RNA–Protein interactions for RNA: ENST00000343053.4

NELFB-201, Transcript of negative elongation factor complex member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NELFB, Length 2,698 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFB-201ENST00000343053 IFIH1Q9BYX4 1025 aaKnown RBP26.74■■□□□ 1.87
NELFB-201ENST00000343053 DEF6Q9H4E7 631 aa26.74■■□□□ 1.87
NELFB-201ENST00000343053 ROBO3Q96MS0 1386 aa26.74■■□□□ 1.87
NELFB-201ENST00000343053 NRAPQ86VF7 1730 aa26.74■■□□□ 1.87
NELFB-201ENST00000343053 SPA17Q15506 151 aa26.74■■□□□ 1.87
NELFB-201ENST00000343053 MUM1L1Q5H9M0 696 aa26.74■■□□□ 1.87
NELFB-201ENST00000343053 TMED8Q6PL24 325 aaPredicted RBP26.74■■□□□ 1.87
NELFB-201ENST00000343053 BLOC1S4Q9NUP1 217 aa26.74■■□□□ 1.87
NELFB-201ENST00000343053 ANKRD65E5RJM6 399 aa26.73■■□□□ 1.87
NELFB-201ENST00000343053 TULP2O00295 520 aa26.73■■□□□ 1.87
NELFB-201ENST00000343053 NCK2O43639 380 aa26.73■■□□□ 1.87
NELFB-201ENST00000343053 KCNK18Q7Z418 384 aa26.73■■□□□ 1.87
NELFB-201ENST00000343053 FAM114A1Q8IWE2 563 aa26.73■■□□□ 1.87
NELFB-201ENST00000343053 FAM71BQ8TC56 605 aa26.73■■□□□ 1.87
NELFB-201ENST00000343053 ARHGEF1Q92888 912 aaKnown RBP26.73■■□□□ 1.87
NELFB-201ENST00000343053 CDK5RAP3Q96JB5 506 aa26.73■■□□□ 1.87
NELFB-201ENST00000343053 AK8Q96MA6 479 aa26.73■■□□□ 1.87
NELFB-201ENST00000343053 NUP58Q9BVL2 599 aa26.73■■□□□ 1.87
NELFB-201ENST00000343053 KANSL2Q9H9L4 492 aa26.73■■□□□ 1.87
NELFB-201ENST00000343053 EIF4A3P38919 411 aaKnown RBP26.73■■□□□ 1.87
NELFB-201ENST00000343053 VAV2P52735 878 aa26.73■■□□□ 1.87
NELFB-201ENST00000343053 TUBB4BP68371 445 aa26.73■■□□□ 1.87
NELFB-201ENST00000343053 CALCRLQ16602 461 aa26.73■■□□□ 1.87
NELFB-201ENST00000343053 CNNM4Q6P4Q7 775 aa26.73■■□□□ 1.87
NELFB-201ENST00000343053 NFRKBQ6P4R8 1299 aa26.73■■□□□ 1.87
NELFB-201ENST00000343053 SPZ1Q9BXG8 430 aa26.73■■□□□ 1.87
NELFB-201ENST00000343053 TANGO6Q9C0B7 1094 aa26.73■■□□□ 1.87
NELFB-201ENST00000343053 HPCAL4Q9UM19 191 aa26.73■■□□□ 1.87
NELFB-201ENST00000343053 SYF2O95926 243 aaKnown RBP26.73■■□□□ 1.87
NELFB-201ENST00000343053 GNA11P29992 359 aa26.73■■□□□ 1.87
NELFB-201ENST00000343053 SLC7A5Q01650 507 aa26.73■■□□□ 1.87
NELFB-201ENST00000343053 SV2BQ7L1I2 683 aa26.73■■□□□ 1.87
NELFB-201ENST00000343053 RRAGAQ7L523 313 aa26.73■■□□□ 1.87
NELFB-201ENST00000343053 C10orf67Q8IYJ2 551 aa26.73■■□□□ 1.87
NELFB-201ENST00000343053 EHBP1Q8NDI1 1231 aa26.73■■□□□ 1.87
NELFB-201ENST00000343053 TRIM34Q9BYJ4 488 aa26.73■■□□□ 1.87
NELFB-201ENST00000343053 PSD3Q9NYI0 1048 aa26.73■■□□□ 1.87
NELFB-201ENST00000343053 KDM4FA0A1W2PPD8 638 aa26.72■■□□□ 1.87
NELFB-201ENST00000343053 LRRC53A6NM62 1247 aa26.72■■□□□ 1.87
NELFB-201ENST00000343053 PICALMQ13492 652 aa26.72■■□□□ 1.87
NELFB-201ENST00000343053 TMC4Q7Z404 712 aa26.72■■□□□ 1.87
NELFB-201ENST00000343053 PNMA5Q96PV4 448 aa26.72■■□□□ 1.87
NELFB-201ENST00000343053 NDST4Q9H3R1 872 aa26.72■■□□□ 1.87
NELFB-201ENST00000343053 TMEM51Q9NW97 253 aa26.72■■□□□ 1.87
NELFB-201ENST00000343053 CNTNAP4Q9C0A0 1308 aa26.72■■□□□ 1.87
NELFB-201ENST00000343053 KIF11P52732 1056 aa26.72■■□□□ 1.87
NELFB-201ENST00000343053 UBE2SQ16763 222 aa26.72■■□□□ 1.87
NELFB-201ENST00000343053 CUEDC2Q9H467 287 aa26.72■■□□□ 1.87
NELFB-201ENST00000343053 GPCPD1Q9NPB8 672 aa26.72■■□□□ 1.87
NELFB-201ENST00000343053 TBC1D7Q9P0N9 293 aa26.72■■□□□ 1.87
NELFB-201ENST00000343053 DDX60LQ5H9U9 1706 aaKnown RBP26.71■■□□□ 1.87
NELFB-201ENST00000343053 TNNI2P48788 182 aa26.71■■□□□ 1.87
NELFB-201ENST00000343053 CKAP4Q07065 602 aaKnown RBP26.71■■□□□ 1.87
NELFB-201ENST00000343053 VWA3BQ502W6 1294 aa26.71■■□□□ 1.87
NELFB-201ENST00000343053 CCDC170Q8IYT3 715 aa26.71■■□□□ 1.87
NELFB-201ENST00000343053 AKR1B10O60218 316 aa26.71■■□□□ 1.87
NELFB-201ENST00000343053 GSTO1P78417 241 aa26.71■■□□□ 1.87
NELFB-201ENST00000343053 AMPD3Q01432 767 aa26.71■■□□□ 1.87
NELFB-201ENST00000343053 APBA1Q02410 837 aa26.71■■□□□ 1.87
NELFB-201ENST00000343053 LARP4BQ92615 738 aaKnown RBP26.71■■□□□ 1.87
NELFB-201ENST00000343053 ERGIC2Q96RQ1 377 aa26.71■■□□□ 1.87
NELFB-201ENST00000343053 SELENOOQ9BVL4 669 aa26.71■■□□□ 1.87
NELFB-201ENST00000343053 PCDHA13Q9Y5I0 950 aa26.71■■□□□ 1.87
NELFB-201ENST00000343053 RPS6KA4O75676 772 aa26.7■■□□□ 1.86
NELFB-201ENST00000343053 GGCXP38435 758 aa26.7■■□□□ 1.86
NELFB-201ENST00000343053 ZNF804AQ7Z570 1209 aa26.7■■□□□ 1.86
NELFB-201ENST00000343053 ZSCAN29Q8IWY8 852 aaPredicted RBP26.7■■□□□ 1.86
NELFB-201ENST00000343053 NLRC4Q9NPP4 1024 aa26.7■■□□□ 1.86
NELFB-201ENST00000343053 BUB1O43683 1085 aa26.7■■□□□ 1.86
NELFB-201ENST00000343053 UFL1O94874 794 aa26.7■■□□□ 1.86
NELFB-201ENST00000343053 SSBP05455 408 aaKnown RBP eCLIP26.7■■□□□ 1.86
NELFB-201ENST00000343053 ENOX2Q16206 610 aaKnown RBP26.7■■□□□ 1.86
NELFB-201ENST00000343053 SNX29Q8TEQ0 813 aa26.7■■□□□ 1.86
NELFB-201ENST00000343053 SALL4Q9UJQ4 1053 aa26.7■■□□□ 1.86
NELFB-201ENST00000343053 RTCBQ9Y3I0 505 aaKnown RBP26.7■■□□□ 1.86
NELFB-201ENST00000343053 GPSM2P81274 684 aa26.69■■□□□ 1.86
NELFB-201ENST00000343053 CACNB1Q02641 598 aaPredicted RBP26.69■■□□□ 1.86
NELFB-201ENST00000343053 C16orf86Q6ZW13 317 aa26.69■■□□□ 1.86
NELFB-201ENST00000343053 RETREG2Q8NC44 543 aa26.69■■□□□ 1.86
NELFB-201ENST00000343053 ACBD3Q9H3P7 528 aa26.69■■□□□ 1.86
NELFB-201ENST00000343053 CCNL1Q9UK58 526 aaPredicted RBP26.69■■□□□ 1.86
NELFB-201ENST00000343053 SIK3Q9Y2K2 1263 aa26.69■■□□□ 1.86
NELFB-201ENST00000343053 CDK5RAP2Q96SN8 1893 aa26.69■■□□□ 1.86
NELFB-201ENST00000343053 SLURP2P0DP57 97 aa26.69■■□□□ 1.86
NELFB-201ENST00000343053 GFPT1Q06210 699 aaPredicted RBP26.69■■□□□ 1.86
NELFB-201ENST00000343053 FEZ2Q9UHY8 353 aaPredicted RBP26.69■■□□□ 1.86
NELFB-201ENST00000343053 CENPPQ6IPU0 288 aa26.68■■□□□ 1.86
NELFB-201ENST00000343053 PURBQ96QR8 312 aaKnown RBP26.68■■□□□ 1.86
NELFB-201ENST00000343053 LRRC1Q9BTT6 524 aa26.68■■□□□ 1.86
NELFB-201ENST00000343053 MAGEF1Q9HAY2 307 aa26.68■■□□□ 1.86
NELFB-201ENST00000343053 DMGDHQ9UI17 866 aaKnown RBP26.68■■□□□ 1.86
NELFB-201ENST00000343053 F8W031 263 aaPredicted RBP26.68■■□□□ 1.86
NELFB-201ENST00000343053 GRAPQ13588 217 aa26.68■■□□□ 1.86
NELFB-201ENST00000343053 ECM1Q16610 540 aa26.68■■□□□ 1.86
NELFB-201ENST00000343053 NEDD1Q8NHV4 660 aa26.68■■□□□ 1.86
NELFB-201ENST00000343053 GRAPLQ8TC17 118 aaPredicted RBP26.68■■□□□ 1.86
NELFB-201ENST00000343053 LZTS2Q9BRK4 669 aa26.68■■□□□ 1.86
NELFB-201ENST00000343053 RABEP2Q9H5N1 569 aa26.68■■□□□ 1.86
NELFB-201ENST00000343053 SH2D4AQ9H788 454 aa26.68■■□□□ 1.86
NELFB-201ENST00000343053 MAP9Q49MG5 647 aa26.67■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms