RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 SYNGAP1Q96PV0 1343 aa13.65□□□□□ -0.22
SPTLC1-202ENST00000337841 PARP14Q460N5 1801 aa13.65□□□□□ -0.22
SPTLC1-202ENST00000337841 DTNBO60941 627 aa13.65□□□□□ -0.22
SPTLC1-202ENST00000337841 CYP2C19P33261 490 aa13.65□□□□□ -0.22
SPTLC1-202ENST00000337841 ALDH5A1P51649 535 aaPredicted RBP13.65□□□□□ -0.22
SPTLC1-202ENST00000337841 SH3TC2Q8TF17 1288 aa13.65□□□□□ -0.22
SPTLC1-202ENST00000337841 AIFM3Q96NN9 605 aa13.65□□□□□ -0.22
SPTLC1-202ENST00000337841 BRMS1Q9HCU9 246 aa13.65□□□□□ -0.22
SPTLC1-202ENST00000337841 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.65□□□□□ -0.22
SPTLC1-202ENST00000337841 FLRT1Q9NZU1 646 aa13.65□□□□□ -0.22
SPTLC1-202ENST00000337841 COL20A1Q9P218 1284 aa13.65□□□□□ -0.22
SPTLC1-202ENST00000337841 NRBP1Q9UHY1 535 aa13.65□□□□□ -0.22
SPTLC1-202ENST00000337841 PCDHA6Q9UN73 950 aa13.65□□□□□ -0.22
SPTLC1-202ENST00000337841 PCDHA4Q9UN74 947 aa13.65□□□□□ -0.22
SPTLC1-202ENST00000337841 PCDHA8Q9Y5H6 950 aa13.65□□□□□ -0.22
SPTLC1-202ENST00000337841 BAZ2BQ9UIF8 2168 aaKnown RBP13.64□□□□□ -0.23
SPTLC1-202ENST00000337841 INHAP05111 366 aa13.64□□□□□ -0.23
SPTLC1-202ENST00000337841 HSP90AA1P07900 732 aaKnown RBP13.64□□□□□ -0.23
SPTLC1-202ENST00000337841 NR3C2P08235 984 aa13.64□□□□□ -0.23
SPTLC1-202ENST00000337841 EIF2AK2P19525 551 aaKnown RBP13.64□□□□□ -0.23
SPTLC1-202ENST00000337841 AP3B2Q13367 1082 aa13.64□□□□□ -0.23
SPTLC1-202ENST00000337841 BECN1Q14457 450 aa13.64□□□□□ -0.23
SPTLC1-202ENST00000337841 SAFBQ15424 915 aaKnown RBP eCLIP13.64□□□□□ -0.23
SPTLC1-202ENST00000337841 STXBP2Q15833 593 aa13.64□□□□□ -0.23
SPTLC1-202ENST00000337841 UBE2SQ16763 222 aa13.64□□□□□ -0.23
SPTLC1-202ENST00000337841 ARMCX2Q7L311 632 aa13.64□□□□□ -0.23
SPTLC1-202ENST00000337841 BLIDQ8IZY5 108 aa13.64□□□□□ -0.23
SPTLC1-202ENST00000337841 REXO1Q8N1G1 1221 aaKnown RBP13.64□□□□□ -0.23
SPTLC1-202ENST00000337841 INTS4Q96HW7 963 aaKnown RBP13.64□□□□□ -0.23
SPTLC1-202ENST00000337841 C8orf76Q96K31 380 aa13.64□□□□□ -0.23
SPTLC1-202ENST00000337841 FGD4Q96M96 766 aa13.64□□□□□ -0.23
SPTLC1-202ENST00000337841 ABHD16BQ9H3Z7 469 aa13.64□□□□□ -0.23
SPTLC1-202ENST00000337841 PXMP2Q9NR77 195 aa13.64□□□□□ -0.23
SPTLC1-202ENST00000337841 KCNJ14Q9UNX9 436 aa13.64□□□□□ -0.23
SPTLC1-202ENST00000337841 COL11A1P12107 1806 aaPredicted RBP13.63□□□□□ -0.23
SPTLC1-202ENST00000337841 EIF3JO75822 258 aaKnown RBP13.63□□□□□ -0.23
SPTLC1-202ENST00000337841 SNAI1O95863 264 aaPredicted RBP13.63□□□□□ -0.23
SPTLC1-202ENST00000337841 IGHA2P01877 340 aa13.63□□□□□ -0.23
SPTLC1-202ENST00000337841 MYCLP12524 364 aaPredicted RBP13.63□□□□□ -0.23
SPTLC1-202ENST00000337841 PRKAR2AP13861 404 aaKnown RBP13.63□□□□□ -0.23
SPTLC1-202ENST00000337841 GJB2P29033 226 aa13.63□□□□□ -0.23
SPTLC1-202ENST00000337841 CNGA1P29973 690 aa13.63□□□□□ -0.23
SPTLC1-202ENST00000337841 CCND2P30279 289 aa13.63□□□□□ -0.23
SPTLC1-202ENST00000337841 CACNB2Q08289 660 aaPredicted RBP13.63□□□□□ -0.23
SPTLC1-202ENST00000337841 ACVR2BQ13705 512 aa13.63□□□□□ -0.23
SPTLC1-202ENST00000337841 JAKMIP3Q5VZ66 844 aa13.63□□□□□ -0.23
SPTLC1-202ENST00000337841 XRRA1Q6P2D8 792 aa13.63□□□□□ -0.23
SPTLC1-202ENST00000337841 DAGLBQ8NCG7 672 aa13.63□□□□□ -0.23
SPTLC1-202ENST00000337841 MORC4Q8TE76 937 aa13.63□□□□□ -0.23
SPTLC1-202ENST00000337841 ARMC5Q96C12 935 aa13.63□□□□□ -0.23
SPTLC1-202ENST00000337841 PDCD2LQ9BRP1 358 aa13.63□□□□□ -0.23
SPTLC1-202ENST00000337841 PHF20Q9BVI0 1012 aa13.63□□□□□ -0.23
SPTLC1-202ENST00000337841 HMX1Q9NP08 348 aaPredicted RBP13.63□□□□□ -0.23
SPTLC1-202ENST00000337841 RPTORQ8N122 1335 aa13.63□□□□□ -0.23
SPTLC1-202ENST00000337841 EDNRBP24530 442 aa13.62□□□□□ -0.23
SPTLC1-202ENST00000337841 TRIM32Q13049 653 aa13.62□□□□□ -0.23
SPTLC1-202ENST00000337841 PRAMEF19Q5SWL8 479 aa13.62□□□□□ -0.23
SPTLC1-202ENST00000337841 MAP3K21Q5TCX8 1036 aa13.62□□□□□ -0.23
SPTLC1-202ENST00000337841 KRT40Q6A162 431 aa13.62□□□□□ -0.23
SPTLC1-202ENST00000337841 VSIG10LQ86VR7 867 aa13.62□□□□□ -0.23
SPTLC1-202ENST00000337841 TNS4Q8IZW8 715 aa13.62□□□□□ -0.23
SPTLC1-202ENST00000337841 TMEM106CQ9BVX2 250 aa13.62□□□□□ -0.23
SPTLC1-202ENST00000337841 VTA1Q9NP79 307 aa13.62□□□□□ -0.23
SPTLC1-202ENST00000337841 TMEM260Q9NX78 707 aa13.62□□□□□ -0.23
SPTLC1-202ENST00000337841 FAM184BQ9ULE4 1060 aa13.62□□□□□ -0.23
SPTLC1-202ENST00000337841 STAM2O75886 525 aa13.61□□□□□ -0.23
SPTLC1-202ENST00000337841 PDCP20941 246 aa13.61□□□□□ -0.23
SPTLC1-202ENST00000337841 KRT2P35908 639 aa13.61□□□□□ -0.23
SPTLC1-202ENST00000337841 CLK2P49760 499 aaKnown RBP13.61□□□□□ -0.23
SPTLC1-202ENST00000337841 FOSBP53539 338 aa13.61□□□□□ -0.23
SPTLC1-202ENST00000337841 PGM5Q15124 567 aa13.61□□□□□ -0.23
SPTLC1-202ENST00000337841 LARP1BQ659C4 914 aaKnown RBP13.61□□□□□ -0.23
SPTLC1-202ENST00000337841 IQSEC1Q6DN90 963 aa13.61□□□□□ -0.23
SPTLC1-202ENST00000337841 KRT25Q7Z3Z0 450 aa13.61□□□□□ -0.23
SPTLC1-202ENST00000337841 FBXO18Q8NFZ0 1043 aa13.61□□□□□ -0.23
SPTLC1-202ENST00000337841 SHISA4Q96DD7 197 aa13.61□□□□□ -0.23
SPTLC1-202ENST00000337841 ZNF333Q96JL9 665 aa13.61□□□□□ -0.23
SPTLC1-202ENST00000337841 ANO3Q9BYT9 981 aa13.61□□□□□ -0.23
SPTLC1-202ENST00000337841 RNF208Q9H0X6 261 aa13.61□□□□□ -0.23
SPTLC1-202ENST00000337841 GJB4Q9NTQ9 266 aa13.61□□□□□ -0.23
SPTLC1-202ENST00000337841 ZHX1Q9UKY1 873 aaPredicted RBP13.61□□□□□ -0.23
SPTLC1-202ENST00000337841 ASTN1O14525 1302 aa13.61□□□□□ -0.23
SPTLC1-202ENST00000337841 CCDC194A0A1B0GVG4 234 aa13.6□□□□□ -0.23
SPTLC1-202ENST00000337841 H3BQV1 296 aa13.6□□□□□ -0.23
SPTLC1-202ENST00000337841 MSCO60682 206 aa13.6□□□□□ -0.23
SPTLC1-202ENST00000337841 MYCP01106 439 aaPredicted RBP13.6□□□□□ -0.23
SPTLC1-202ENST00000337841 MMP1P03956 469 aa13.6□□□□□ -0.23
SPTLC1-202ENST00000337841 ZNF865P0CJ78 1059 aaPredicted RBP13.6□□□□□ -0.23
SPTLC1-202ENST00000337841 CCL5P13501 91 aa13.6□□□□□ -0.23
SPTLC1-202ENST00000337841 ZNF76P36508 570 aa13.6□□□□□ -0.23
SPTLC1-202ENST00000337841 GUCY1B3Q02153 619 aa13.6□□□□□ -0.23
SPTLC1-202ENST00000337841 GNL2Q13823 731 aaKnown RBP13.6□□□□□ -0.23
SPTLC1-202ENST00000337841 IFFO2Q5TF58 517 aa13.6□□□□□ -0.23
SPTLC1-202ENST00000337841 PCNX4Q63HM2 1172 aa13.6□□□□□ -0.23
SPTLC1-202ENST00000337841 KCNV1Q6PIU1 500 aa13.6□□□□□ -0.23
SPTLC1-202ENST00000337841 EEPD1Q7L9B9 569 aa13.6□□□□□ -0.23
SPTLC1-202ENST00000337841 NLRX1Q86UT6 975 aa13.6□□□□□ -0.23
SPTLC1-202ENST00000337841 PCNTO95613 3336 aa13.59□□□□□ -0.23
SPTLC1-202ENST00000337841 SEPT4O43236 478 aa13.59□□□□□ -0.23
SPTLC1-202ENST00000337841 CYBAP13498 195 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms