RNA–Protein interactions for RNA: ENST00000339363.7

RPGR-202, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RPGR, Length 3,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-202ENST00000339363 PLAAQ9Y263 795 aa10.23□□□□□ -0.77
RPGR-202ENST00000339363 OVOS2A0A0G2JMS6 1433 aa10.23□□□□□ -0.77
RPGR-202ENST00000339363 COL4A1P02462 1669 aa10.23□□□□□ -0.77
RPGR-202ENST00000339363 CAMTA1Q9Y6Y1 1673 aa10.23□□□□□ -0.77
RPGR-202ENST00000339363 MYH8P13535 1937 aa10.23□□□□□ -0.77
RPGR-202ENST00000339363 LAMB4A4D0S4 1761 aa10.23□□□□□ -0.77
RPGR-202ENST00000339363 AKR1B10O60218 316 aa10.23□□□□□ -0.77
RPGR-202ENST00000339363 PYGBP11216 843 aa10.23□□□□□ -0.77
RPGR-202ENST00000339363 SCNN1BP51168 640 aa10.23□□□□□ -0.77
RPGR-202ENST00000339363 CCDC6Q16204 474 aa10.23□□□□□ -0.77
RPGR-202ENST00000339363 CCDC57Q2TAC2 916 aa10.23□□□□□ -0.77
RPGR-202ENST00000339363 RASIP1Q5U651 963 aa10.23□□□□□ -0.77
RPGR-202ENST00000339363 NOSTRINQ8IVI9 506 aa10.23□□□□□ -0.77
RPGR-202ENST00000339363 RNF168Q8IYW5 571 aaPredicted RBP10.23□□□□□ -0.77
RPGR-202ENST00000339363 MIGA1Q8NAN2 632 aa10.23□□□□□ -0.77
RPGR-202ENST00000339363 CCDC42Q96M95 316 aa10.23□□□□□ -0.77
RPGR-202ENST00000339363 NOVA2Q9UNW9 492 aaKnown RBP10.23□□□□□ -0.77
RPGR-202ENST00000339363 CD2APQ9Y5K6 639 aa10.23□□□□□ -0.77
RPGR-202ENST00000339363 DUSP10Q9Y6W6 482 aa10.23□□□□□ -0.77
RPGR-202ENST00000339363 ANKRD33BA6NCL7 494 aa10.23□□□□□ -0.77
RPGR-202ENST00000339363 PPP6R2O75170 966 aa10.23□□□□□ -0.77
RPGR-202ENST00000339363 TATP17735 454 aaPredicted RBP10.23□□□□□ -0.77
RPGR-202ENST00000339363 ATP4AP20648 1035 aa10.23□□□□□ -0.77
RPGR-202ENST00000339363 CWF19L1Q69YN2 538 aaKnown RBP10.23□□□□□ -0.77
RPGR-202ENST00000339363 CEP128Q6ZU80 1094 aa10.23□□□□□ -0.77
RPGR-202ENST00000339363 KLHL7Q8IXQ5 586 aa10.23□□□□□ -0.77
RPGR-202ENST00000339363 AGAP11Q8TF27 550 aa10.23□□□□□ -0.77
RPGR-202ENST00000339363 EPAS1Q99814 870 aa10.23□□□□□ -0.77
RPGR-202ENST00000339363 VPS54Q9P1Q0 977 aa10.23□□□□□ -0.77
RPGR-202ENST00000339363 CORO1CQ9ULV4 474 aaPredicted RBP10.23□□□□□ -0.77
RPGR-202ENST00000339363 ATXN2Q99700 1313 aaKnown RBP10.23□□□□□ -0.77
RPGR-202ENST00000339363 GOLGA8AA7E2F4 631 aa10.22□□□□□ -0.77
RPGR-202ENST00000339363 CETN3O15182 167 aa10.22□□□□□ -0.77
RPGR-202ENST00000339363 CNGA1P29973 690 aa10.22□□□□□ -0.77
RPGR-202ENST00000339363 PBX1P40424 430 aa10.22□□□□□ -0.77
RPGR-202ENST00000339363 IARSP41252 1262 aaKnown RBP10.22□□□□□ -0.77
RPGR-202ENST00000339363 MAP3K12Q12852 859 aa10.22□□□□□ -0.77
RPGR-202ENST00000339363 IL17AQ16552 155 aa10.22□□□□□ -0.77
RPGR-202ENST00000339363 TMEM67Q5HYA8 995 aa10.22□□□□□ -0.77
RPGR-202ENST00000339363 RUFY4Q6ZNE9 571 aa10.22□□□□□ -0.77
RPGR-202ENST00000339363 FAM114A1Q8IWE2 563 aa10.22□□□□□ -0.77
RPGR-202ENST00000339363 ARL10Q8N8L6 244 aa10.22□□□□□ -0.77
RPGR-202ENST00000339363 BORCS6Q96GS4 357 aa10.22□□□□□ -0.77
RPGR-202ENST00000339363 DCAF5Q96JK2 942 aa10.22□□□□□ -0.77
RPGR-202ENST00000339363 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.22□□□□□ -0.77
RPGR-202ENST00000339363 SWAP70Q9UH65 585 aa10.22□□□□□ -0.77
RPGR-202ENST00000339363 NUP188Q5SRE5 1749 aa10.22□□□□□ -0.77
RPGR-202ENST00000339363 RCCD1A6NED2 376 aa10.22□□□□□ -0.77
RPGR-202ENST00000339363 ZBTB43O43298 467 aa10.22□□□□□ -0.77
RPGR-202ENST00000339363 TRIM37O94972 964 aa10.22□□□□□ -0.77
RPGR-202ENST00000339363 PLCD1P51178 756 aa10.22□□□□□ -0.77
RPGR-202ENST00000339363 CUL4BQ13620 913 aa10.22□□□□□ -0.77
RPGR-202ENST00000339363 SPATA1Q5VX52 437 aa10.22□□□□□ -0.77
RPGR-202ENST00000339363 ANKRD13CQ8N6S4 541 aa10.22□□□□□ -0.77
RPGR-202ENST00000339363 VGLL2Q8N8G2 317 aa10.22□□□□□ -0.77
RPGR-202ENST00000339363 TTLL11Q8NHH1 800 aa10.22□□□□□ -0.77
RPGR-202ENST00000339363 LRRC15Q8TF66 581 aa10.22□□□□□ -0.77
RPGR-202ENST00000339363 LEMD3Q9Y2U8 911 aa10.22□□□□□ -0.77
RPGR-202ENST00000339363 A0A1B0GTH6 734 aa10.22□□□□□ -0.77
RPGR-202ENST00000339363 PDE6AP16499 860 aa10.22□□□□□ -0.77
RPGR-202ENST00000339363 ATP2A2P16615 1042 aaKnown RBP10.22□□□□□ -0.77
RPGR-202ENST00000339363 IFNAR2P48551 515 aa10.22□□□□□ -0.77
RPGR-202ENST00000339363 SESN3P58005 492 aa10.22□□□□□ -0.77
RPGR-202ENST00000339363 TSNAXIP1Q2TAA8 658 aa10.22□□□□□ -0.77
RPGR-202ENST00000339363 TLDC1Q6P9B6 456 aa10.22□□□□□ -0.77
RPGR-202ENST00000339363 SPATA4Q8NEY3 305 aa10.22□□□□□ -0.77
RPGR-202ENST00000339363 AENQ8WTP8 325 aaKnown RBP10.22□□□□□ -0.77
RPGR-202ENST00000339363 STRBPQ96SI9 672 aaKnown RBP10.22□□□□□ -0.77
RPGR-202ENST00000339363 ASAP1Q9ULH1 1129 aa10.22□□□□□ -0.77
RPGR-202ENST00000339363 B4DLN1 442 aa10.21□□□□□ -0.77
RPGR-202ENST00000339363 PPP1R3GB7ZBB8 358 aa10.21□□□□□ -0.77
RPGR-202ENST00000339363 MMP1P03956 469 aa10.21□□□□□ -0.77
RPGR-202ENST00000339363 PTPREP23469 700 aa10.21□□□□□ -0.77
RPGR-202ENST00000339363 GBP1P32455 592 aa10.21□□□□□ -0.77
RPGR-202ENST00000339363 KLK7P49862 253 aa10.21□□□□□ -0.77
RPGR-202ENST00000339363 PMS1P54277 932 aaKnown RBP10.21□□□□□ -0.77
RPGR-202ENST00000339363 SLC4A8Q2Y0W8 1093 aa10.21□□□□□ -0.77
RPGR-202ENST00000339363 LCORLQ8N3X6 602 aa10.21□□□□□ -0.77
RPGR-202ENST00000339363 KIF2BQ8N4N8 673 aa10.21□□□□□ -0.77
RPGR-202ENST00000339363 OR2W6PQ8NHA6 318 aa10.21□□□□□ -0.77
RPGR-202ENST00000339363 IFT74Q96LB3 600 aa10.21□□□□□ -0.77
RPGR-202ENST00000339363 GBP5Q96PP8 586 aa10.21□□□□□ -0.77
RPGR-202ENST00000339363 ELAC2Q9BQ52 826 aaKnown RBP10.21□□□□□ -0.77
RPGR-202ENST00000339363 RHBDL2Q9NX52 303 aa10.21□□□□□ -0.77
RPGR-202ENST00000339363 EHD2Q9NZN4 543 aa10.21□□□□□ -0.77
RPGR-202ENST00000339363 ADD3Q9UEY8 706 aaKnown RBP10.21□□□□□ -0.77
RPGR-202ENST00000339363 TRIM49BA6NDI0 452 aa10.21□□□□□ -0.77
RPGR-202ENST00000339363 TPD52L2O43399 206 aaKnown RBP10.21□□□□□ -0.77
RPGR-202ENST00000339363 SMNDC1O75940 238 aaKnown RBP eCLIP10.21□□□□□ -0.77
RPGR-202ENST00000339363 ITGA6P23229 1130 aa10.21□□□□□ -0.77
RPGR-202ENST00000339363 MUM1Q2TAK8 710 aa10.21□□□□□ -0.77
RPGR-202ENST00000339363 TBC1D25Q3MII6 688 aa10.21□□□□□ -0.77
RPGR-202ENST00000339363 NT5DC1Q5TFE4 455 aa10.21□□□□□ -0.77
RPGR-202ENST00000339363 CDCA2Q69YH5 1023 aaPredicted RBP10.21□□□□□ -0.77
RPGR-202ENST00000339363 KANK3Q6NY19 840 aa10.21□□□□□ -0.77
RPGR-202ENST00000339363 RNF10Q8N5U6 811 aaKnown RBP10.21□□□□□ -0.77
RPGR-202ENST00000339363 MAGEC3Q8TD91 643 aa10.21□□□□□ -0.77
RPGR-202ENST00000339363 GPR108Q9NPR9 543 aa10.21□□□□□ -0.77
RPGR-202ENST00000339363 C2CD2Q9Y426 696 aa10.21□□□□□ -0.77
RPGR-202ENST00000339363 PDE2AO00408 941 aaPredicted RBP10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms