RNA–Protein interactions for RNA: ENST00000342690.4

RBM38-201, Transcript of RNA binding motif protein 38, humanhuman

TSL 3

Gene RBM38, Length 852 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM38-201ENST00000342690 PRAMEF19Q5SWL8 479 aa25.21■■□□□ 1.63
RBM38-201ENST00000342690 USP17L6PQ6QN14 398 aa25.21■■□□□ 1.63
RBM38-201ENST00000342690 SHISA4Q96DD7 197 aa25.21■■□□□ 1.63
RBM38-201ENST00000342690 INTS4Q96HW7 963 aaKnown RBP25.21■■□□□ 1.63
RBM38-201ENST00000342690 RPTORQ8N122 1335 aa25.2■■□□□ 1.62
RBM38-201ENST00000342690 PIK3CDO00329 1044 aa25.2■■□□□ 1.62
RBM38-201ENST00000342690 CCND3P30281 292 aaPredicted RBP25.2■■□□□ 1.62
RBM38-201ENST00000342690 FCHSD1Q86WN1 690 aa25.2■■□□□ 1.62
RBM38-201ENST00000342690 FAM177A1Q8N128 213 aaPredicted RBP25.2■■□□□ 1.62
RBM38-201ENST00000342690 MORC4Q8TE76 937 aa25.2■■□□□ 1.62
RBM38-201ENST00000342690 CUL5Q93034 780 aa25.2■■□□□ 1.62
RBM38-201ENST00000342690 AIFM3Q96NN9 605 aa25.2■■□□□ 1.62
RBM38-201ENST00000342690 HMX1Q9NP08 348 aaPredicted RBP25.2■■□□□ 1.62
RBM38-201ENST00000342690 VPS54Q9P1Q0 977 aa25.2■■□□□ 1.62
RBM38-201ENST00000342690 LOC102724159A0A0B4J2E5 919 aa25.19■■□□□ 1.62
RBM38-201ENST00000342690 SMCO2A6NFE2 343 aa25.19■■□□□ 1.62
RBM38-201ENST00000342690 GJB2P29033 226 aa25.19■■□□□ 1.62
RBM38-201ENST00000342690 TRIM29Q14134 588 aa25.19■■□□□ 1.62
RBM38-201ENST00000342690 PWP2Q15269 919 aaKnown RBP25.19■■□□□ 1.62
RBM38-201ENST00000342690 UBE2SQ16763 222 aa25.19■■□□□ 1.62
RBM38-201ENST00000342690 RMDN3Q96TC7 470 aa25.19■■□□□ 1.62
RBM38-201ENST00000342690 XRN2Q9H0D6 950 aaKnown RBP eCLIP25.19■■□□□ 1.623e-6■■■□□ 16.8
RBM38-201ENST00000342690 RNF208Q9H0X6 261 aa25.19■■□□□ 1.62
RBM38-201ENST00000342690 GLT8D2Q9H1C3 349 aa25.19■■□□□ 1.62
RBM38-201ENST00000342690 RIC8AQ9NPQ8 531 aa25.19■■□□□ 1.62
RBM38-201ENST00000342690 PXMP2Q9NR77 195 aa25.19■■□□□ 1.62
RBM38-201ENST00000342690 ESYT2A0FGR8 921 aa25.18■■□□□ 1.62
RBM38-201ENST00000342690 EIF2AK2P19525 551 aaKnown RBP25.18■■□□□ 1.62
RBM38-201ENST00000342690 EDNRBP24530 442 aa25.18■■□□□ 1.62
RBM38-201ENST00000342690 ADCY7P51828 1080 aa25.18■■□□□ 1.62
RBM38-201ENST00000342690 ARHGEF16Q5VV41 709 aa25.18■■□□□ 1.62
RBM38-201ENST00000342690 NSUN6Q8TEA1 469 aaKnown RBP25.18■■□□□ 1.62
RBM38-201ENST00000342690 KATNBL1Q9H079 304 aa25.18■■□□□ 1.62
RBM38-201ENST00000342690 C6orf50Q9HD87 102 aa25.18■■□□□ 1.62
RBM38-201ENST00000342690 TSHZ2Q9NRE2 1034 aa25.18■■□□□ 1.62
RBM38-201ENST00000342690 NRBP1Q9UHY1 535 aa25.18■■□□□ 1.62
RBM38-201ENST00000342690 CNPY2Q9Y2B0 182 aa25.18■■□□□ 1.62
RBM38-201ENST00000342690 CENPFP49454 3210 aa25.18■■□□□ 1.62
RBM38-201ENST00000342690 ZNF865P0CJ78 1059 aaPredicted RBP25.17■■□□□ 1.62
RBM38-201ENST00000342690 MRPL12P52815 198 aaKnown RBP25.17■■□□□ 1.62
RBM38-201ENST00000342690 NLRP5P59047 1200 aa25.17■■□□□ 1.62
RBM38-201ENST00000342690 ZMYND12Q9H0C1 365 aa25.17■■□□□ 1.62
RBM38-201ENST00000342690 PAK6Q9NQU5 681 aaPredicted RBP25.17■■□□□ 1.62
RBM38-201ENST00000342690 FOXD4L1Q9NU39 408 aa25.17■■□□□ 1.62
RBM38-201ENST00000342690 ZHX1Q9UKY1 873 aaPredicted RBP25.17■■□□□ 1.62
RBM38-201ENST00000342690 CCDC85CA6NKD9 419 aa25.16■■□□□ 1.62
RBM38-201ENST00000342690 GNA11P29992 359 aa25.16■■□□□ 1.62
RBM38-201ENST00000342690 FOSBP53539 338 aa25.16■■□□□ 1.62
RBM38-201ENST00000342690 ACVR2BQ13705 512 aa25.16■■□□□ 1.62
RBM38-201ENST00000342690 TEX2Q8IWB9 1127 aa25.16■■□□□ 1.62
RBM38-201ENST00000342690 BICD2Q8TD16 824 aa25.16■■□□□ 1.62
RBM38-201ENST00000342690 MPHOSPH6Q99547 160 aaKnown RBP25.16■■□□□ 1.62
RBM38-201ENST00000342690 ABHD16BQ9H3Z7 469 aa25.16■■□□□ 1.62
RBM38-201ENST00000342690 FRMPD4Q14CM0 1322 aa25.15■■□□□ 1.62
RBM38-201ENST00000342690 FRMPD3Q5JV73 1810 aa25.15■■□□□ 1.62
RBM38-201ENST00000342690 ADAMTS3O15072 1205 aa25.15■■□□□ 1.62
RBM38-201ENST00000342690 CNGA1P29973 690 aa25.15■■□□□ 1.62
RBM38-201ENST00000342690 PDE4DQ08499 809 aa25.15■■□□□ 1.62
RBM38-201ENST00000342690 EEPD1Q7L9B9 569 aa25.15■■□□□ 1.62
RBM38-201ENST00000342690 FBXO16Q8IX29 292 aaPredicted RBP25.15■■□□□ 1.62
RBM38-201ENST00000342690 IL31RAQ8NI17 732 aa25.15■■□□□ 1.62
RBM38-201ENST00000342690 C8orf76Q96K31 380 aa25.15■■□□□ 1.62
RBM38-201ENST00000342690 PDCD2LQ9BRP1 358 aa25.15■■□□□ 1.62
RBM38-201ENST00000342690 B4DLN1 442 aa25.14■■□□□ 1.62
RBM38-201ENST00000342690 CLK2P49760 499 aaKnown RBP25.14■■□□□ 1.62
RBM38-201ENST00000342690 PGM5Q15124 567 aa25.14■■□□□ 1.62
RBM38-201ENST00000342690 GALNT17Q6IS24 598 aa25.14■■□□□ 1.62
RBM38-201ENST00000342690 IWS1Q96ST2 819 aa25.14■■□□□ 1.62
RBM38-201ENST00000342690 TMEM106CQ9BVX2 250 aa25.14■■□□□ 1.62
RBM38-201ENST00000342690 TMEM260Q9NX78 707 aa25.14■■□□□ 1.62
RBM38-201ENST00000342690 SEPT4O43236 478 aa25.13■■□□□ 1.61
RBM38-201ENST00000342690 NR3C2P08235 984 aa25.13■■□□□ 1.61
RBM38-201ENST00000342690 DEFB118Q96PH6 123 aa25.13■■□□□ 1.61
RBM38-201ENST00000342690 PHF20Q9BVI0 1012 aa25.13■■□□□ 1.61
RBM38-201ENST00000342690 BRMS1Q9HCU9 246 aa25.13■■□□□ 1.61
RBM38-201ENST00000342690 VTA1Q9NP79 307 aa25.13■■□□□ 1.61
RBM38-201ENST00000342690 KCNJ14Q9UNX9 436 aa25.13■■□□□ 1.61
RBM38-201ENST00000342690 POTEFA5A3E0 1075 aa25.12■■□□□ 1.61
RBM38-201ENST00000342690 GJB1P08034 283 aa25.12■■□□□ 1.61
RBM38-201ENST00000342690 PGBD1Q96JS3 809 aa25.12■■□□□ 1.61
RBM38-201ENST00000342690 GJB4Q9NTQ9 266 aa25.12■■□□□ 1.61
RBM38-201ENST00000342690 DDX20Q9UHI6 824 aaKnown RBP25.12■■□□□ 1.61
RBM38-201ENST00000342690 PCDHA6Q9UN73 950 aa25.12■■□□□ 1.61
RBM38-201ENST00000342690 PCDHA4Q9UN74 947 aa25.12■■□□□ 1.61
RBM38-201ENST00000342690 RBM19Q9Y4C8 960 aaKnown RBP25.12■■□□□ 1.61
RBM38-201ENST00000342690 PCDHA8Q9Y5H6 950 aa25.12■■□□□ 1.61
RBM38-201ENST00000342690 SPDYE3A6NKU9 549 aa25.11■■□□□ 1.61
RBM38-201ENST00000342690 AKR1A1P14550 325 aa25.11■■□□□ 1.61
RBM38-201ENST00000342690 PDCP20941 246 aa25.11■■□□□ 1.61
RBM38-201ENST00000342690 SOX10P56693 466 aa25.11■■□□□ 1.61
RBM38-201ENST00000342690 ANO1Q5XXA6 986 aa25.11■■□□□ 1.61
RBM38-201ENST00000342690 KRT40Q6A162 431 aa25.11■■□□□ 1.61
RBM38-201ENST00000342690 MCTP2Q6DN12 878 aa25.11■■□□□ 1.61
RBM38-201ENST00000342690 TAPT1Q6NXT6 567 aa25.11■■□□□ 1.61
RBM38-201ENST00000342690 BLIDQ8IZY5 108 aa25.11■■□□□ 1.61
RBM38-201ENST00000342690 REXO1Q8N1G1 1221 aaKnown RBP25.11■■□□□ 1.61
RBM38-201ENST00000342690 DAGLBQ8NCG7 672 aa25.11■■□□□ 1.61
RBM38-201ENST00000342690 SPRYD3Q8NCJ5 442 aa25.11■■□□□ 1.61
RBM38-201ENST00000342690 ANO3Q9BYT9 981 aa25.11■■□□□ 1.61
RBM38-201ENST00000342690 PDGFCQ9NRA1 345 aa25.11■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms