RNA–Protein interactions for RNA: ENST00000354833.7

SERF1A-202, Transcript of small EDRK-rich factor 1A, humanhuman

TSL 1 (best) BASIC

Gene SERF1A, Length 1,889 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1A-202ENST00000354833 PICK1Q9NRD5 415 aa27.37■■□□□ 1.97
SERF1A-202ENST00000354833 EMILIN3Q9NT22 766 aa27.37■■□□□ 1.97
SERF1A-202ENST00000354833 POTEMA6NI47 508 aa27.36■■□□□ 1.97
SERF1A-202ENST00000354833 RPN1P04843 607 aaKnown RBP27.36■■□□□ 1.97
SERF1A-202ENST00000354833 TPM3P06753 285 aa27.36■■□□□ 1.97
SERF1A-202ENST00000354833 Q4G0T1 1027 aa27.36■■□□□ 1.97
SERF1A-202ENST00000354833 KLRG1Q96E93 195 aa27.36■■□□□ 1.97
SERF1A-202ENST00000354833 PCDHA12Q9UN75 941 aa27.36■■□□□ 1.97
SERF1A-202ENST00000354833 GCOM1H8Y6P7 765 aaPredicted RBP27.36■■□□□ 1.97
SERF1A-202ENST00000354833 CFBP00751 764 aa27.36■■□□□ 1.97
SERF1A-202ENST00000354833 ICAM1P05362 532 aa27.36■■□□□ 1.97
SERF1A-202ENST00000354833 POLR2MP0CAP2 368 aa27.36■■□□□ 1.97
SERF1A-202ENST00000354833 VCAM1P19320 739 aa27.36■■□□□ 1.97
SERF1A-202ENST00000354833 CIITAP33076 1130 aa27.36■■□□□ 1.97
SERF1A-202ENST00000354833 SPP2Q13103 211 aa27.36■■□□□ 1.97
SERF1A-202ENST00000354833 DGKZQ13574 1117 aa27.36■■□□□ 1.97
SERF1A-202ENST00000354833 SUPT20HL1Q3ZLR7 823 aa27.36■■□□□ 1.97
SERF1A-202ENST00000354833 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP27.36■■□□□ 1.97
SERF1A-202ENST00000354833 SSC5DA1L4H1 1573 aa27.35■■□□□ 1.97
SERF1A-202ENST00000354833 CYP3A4P08684 503 aa27.35■■□□□ 1.97
SERF1A-202ENST00000354833 BACE1P56817 501 aa27.35■■□□□ 1.97
SERF1A-202ENST00000354833 GRB10Q13322 594 aa27.35■■□□□ 1.97
SERF1A-202ENST00000354833 KRT79Q5XKE5 535 aa27.35■■□□□ 1.97
SERF1A-202ENST00000354833 SLFN12Q8IYM2 578 aa27.35■■□□□ 1.97
SERF1A-202ENST00000354833 ZNF280CQ8ND82 737 aa27.35■■□□□ 1.97
SERF1A-202ENST00000354833 ZNF536O15090 1300 aa27.34■■□□□ 1.97
SERF1A-202ENST00000354833 FCHSD1Q86WN1 690 aa27.34■■□□□ 1.97
SERF1A-202ENST00000354833 TBC1D5Q92609 795 aa27.34■■□□□ 1.97
SERF1A-202ENST00000354833 TANGO6Q9C0B7 1094 aa27.34■■□□□ 1.97
SERF1A-202ENST00000354833 FANCLQ9NW38 375 aa27.34■■□□□ 1.97
SERF1A-202ENST00000354833 STK17AQ9UEE5 414 aa27.34■■□□□ 1.97
SERF1A-202ENST00000354833 FZD1Q9UP38 647 aa27.34■■□□□ 1.97
SERF1A-202ENST00000354833 TBX3O15119 743 aa27.34■■□□□ 1.97
SERF1A-202ENST00000354833 CD44P16070 742 aaKnown RBP27.34■■□□□ 1.97
SERF1A-202ENST00000354833 SEMA3FQ13275 785 aa27.34■■□□□ 1.97
SERF1A-202ENST00000354833 C9orf131Q5VYM1 1079 aa27.34■■□□□ 1.97
SERF1A-202ENST00000354833 SNX29Q8TEQ0 813 aa27.34■■□□□ 1.97
SERF1A-202ENST00000354833 PNMA5Q96PV4 448 aa27.34■■□□□ 1.97
SERF1A-202ENST00000354833 CCPG1Q9ULG6 757 aa27.34■■□□□ 1.97
SERF1A-202ENST00000354833 PPP1R3GB7ZBB8 358 aa27.33■■□□□ 1.97
SERF1A-202ENST00000354833 KCNB1Q14721 858 aa27.33■■□□□ 1.97
SERF1A-202ENST00000354833 PRR16Q569H4 304 aa27.33■■□□□ 1.97
SERF1A-202ENST00000354833 ZNF658Q5TYW1 1059 aaPredicted RBP27.33■■□□□ 1.97
SERF1A-202ENST00000354833 ETNPPLQ8TBG4 499 aa27.33■■□□□ 1.97
SERF1A-202ENST00000354833 GJA10Q969M2 543 aa27.33■■□□□ 1.97
SERF1A-202ENST00000354833 LENG9Q96B70 501 aa27.33■■□□□ 1.97
SERF1A-202ENST00000354833 AGBL1Q96MI9 1066 aa27.33■■□□□ 1.97
SERF1A-202ENST00000354833 MED15Q96RN5 788 aa27.33■■□□□ 1.97
SERF1A-202ENST00000354833 FAM86B1E9PN63 330 aa27.32■■□□□ 1.96
SERF1A-202ENST00000354833 FAM86B2P0C5J1 330 aa27.32■■□□□ 1.96
SERF1A-202ENST00000354833 ATP1A3P13637 1013 aa27.32■■□□□ 1.96
SERF1A-202ENST00000354833 FANCCQ00597 558 aa27.32■■□□□ 1.96
SERF1A-202ENST00000354833 SMYD4Q8IYR2 804 aaPredicted RBP27.32■■□□□ 1.96
SERF1A-202ENST00000354833 CDK5RAP3Q96JB5 506 aa27.32■■□□□ 1.96
SERF1A-202ENST00000354833 RPAP3Q9H6T3 665 aaPredicted RBP27.32■■□□□ 1.96
SERF1A-202ENST00000354833 SLC38A10Q9HBR0 1119 aa27.32■■□□□ 1.96
SERF1A-202ENST00000354833 IFNKQ9P0W0 207 aa27.32■■□□□ 1.96
SERF1A-202ENST00000354833 PPP1R9AQ9ULJ8 1098 aa27.32■■□□□ 1.96
SERF1A-202ENST00000354833 NFE2L3Q9Y4A8 694 aa27.32■■□□□ 1.96
SERF1A-202ENST00000354833 FLOT1O75955 427 aa27.32■■□□□ 1.96
SERF1A-202ENST00000354833 AMPD3Q01432 767 aa27.32■■□□□ 1.96
SERF1A-202ENST00000354833 NOL9Q5SY16 702 aaKnown RBP27.32■■□□□ 1.96
SERF1A-202ENST00000354833 TRMT44Q8IYL2 757 aaKnown RBP27.32■■□□□ 1.96
SERF1A-202ENST00000354833 C7orf25Q9BPX7 421 aa27.32■■□□□ 1.96
SERF1A-202ENST00000354833 KLRC4O43908 158 aa27.31■■□□□ 1.96
SERF1A-202ENST00000354833 TMEM119Q4V9L6 283 aa27.31■■□□□ 1.96
SERF1A-202ENST00000354833 ZNF830Q96NB3 372 aaPredicted RBP27.31■■□□□ 1.96
SERF1A-202ENST00000354833 NUDT12Q9BQG2 462 aa27.31■■□□□ 1.96
SERF1A-202ENST00000354833 XPO4Q9C0E2 1151 aaKnown RBP27.31■■□□□ 1.96
SERF1A-202ENST00000354833 BLOC1S4Q9NUP1 217 aa27.31■■□□□ 1.96
SERF1A-202ENST00000354833 ZHX2Q9Y6X8 837 aa27.31■■□□□ 1.96
SERF1A-202ENST00000354833 SMCHD1A6NHR9 2005 aa27.3■■□□□ 1.96
SERF1A-202ENST00000354833 CCDC186Q7Z3E2 898 aa27.3■■□□□ 1.96
SERF1A-202ENST00000354833 C12orf42Q96LP6 360 aa27.3■■□□□ 1.96
SERF1A-202ENST00000354833 FAM20AQ96MK3 541 aa27.3■■□□□ 1.96
SERF1A-202ENST00000354833 TRIM9Q9C026 710 aa27.3■■□□□ 1.96
SERF1A-202ENST00000354833 EHMT1Q9H9B1 1298 aa27.3■■□□□ 1.96
SERF1A-202ENST00000354833 RTN4Q9NQC3 1192 aaKnown RBP27.3■■□□□ 1.96
SERF1A-202ENST00000354833 NRBP1Q9UHY1 535 aa27.3■■□□□ 1.96
SERF1A-202ENST00000354833 KLHL10Q6JEL2 608 aa27.3■■□□□ 1.96
SERF1A-202ENST00000354833 C19orf81C9J6K1 198 aa27.29■■□□□ 1.96
SERF1A-202ENST00000354833 SLC26A4O43511 780 aa27.29■■□□□ 1.96
SERF1A-202ENST00000354833 RHOBTB3O94955 611 aa27.29■■□□□ 1.96
SERF1A-202ENST00000354833 ZNF18P17022 549 aa27.29■■□□□ 1.96
SERF1A-202ENST00000354833 CLCN1P35523 988 aa27.29■■□□□ 1.96
SERF1A-202ENST00000354833 KMT5BQ4FZB7 885 aa27.29■■□□□ 1.96
SERF1A-202ENST00000354833 HYIQ5T013 277 aa27.29■■□□□ 1.96
SERF1A-202ENST00000354833 SV2BQ7L1I2 683 aa27.29■■□□□ 1.96
SERF1A-202ENST00000354833 DDX55Q8NHQ9 600 aaKnown RBP eCLIP27.29■■□□□ 1.96
SERF1A-202ENST00000354833 DCPSQ96C86 337 aaKnown RBP27.29■■□□□ 1.96
SERF1A-202ENST00000354833 SYNRGQ9UMZ2 1314 aa27.29■■□□□ 1.96
SERF1A-202ENST00000354833 FDX1P10109 184 aa27.28■■□□□ 1.96
SERF1A-202ENST00000354833 PTGS1P23219 599 aa27.28■■□□□ 1.96
SERF1A-202ENST00000354833 ZNF76P36508 570 aa27.28■■□□□ 1.96
SERF1A-202ENST00000354833 HSD17B4P51659 736 aa27.28■■□□□ 1.96
SERF1A-202ENST00000354833 SPATA1Q5VX52 437 aa27.28■■□□□ 1.96
SERF1A-202ENST00000354833 LARP4BQ92615 738 aaKnown RBP27.28■■□□□ 1.96
SERF1A-202ENST00000354833 PNMA2Q9UL42 364 aa27.28■■□□□ 1.96
SERF1A-202ENST00000354833 KDM3AQ9Y4C1 1321 aa27.28■■□□□ 1.96
SERF1A-202ENST00000354833 USP2O75604 605 aaPredicted RBP27.27■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms