RNA–Protein interactions for RNA: ENST00000349379.5

SNX3-202, Transcript of sorting nexin 3, humanhuman

TSL 2 BASIC

Gene SNX3, Length 890 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-202ENST00000349379 PDIA3P30101 505 aaKnown RBP25.51■■□□□ 1.67
SNX3-202ENST00000349379 HOXA13P31271 388 aaPredicted RBP25.51■■□□□ 1.67
SNX3-202ENST00000349379 ADD1P35611 737 aaKnown RBP25.51■■□□□ 1.67
SNX3-202ENST00000349379 GJA9P57773 515 aa25.51■■□□□ 1.67
SNX3-202ENST00000349379 TNFAIP2Q03169 654 aa25.51■■□□□ 1.67
SNX3-202ENST00000349379 PDE4DQ08499 809 aa25.51■■□□□ 1.67
SNX3-202ENST00000349379 CCSAPQ6IQ19 270 aaPredicted RBP25.51■■□□□ 1.67
SNX3-202ENST00000349379 RNF180Q86T96 592 aa25.51■■□□□ 1.67
SNX3-202ENST00000349379 MYH7BA7E2Y1 1941 aa25.51■■□□□ 1.67
SNX3-202ENST00000349379 KBTBD13C9JR72 458 aa25.5■■□□□ 1.67
SNX3-202ENST00000349379 PIK3CDO00329 1044 aa25.5■■□□□ 1.67
SNX3-202ENST00000349379 CTAGE5O15320 804 aa25.5■■□□□ 1.67
SNX3-202ENST00000349379 SMPD1P17405 629 aa25.5■■□□□ 1.67
SNX3-202ENST00000349379 FRMPD4Q14CM0 1322 aa25.5■■□□□ 1.67
SNX3-202ENST00000349379 ALDH8A1Q9H2A2 487 aaPredicted RBP25.5■■□□□ 1.67
SNX3-202ENST00000349379 PDRG1Q9NUG6 133 aa25.5■■□□□ 1.67
SNX3-202ENST00000349379 NAP1L2Q9ULW6 460 aaPredicted RBP25.5■■□□□ 1.67
SNX3-202ENST00000349379 PHF24Q9UPV7 400 aa25.5■■□□□ 1.67
SNX3-202ENST00000349379 MYADML2A6NDP7 307 aa25.49■■□□□ 1.67
SNX3-202ENST00000349379 NTRK3Q16288 839 aa25.49■■□□□ 1.67
SNX3-202ENST00000349379 DUSP28Q4G0W2 176 aa25.49■■□□□ 1.67
SNX3-202ENST00000349379 TMEM63BQ5T3F8 832 aa25.49■■□□□ 1.67
SNX3-202ENST00000349379 ARHGEF16Q5VV41 709 aa25.49■■□□□ 1.67
SNX3-202ENST00000349379 PDCD2LQ9BRP1 358 aa25.49■■□□□ 1.67
SNX3-202ENST00000349379 TSEN34Q9BSV6 310 aaKnown RBP25.49■■□□□ 1.67
SNX3-202ENST00000349379 Q9Y3F1 56 aa25.49■■□□□ 1.67
SNX3-202ENST00000349379 MEIS2O14770 477 aa25.48■■□□□ 1.67
SNX3-202ENST00000349379 EIF2AK2P19525 551 aaKnown RBP25.48■■□□□ 1.67
SNX3-202ENST00000349379 WWC2Q6AWC2 1192 aa25.48■■□□□ 1.67
SNX3-202ENST00000349379 ZNF274Q96GC6 653 aaPredicted RBP25.48■■□□□ 1.67
SNX3-202ENST00000349379 SENP6Q9GZR1 1112 aaPredicted RBP25.48■■□□□ 1.67
SNX3-202ENST00000349379 V9GY48 417 aaPredicted RBP25.48■■□□□ 1.67
SNX3-202ENST00000349379 NR3C2P08235 984 aa25.47■■□□□ 1.67
SNX3-202ENST00000349379 IRX5P78411 483 aaPredicted RBP25.47■■□□□ 1.67
SNX3-202ENST00000349379 STXBP2Q15833 593 aa25.47■■□□□ 1.67
SNX3-202ENST00000349379 PRPF38BQ5VTL8 546 aaKnown RBP25.47■■□□□ 1.67
SNX3-202ENST00000349379 TYW1BQ6NUM6 668 aa25.47■■□□□ 1.67
SNX3-202ENST00000349379 DPF3Q92784 378 aa25.47■■□□□ 1.67
SNX3-202ENST00000349379 GPKOWQ92917 476 aaPredicted RBP eCLIP25.47■■□□□ 1.67
SNX3-202ENST00000349379 WDR11Q9BZH6 1224 aa25.47■■□□□ 1.67
SNX3-202ENST00000349379 hCG_1984214I3L0E3 225 aa25.46■■□□□ 1.67
SNX3-202ENST00000349379 C6orf222P0C671 652 aaPredicted RBP25.46■■□□□ 1.67
SNX3-202ENST00000349379 PTGS1P23219 599 aa25.46■■□□□ 1.67
SNX3-202ENST00000349379 SNX17Q15036 470 aa25.46■■□□□ 1.67
SNX3-202ENST00000349379 PGM5Q15124 567 aa25.46■■□□□ 1.67
SNX3-202ENST00000349379 LRRC26Q2I0M4 334 aa25.46■■□□□ 1.67
SNX3-202ENST00000349379 PPP1R18Q6NYC8 613 aa25.46■■□□□ 1.67
SNX3-202ENST00000349379 TLK2Q86UE8 772 aa25.46■■□□□ 1.67
SNX3-202ENST00000349379 ZNF713Q8N859 430 aaPredicted RBP25.46■■□□□ 1.67
SNX3-202ENST00000349379 SCFD2Q8WU76 684 aa25.46■■□□□ 1.67
SNX3-202ENST00000349379 SPC25Q9HBM1 224 aa25.46■■□□□ 1.67
SNX3-202ENST00000349379 CEP290O15078 2479 aa25.46■■□□□ 1.67
SNX3-202ENST00000349379 MOXD2PA6NHM9 499 aa25.45■■□□□ 1.66
SNX3-202ENST00000349379 EIF3JO75822 258 aaKnown RBP25.45■■□□□ 1.66
SNX3-202ENST00000349379 MYCNP04198 464 aaPredicted RBP25.45■■□□□ 1.66
SNX3-202ENST00000349379 CCDC62Q6P9F0 684 aa25.45■■□□□ 1.66
SNX3-202ENST00000349379 USP17L6PQ6QN14 398 aa25.45■■□□□ 1.66
SNX3-202ENST00000349379 HEATR3Q7Z4Q2 680 aa25.45■■□□□ 1.66
SNX3-202ENST00000349379 VSIG10LQ86VR7 867 aa25.45■■□□□ 1.66
SNX3-202ENST00000349379 FCHSD1Q86WN1 690 aa25.45■■□□□ 1.66
SNX3-202ENST00000349379 TEX2Q8IWB9 1127 aa25.45■■□□□ 1.66
SNX3-202ENST00000349379 IL31RAQ8NI17 732 aa25.45■■□□□ 1.66
SNX3-202ENST00000349379 PRPF3O43395 683 aaKnown RBP25.44■■□□□ 1.66
SNX3-202ENST00000349379 IFNAR1P17181 557 aa25.44■■□□□ 1.66
SNX3-202ENST00000349379 CCT2P78371 535 aaKnown RBP25.44■■□□□ 1.66
SNX3-202ENST00000349379 KCNA10Q16322 511 aa25.44■■□□□ 1.66
SNX3-202ENST00000349379 PFKFB3Q16875 520 aaPredicted RBP25.44■■□□□ 1.66
SNX3-202ENST00000349379 CUL5Q93034 780 aa25.44■■□□□ 1.66
SNX3-202ENST00000349379 RNF26Q9BY78 433 aaPredicted RBP25.44■■□□□ 1.66
SNX3-202ENST00000349379 PSTPIP2Q9H939 334 aa25.44■■□□□ 1.66
SNX3-202ENST00000349379 NCOA5Q9HCD5 579 aaKnown RBP25.44■■□□□ 1.66
SNX3-202ENST00000349379 BARHL2Q9NY43 387 aa25.44■■□□□ 1.66
SNX3-202ENST00000349379 PCDH10Q9P2E7 1040 aa25.44■■□□□ 1.66
SNX3-202ENST00000349379 RBM27Q9P2N5 1060 aaKnown RBP25.44■■□□□ 1.66
SNX3-202ENST00000349379 DOCK5Q9H7D0 1870 aa25.43■■□□□ 1.66
SNX3-202ENST00000349379 A0A1W2PQ45 241 aaPredicted RBP25.43■■□□□ 1.66
SNX3-202ENST00000349379 A0A1W2PQY0 241 aa25.43■■□□□ 1.66
SNX3-202ENST00000349379 STXBP3O00186 592 aa25.43■■□□□ 1.66
SNX3-202ENST00000349379 NKRFO15226 690 aaKnown RBP eCLIP25.43■■□□□ 1.66
SNX3-202ENST00000349379 EVI5O60447 810 aa25.43■■□□□ 1.66
SNX3-202ENST00000349379 ARIH2O95376 493 aa25.43■■□□□ 1.66
SNX3-202ENST00000349379 ACLYP53396 1101 aa25.43■■□□□ 1.66
SNX3-202ENST00000349379 PKN1Q16512 942 aa25.43■■□□□ 1.66
SNX3-202ENST00000349379 C1orf53Q5VUE5 145 aa25.43■■□□□ 1.66
SNX3-202ENST00000349379 SLC39A5Q6ZMH5 540 aa25.43■■□□□ 1.66
SNX3-202ENST00000349379 NOL8Q76FK4 1167 aaKnown RBP25.43■■□□□ 1.66
SNX3-202ENST00000349379 PCSK9Q8NBP7 692 aaKnown RBP25.43■■□□□ 1.66
SNX3-202ENST00000349379 SMARCC2Q8TAQ2 1214 aa25.43■■□□□ 1.66
SNX3-202ENST00000349379 LARP6Q9BRS8 491 aaKnown RBP25.43■■□□□ 1.66
SNX3-202ENST00000349379 DYNC1LI2O43237 492 aaPredicted RBP25.42■■□□□ 1.66
SNX3-202ENST00000349379 RGS20O76081 388 aa25.42■■□□□ 1.66
SNX3-202ENST00000349379 TTLL4Q14679 1199 aa25.42■■□□□ 1.66
SNX3-202ENST00000349379 GNASQ5JWF2 1037 aa25.42■■□□□ 1.66
SNX3-202ENST00000349379 FERMT2Q96AC1 680 aa25.42■■□□□ 1.66
SNX3-202ENST00000349379 AP5M1Q9H0R1 490 aa25.42■■□□□ 1.66
SNX3-202ENST00000349379 NR2E3Q9Y5X4 410 aa25.42■■□□□ 1.66
SNX3-202ENST00000349379 SCN10AQ9Y5Y9 1956 aa25.42■■□□□ 1.66
SNX3-202ENST00000349379 ASGR1P07306 291 aa25.41■■□□□ 1.66
SNX3-202ENST00000349379 SCG2P13521 617 aa25.41■■□□□ 1.66
SNX3-202ENST00000349379 AK2P54819 239 aa25.41■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms