□ -0.2
SYNCRIP-201ENST00000355238 ATG16L1Q676U5 607 aa13.79□□□□□ -0.2
SYNCRIP-201ENST00000355238 TOGARAM2Q6ZUX3 1019 aa13.79□□□□□ -0.2
SYNCRIP-201ENST00000355238 PDZD4Q76G19 769 aaPredicted RBP13.79□□□□□ -0.2
SYNCRIP-201ENST00000355238 RUBCNQ92622 972 aa13.79□□□□□ -0.2
SYNCRIP-201ENST00000355238 SH3TC1Q8TE82 1336 aa13.79□□□□□ -0.2
SYNCRIP-201ENST00000355238 GYG2O15488 501 aa13.79□□□□□ -0.2
SYNCRIP-201ENST00000355238 AFPP02771 609 aaKnown RBP13.79□□□□□ -0.2
SYNCRIP-201ENST00000355238 PCP11498 1178 aaKnown RBP13.79□□□□□ -0.2
SYNCRIP-201ENST00000355238 SLC1A4P43007 532 aa13.79□□□□□ -0.2
SYNCRIP-201ENST00000355238 PPP2R2AP63151 447 aa13.79□□□□□ -0.2
SYNCRIP-201ENST00000355238 SPARCL1Q14515 664 aa13.79□□□□□ -0.2
SYNCRIP-201ENST00000355238 PTPN21Q16825 1174 aa13.79□□□□□ -0.2
SYNCRIP-201ENST00000355238 TPH2Q8IWU9 490 aa13.79□□□□□ -0.2
SYNCRIP-201ENST00000355238 GFM2Q969S9 779 aaKnown RBP13.79□□□□□ -0.2
SYNCRIP-201ENST00000355238 ZCCHC17Q9NP64 241 aaKnown RBP13.79□□□□□ -0.2
SYNCRIP-201ENST00000355238 TMOD4Q9NZQ9 345 aa13.79□□□□□ -0.2
SYNCRIP-201ENST00000355238 PODXLO00592 558 aa13.79□□□□□ -0.2
SYNCRIP-201ENST00000355238 ADCY1Q08828 1119 aa13.79□□□□□ -0.2
SYNCRIP-201ENST00000355238 PPP1R2P3Q6NXS1 205 aa13.79□□□□□ -0.2
SYNCRIP-201ENST00000355238 TRAIPQ9BWF2 469 aa13.79□□□□□ -0.2
SYNCRIP-201ENST00000355238 RNF26Q9BY78 433 aaPredicted RBP13.79□□□□□ -0.2
SYNCRIP-201ENST00000355238 MAD1L1Q9Y6D9 718 aa13.79□□□□□ -0.2
SYNCRIP-201ENST00000355238 TNKSO95271 1327 aa13.79□□□□□ -0.2
SYNCRIP-201ENST00000355238 DENND4BO75064 1496 aaPredicted RBP13.79□□□□□ -0.2
SYNCRIP-201ENST00000355238 ATP1A3P13637 1013 aa13.79□□□□□ -0.2
SYNCRIP-201ENST00000355238 FKBP3Q00688 224 aaKnown RBP13.79□□□□□ -0.2
SYNCRIP-201ENST00000355238 ANKRD7Q92527 254 aa13.79□□□□□ -0.2
SYNCRIP-201ENST00000355238 FGD4Q96M96 766 aa13.79□□□□□ -0.2
SYNCRIP-201ENST00000355238 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.79□□□□□ -0.2
SYNCRIP-201ENST00000355238 RAPGEF6Q8TEU7 1601 aa13.79□□□□□ -0.2
SYNCRIP-201ENST00000355238 SOS2Q07890 1332 aaPredicted RBP13.79□□□□□ -0.2
SYNCRIP-201ENST00000355238 A0A087WWV3 80 aa13.79□□□□□ -0.2
SYNCRIP-201ENST00000355238 ARHGAP10A1A4S6 786 aa13.79□□□□□ -0.2
SYNCRIP-201ENST00000355238 SGK1O00141 431 aa13.79□□□□□ -0.2
SYNCRIP-201ENST00000355238 KAZNQ674X7 775 aa13.79□□□□□ -0.2
SYNCRIP-201ENST00000355238 CCDC124Q96CT7 223 aaKnown RBP13.79□□□□□ -0.2
SYNCRIP-201ENST00000355238 MFAP3P55082 362 aa13.78□□□□□ -0.2
SYNCRIP-201ENST00000355238 MYL7Q01449 175 aa13.78□□□□□ -0.2
SYNCRIP-201ENST00000355238 BEND6Q5SZJ8 279 aaPredicted RBP13.78□□□□□ -0.2
SYNCRIP-201ENST00000355238 RSPH3Q86UC2 560 aa13.78□□□□□ -0.2
SYNCRIP-201ENST00000355238 PPM1KQ8N3J5 372 aa13.78□□□□□ -0.2
SYNCRIP-201ENST00000355238 CSRNP1Q96S65 589 aa13.78□□□□□ -0.2
SYNCRIP-201ENST00000355238 NEURL1BA8MQ27 555 aa13.78□□□□□ -0.2
SYNCRIP-201ENST00000355238 IPO5O00410 1097 aaKnown RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms