RNA–Protein interactions for RNA: ENST00000355119.8

LIMS2-202, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,045 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-202ENST00000355119 KIAA0895Q8NCT3 520 aa24.33■■□□□ 1.49
LIMS2-202ENST00000355119 SNX29Q8TEQ0 813 aa24.33■■□□□ 1.49
LIMS2-202ENST00000355119 DHX36Q9H2U1 1008 aaKnown RBP24.33■■□□□ 1.49
LIMS2-202ENST00000355119 PRDM10Q9NQV6 1147 aa24.33■■□□□ 1.49
LIMS2-202ENST00000355119 USP17L10C9JJH3 530 aa24.32■■□□□ 1.48
LIMS2-202ENST00000355119 NDUFA10O95299 355 aa24.32■■□□□ 1.48
LIMS2-202ENST00000355119 ZSCAN20P17040 1043 aaPredicted RBP24.32■■□□□ 1.48
LIMS2-202ENST00000355119 NFIAQ12857 509 aa24.32■■□□□ 1.48
LIMS2-202ENST00000355119 CEP112Q8N8E3 955 aa24.32■■□□□ 1.48
LIMS2-202ENST00000355119 SLF1Q9BQI6 1058 aa24.32■■□□□ 1.48
LIMS2-202ENST00000355119 DDX25Q9UHL0 483 aaKnown RBP24.32■■□□□ 1.48
LIMS2-202ENST00000355119 MYH4Q9Y623 1939 aa24.32■■□□□ 1.48
LIMS2-202ENST00000355119 FGFR1OPO95684 399 aaKnown RBP24.32■■□□□ 1.48
LIMS2-202ENST00000355119 TBC1D8BQ0IIM8 1120 aa24.32■■□□□ 1.48
LIMS2-202ENST00000355119 TEX35Q5T0J7 233 aa24.32■■□□□ 1.48
LIMS2-202ENST00000355119 SLC35F6Q8N357 371 aa24.32■■□□□ 1.48
LIMS2-202ENST00000355119 DCAF4Q8WV16 495 aa24.32■■□□□ 1.48
LIMS2-202ENST00000355119 IQCDQ96DY2 449 aa24.32■■□□□ 1.48
LIMS2-202ENST00000355119 CHP1Q99653 195 aa24.32■■□□□ 1.48
LIMS2-202ENST00000355119 PSTPIP2Q9H939 334 aa24.32■■□□□ 1.48
LIMS2-202ENST00000355119 SLC16A2P36021 539 aa24.31■■□□□ 1.48
LIMS2-202ENST00000355119 HDLBPQ00341 1268 aaKnown RBP24.31■■□□□ 1.48
LIMS2-202ENST00000355119 KIF4BQ2VIQ3 1234 aa24.31■■□□□ 1.48
LIMS2-202ENST00000355119 KCTD1Q719H9 257 aa24.31■■□□□ 1.48
LIMS2-202ENST00000355119 SRGAP1Q7Z6B7 1085 aa24.31■■□□□ 1.48
LIMS2-202ENST00000355119 ZSCAN29Q8IWY8 852 aaPredicted RBP24.31■■□□□ 1.48
LIMS2-202ENST00000355119 MKL1Q969V6 931 aa24.31■■□□□ 1.48
LIMS2-202ENST00000355119 NAPGQ99747 312 aaPredicted RBP24.31■■□□□ 1.48
LIMS2-202ENST00000355119 NOC4LQ9BVI4 516 aaKnown RBP24.31■■□□□ 1.48
LIMS2-202ENST00000355119 SEMA6BQ9H3T3 888 aa24.31■■□□□ 1.48
LIMS2-202ENST00000355119 SLC39A2Q9NP94 309 aa24.31■■□□□ 1.48
LIMS2-202ENST00000355119 POTEMA6NI47 508 aa24.3■■□□□ 1.48
LIMS2-202ENST00000355119 MMP10P09238 476 aa24.3■■□□□ 1.48
LIMS2-202ENST00000355119 TUBB4BP68371 445 aa24.3■■□□□ 1.48
LIMS2-202ENST00000355119 PSMD2Q13200 908 aa24.3■■□□□ 1.48
LIMS2-202ENST00000355119 MEA1Q16626 185 aa24.3■■□□□ 1.48
LIMS2-202ENST00000355119 FKBP15Q5T1M5 1219 aa24.3■■□□□ 1.48
LIMS2-202ENST00000355119 TTYH3Q9C0H2 523 aa24.3■■□□□ 1.48
LIMS2-202ENST00000355119 NYAP2Q9P242 653 aa24.3■■□□□ 1.48
LIMS2-202ENST00000355119 GABPB1Q06547 395 aaPredicted RBP24.3■■□□□ 1.48
LIMS2-202ENST00000355119 GUF1Q8N442 669 aaKnown RBP24.3■■□□□ 1.48
LIMS2-202ENST00000355119 ERGIC2Q96RQ1 377 aa24.3■■□□□ 1.48
LIMS2-202ENST00000355119 ZNHIT6Q9NWK9 470 aaKnown RBP24.3■■□□□ 1.48
LIMS2-202ENST00000355119 ATF5Q9Y2D1 282 aaPredicted RBP24.3■■□□□ 1.48
LIMS2-202ENST00000355119 PLSCR1O15162 318 aa24.29■■□□□ 1.48
LIMS2-202ENST00000355119 SLC26A4O43511 780 aa24.29■■□□□ 1.48
LIMS2-202ENST00000355119 MARCH6O60337 910 aa24.29■■□□□ 1.48
LIMS2-202ENST00000355119 ZBED6P86452 979 aa24.29■■□□□ 1.48
LIMS2-202ENST00000355119 DMTNQ08495 405 aa24.29■■□□□ 1.48
LIMS2-202ENST00000355119 SEPT2Q15019 361 aa24.29■■□□□ 1.48
LIMS2-202ENST00000355119 FIGNQ5HY92 759 aa24.29■■□□□ 1.48
LIMS2-202ENST00000355119 UTP14CQ5TAP6 766 aaKnown RBP24.29■■□□□ 1.48
LIMS2-202ENST00000355119 ZFPM1Q8IX07 1006 aa24.29■■□□□ 1.48
LIMS2-202ENST00000355119 DBNDD1Q9H9R9 158 aa24.29■■□□□ 1.48
LIMS2-202ENST00000355119 ATP8B1O43520 1251 aa24.28■■□□□ 1.48
LIMS2-202ENST00000355119 ZRANB2O95218 330 aaKnown RBP eCLIP24.28■■□□□ 1.48
LIMS2-202ENST00000355119 TRIM21P19474 475 aaKnown RBP24.28■■□□□ 1.48
LIMS2-202ENST00000355119 MIIPQ5JXC2 388 aa24.28■■□□□ 1.48
LIMS2-202ENST00000355119 STRIP1Q5VSL9 837 aa24.28■■□□□ 1.48
LIMS2-202ENST00000355119 HPS3Q969F9 1004 aa24.28■■□□□ 1.48
LIMS2-202ENST00000355119 IDI2Q9BXS1 227 aa24.28■■□□□ 1.48
LIMS2-202ENST00000355119 DNAJC18Q9H819 358 aa24.28■■□□□ 1.48
LIMS2-202ENST00000355119 KANSL2Q9H9L4 492 aa24.28■■□□□ 1.48
LIMS2-202ENST00000355119 PI4KBQ9UBF8 816 aa24.28■■□□□ 1.48
LIMS2-202ENST00000355119 REXO2Q9Y3B8 237 aaKnown RBP24.28■■□□□ 1.48
LIMS2-202ENST00000355119 ABCB11O95342 1321 aa24.28■■□□□ 1.48
LIMS2-202ENST00000355119 A0A1W2PQJ5 194 aa24.28■■□□□ 1.48
LIMS2-202ENST00000355119 NPM3O75607 178 aaKnown RBP24.28■■□□□ 1.48
LIMS2-202ENST00000355119 CHMP4BP1P59074 171 aa24.28■■□□□ 1.48
LIMS2-202ENST00000355119 KRT83P78385 493 aa24.28■■□□□ 1.48
LIMS2-202ENST00000355119 WDR59Q6PJI9 974 aa24.28■■□□□ 1.48
LIMS2-202ENST00000355119 FOXR2Q6PJQ5 311 aa24.28■■□□□ 1.48
LIMS2-202ENST00000355119 ZNF662Q6ZS27 426 aa24.28■■□□□ 1.48
LIMS2-202ENST00000355119 DYMQ7RTS9 669 aa24.28■■□□□ 1.48
LIMS2-202ENST00000355119 HAS1Q92839 578 aa24.28■■□□□ 1.48
LIMS2-202ENST00000355119 ZNF622Q969S3 477 aaKnown RBP eCLIP24.28■■□□□ 1.48
LIMS2-202ENST00000355119 PCMTD1Q96MG8 357 aaPredicted RBP24.28■■□□□ 1.48
LIMS2-202ENST00000355119 NUDT12Q9BQG2 462 aa24.28■■□□□ 1.48
LIMS2-202ENST00000355119 HAUS4Q9H6D7 363 aa24.28■■□□□ 1.48
LIMS2-202ENST00000355119 KDM3AQ9Y4C1 1321 aa24.28■■□□□ 1.48
LIMS2-202ENST00000355119 CYLC1P35663 651 aaPredicted RBP24.27■■□□□ 1.48
LIMS2-202ENST00000355119 LRRC63Q05C16 580 aa24.27■■□□□ 1.48
LIMS2-202ENST00000355119 CERKLQ49MI3 558 aaPredicted RBP24.27■■□□□ 1.48
LIMS2-202ENST00000355119 TRIM34Q9BYJ4 488 aa24.27■■□□□ 1.48
LIMS2-202ENST00000355119 FHOD1Q9Y613 1164 aa24.27■■□□□ 1.48
LIMS2-202ENST00000355119 SIPA1L1O43166 1804 aa24.27■■□□□ 1.48
LIMS2-202ENST00000355119 RASSF10A6NK89 507 aa24.27■■□□□ 1.48
LIMS2-202ENST00000355119 EEF2P13639 858 aaKnown RBP24.27■■□□□ 1.48
LIMS2-202ENST00000355119 QRICH1Q2TAL8 776 aa24.27■■□□□ 1.48
LIMS2-202ENST00000355119 HYIQ5T013 277 aa24.27■■□□□ 1.48
LIMS2-202ENST00000355119 SLFN13Q68D06 897 aa24.27■■□□□ 1.48
LIMS2-202ENST00000355119 PNMA6AP0CW24 399 aaPredicted RBP24.26■■□□□ 1.47
LIMS2-202ENST00000355119 SLC1A4P43007 532 aa24.26■■□□□ 1.47
LIMS2-202ENST00000355119 WHAMMP3Q1A5X7 153 aa24.26■■□□□ 1.47
LIMS2-202ENST00000355119 KIAA0825Q8IV33 1275 aa24.26■■□□□ 1.47
LIMS2-202ENST00000355119 CCDC170Q8IYT3 715 aa24.26■■□□□ 1.47
LIMS2-202ENST00000355119 DDX12PQ92771 950 aa24.26■■□□□ 1.47
LIMS2-202ENST00000355119 ZMYND15Q9H091 742 aa24.26■■□□□ 1.47
LIMS2-202ENST00000355119 NT5C3AQ9H0P0 336 aa24.26■■□□□ 1.47
LIMS2-202ENST00000355119 PCDHA12Q9UN75 941 aa24.26■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms