RNA–Protein interactions for RNA: ENST00000340699.7

PBX1-201, Transcript of PBX homeobox 1, humanhuman

TSL 4

Gene PBX1, Length 734 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-201ENST00000340699 GOLGA8AA7E2F4 631 aa26■■□□□ 1.75
PBX1-201ENST00000340699 GOLGA8BA8MQT2 603 aa26■■□□□ 1.75
PBX1-201ENST00000340699 DYNC1LI2O43237 492 aaPredicted RBP26■■□□□ 1.75
PBX1-201ENST00000340699 EIF5BO60841 1220 aaKnown RBP26■■□□□ 1.75
PBX1-201ENST00000340699 ACLYP53396 1101 aa26■■□□□ 1.75
PBX1-201ENST00000340699 STXBP2Q15833 593 aa26■■□□□ 1.75
PBX1-201ENST00000340699 A0A1W2PQ45 241 aaPredicted RBP25.99■■□□□ 1.75
PBX1-201ENST00000340699 A0A1W2PQY0 241 aa25.99■■□□□ 1.75
PBX1-201ENST00000340699 RBM47A0AV96 593 aaKnown RBP25.99■■□□□ 1.75
PBX1-201ENST00000340699 MYADML2A6NDP7 307 aa25.99■■□□□ 1.75
PBX1-201ENST00000340699 EIF2AK2P19525 551 aaKnown RBP25.99■■□□□ 1.75
PBX1-201ENST00000340699 HOXA13P31271 388 aaPredicted RBP25.99■■□□□ 1.75
PBX1-201ENST00000340699 RCAN1P53805 252 aa25.99■■□□□ 1.75
PBX1-201ENST00000340699 RTP1P59025 263 aa25.99■■□□□ 1.75
PBX1-201ENST00000340699 DUSP28Q4G0W2 176 aa25.99■■□□□ 1.75
PBX1-201ENST00000340699 SCFD2Q8WU76 684 aa25.99■■□□□ 1.75
PBX1-201ENST00000340699 BRF1Q92994 677 aa25.99■■□□□ 1.75
PBX1-201ENST00000340699 PXMP2Q9NR77 195 aa25.99■■□□□ 1.75
PBX1-201ENST00000340699 ATP11BQ9Y2G3 1177 aa25.99■■□□□ 1.75
PBX1-201ENST00000340699 ZEB2O60315 1214 aa25.98■■□□□ 1.75
PBX1-201ENST00000340699 APOBRQ0VD83 1088 aa25.98■■□□□ 1.75
PBX1-201ENST00000340699 PPP2R5BQ15173 497 aa25.98■■□□□ 1.75
PBX1-201ENST00000340699 CCSAPQ6IQ19 270 aaPredicted RBP25.98■■□□□ 1.75
PBX1-201ENST00000340699 CUL5Q93034 780 aa25.98■■□□□ 1.75
PBX1-201ENST00000340699 VTI1AQ96AJ9 217 aa25.98■■□□□ 1.75
PBX1-201ENST00000340699 GLT1D1Q96MS3 346 aa25.98■■□□□ 1.75
PBX1-201ENST00000340699 STARD7Q9NQZ5 370 aa25.98■■□□□ 1.75
PBX1-201ENST00000340699 ZMYND8Q9ULU4 1186 aaPredicted RBP25.98■■□□□ 1.75
PBX1-201ENST00000340699 ASGR1P07306 291 aa25.97■■□□□ 1.75
PBX1-201ENST00000340699 NR3C2P08235 984 aa25.97■■□□□ 1.75
PBX1-201ENST00000340699 NKX3-2P78367 333 aa25.97■■□□□ 1.75
PBX1-201ENST00000340699 RUFY3Q7L099 469 aa25.97■■□□□ 1.75
PBX1-201ENST00000340699 FCHSD1Q86WN1 690 aa25.97■■□□□ 1.75
PBX1-201ENST00000340699 FBXL16Q8N461 479 aa25.97■■□□□ 1.75
PBX1-201ENST00000340699 CYP46A1Q9Y6A2 500 aa25.97■■□□□ 1.75
PBX1-201ENST00000340699 CCDC196A0A1B0GTZ2 297 aa25.96■■□□□ 1.75
PBX1-201ENST00000340699 NKRFO15226 690 aaKnown RBP eCLIP25.96■■□□□ 1.75
PBX1-201ENST00000340699 SYN1P17600 705 aa25.96■■□□□ 1.75
PBX1-201ENST00000340699 METAP2P50579 478 aaKnown RBP eCLIP25.96■■□□□ 1.75
PBX1-201ENST00000340699 IRX5P78411 483 aaPredicted RBP25.96■■□□□ 1.75
PBX1-201ENST00000340699 BEX3Q00994 111 aa25.96■■□□□ 1.75
PBX1-201ENST00000340699 TTLL4Q14679 1199 aa25.96■■□□□ 1.75
PBX1-201ENST00000340699 FSCN1Q16658 493 aaKnown RBP25.96■■□□□ 1.75
PBX1-201ENST00000340699 C1orf53Q5VUE5 145 aa25.96■■□□□ 1.75
PBX1-201ENST00000340699 ZSWIM6Q9HCJ5 1215 aa25.96■■□□□ 1.75
PBX1-201ENST00000340699 hCG_1642624A0A1W2PR95 340 aa25.95■■□□□ 1.74
PBX1-201ENST00000340699 EIF3JO75822 258 aaKnown RBP25.95■■□□□ 1.74
PBX1-201ENST00000340699 TXNP10599 105 aaKnown RBP25.95■■□□□ 1.74
PBX1-201ENST00000340699 SNX17Q15036 470 aa25.95■■□□□ 1.74
PBX1-201ENST00000340699 TMEM63BQ5T3F8 832 aa25.95■■□□□ 1.74
PBX1-201ENST00000340699 SEPT14Q6ZU15 432 aa25.95■■□□□ 1.74
PBX1-201ENST00000340699 SMARCC2Q8TAQ2 1214 aa25.95■■□□□ 1.74
PBX1-201ENST00000340699 TM6SF1Q9BZW5 370 aa25.95■■□□□ 1.74
PBX1-201ENST00000340699 PRKAG2Q9UGJ0 569 aa25.95■■□□□ 1.74
PBX1-201ENST00000340699 ELP1O95163 1332 aa25.94■■□□□ 1.74
PBX1-201ENST00000340699 CTAGE5O15320 804 aa25.94■■□□□ 1.74
PBX1-201ENST00000340699 MYCLP12524 364 aaPredicted RBP25.94■■□□□ 1.74
PBX1-201ENST00000340699 TRIM60Q495X7 471 aa25.94■■□□□ 1.74
PBX1-201ENST00000340699 CHRDL2Q6WN34 429 aa25.94■■□□□ 1.74
PBX1-201ENST00000340699 OR6J1Q8NGC5 347 aa25.94■■□□□ 1.74
PBX1-201ENST00000340699 PDCD2LQ9BRP1 358 aa25.94■■□□□ 1.74
PBX1-201ENST00000340699 AGXT2Q9BYV1 514 aa25.94■■□□□ 1.74
PBX1-201ENST00000340699 BRDTQ58F21 947 aaPredicted RBP25.93■■□□□ 1.74
PBX1-201ENST00000340699 HEATR3Q7Z4Q2 680 aa25.93■■□□□ 1.74
PBX1-201ENST00000340699 COLQQ9Y215 455 aaPredicted RBP25.93■■□□□ 1.74
PBX1-201ENST00000340699 CNTNAP5Q8WYK1 1306 aa25.92■■□□□ 1.74
PBX1-201ENST00000340699 CABYRO75952 493 aa25.92■■□□□ 1.74
PBX1-201ENST00000340699 PTGS1P23219 599 aa25.92■■□□□ 1.74
PBX1-201ENST00000340699 CDC27P30260 824 aa25.92■■□□□ 1.74
PBX1-201ENST00000340699 CCND2P30279 289 aa25.92■■□□□ 1.74
PBX1-201ENST00000340699 CPT1AP50416 773 aa25.92■■□□□ 1.74
PBX1-201ENST00000340699 PGM5Q15124 567 aa25.92■■□□□ 1.74
PBX1-201ENST00000340699 PSTPIP2Q9H939 334 aa25.92■■□□□ 1.74
PBX1-201ENST00000340699 V9GY48 417 aaPredicted RBP25.92■■□□□ 1.74
PBX1-201ENST00000340699 ADD1P35611 737 aaKnown RBP25.91■■□□□ 1.74
PBX1-201ENST00000340699 VSIG10LQ86VR7 867 aa25.91■■□□□ 1.74
PBX1-201ENST00000340699 FAM217BQ9NTX9 383 aaPredicted RBP25.91■■□□□ 1.74
PBX1-201ENST00000340699 A0A0U1RQG5 324 aaPredicted RBP25.9■■□□□ 1.74
PBX1-201ENST00000340699 PIK3CDO00329 1044 aa25.9■■□□□ 1.74
PBX1-201ENST00000340699 TLE2Q04725 743 aa25.9■■□□□ 1.74
PBX1-201ENST00000340699 USP17L6PQ6QN14 398 aa25.9■■□□□ 1.74
PBX1-201ENST00000340699 CXCL17Q6UXB2 119 aa25.9■■□□□ 1.74
PBX1-201ENST00000340699 GPKOWQ92917 476 aaPredicted RBP eCLIP25.9■■□□□ 1.74
PBX1-201ENST00000340699 PRDM5Q9NQX1 630 aaPredicted RBP25.9■■□□□ 1.74
PBX1-201ENST00000340699 MRVI1Q9Y6F6 885 aa25.9■■□□□ 1.74
PBX1-201ENST00000340699 PQBP1O60828 265 aaKnown RBP25.89■■□□□ 1.74
PBX1-201ENST00000340699 ARIH2O95376 493 aa25.89■■□□□ 1.74
PBX1-201ENST00000340699 FUT2Q10981 343 aa25.89■■□□□ 1.74
PBX1-201ENST00000340699 CCDC62Q6P9F0 684 aa25.89■■□□□ 1.74
PBX1-201ENST00000340699 KCNV1Q6PIU1 500 aa25.89■■□□□ 1.74
PBX1-201ENST00000340699 COPS5Q92905 334 aa25.89■■□□□ 1.74
PBX1-201ENST00000340699 UPF3BQ9BZI7 483 aaKnown RBP25.89■■□□□ 1.74
PBX1-201ENST00000340699 PDRG1Q9NUG6 133 aa25.89■■□□□ 1.74
PBX1-201ENST00000340699 POLR3EQ9NVU0 708 aa25.89■■□□□ 1.74
PBX1-201ENST00000340699 MROH7Q68CQ1 1323 aa25.88■■□□□ 1.73
PBX1-201ENST00000340699 KIAA1217Q5T5P2 1943 aa25.88■■□□□ 1.73
PBX1-201ENST00000340699 CEP290O15078 2479 aa25.88■■□□□ 1.73
PBX1-201ENST00000340699 DCDC2CA8MYV0 355 aa25.88■■□□□ 1.73
PBX1-201ENST00000340699 hCG_1984214I3L0E3 225 aa25.88■■□□□ 1.73
PBX1-201ENST00000340699 MEIS2O14770 477 aa25.88■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms