RNA–Protein interactions for RNA: ENST00000336300.9

MRPL55-202, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-202ENST00000336300 RNF26Q9BY78 433 aaPredicted RBP18.19■□□□□ 0.5
MRPL55-202ENST00000336300 GLT8D2Q9H1C3 349 aa18.19■□□□□ 0.5
MRPL55-202ENST00000336300 ASTN1O14525 1302 aa18.19■□□□□ 0.5
MRPL55-202ENST00000336300 DUSP11O75319 330 aaKnown RBP18.18■□□□□ 0.5
MRPL55-202ENST00000336300 MYCNP04198 464 aaPredicted RBP18.18■□□□□ 0.5
MRPL55-202ENST00000336300 SSRP1Q08945 709 aaKnown RBP18.18■□□□□ 0.5
MRPL55-202ENST00000336300 PFKFB3Q16875 520 aaPredicted RBP18.18■□□□□ 0.5
MRPL55-202ENST00000336300 RNF180Q86T96 592 aa18.18■□□□□ 0.5
MRPL55-202ENST00000336300 SLC26A6Q9BXS9 759 aa18.18■□□□□ 0.5
MRPL55-202ENST00000336300 NCOA5Q9HCD5 579 aaKnown RBP18.18■□□□□ 0.5
MRPL55-202ENST00000336300 XPNPEP3Q9NQH7 507 aa18.18■□□□□ 0.5
MRPL55-202ENST00000336300 PXMP2Q9NR77 195 aa18.18■□□□□ 0.5
MRPL55-202ENST00000336300 BARHL2Q9NY43 387 aa18.18■□□□□ 0.5
MRPL55-202ENST00000336300 KBTBD13C9JR72 458 aa18.17■□□□□ 0.5
MRPL55-202ENST00000336300 PIK3CDO00329 1044 aa18.17■□□□□ 0.5
MRPL55-202ENST00000336300 SCG2P13521 617 aa18.17■□□□□ 0.5
MRPL55-202ENST00000336300 EIF2AK2P19525 551 aaKnown RBP18.17■□□□□ 0.5
MRPL55-202ENST00000336300 EDNRBP24530 442 aa18.17■□□□□ 0.5
MRPL55-202ENST00000336300 TNFAIP2Q03169 654 aa18.17■□□□□ 0.5
MRPL55-202ENST00000336300 WWC2Q6AWC2 1192 aa18.17■□□□□ 0.5
MRPL55-202ENST00000336300 FBXO16Q8IX29 292 aaPredicted RBP18.17■□□□□ 0.5
MRPL55-202ENST00000336300 GPKOWQ92917 476 aaPredicted RBP eCLIP18.17■□□□□ 0.5
MRPL55-202ENST00000336300 PHKBQ93100 1093 aa18.17■□□□□ 0.5
MRPL55-202ENST00000336300 COL20A1Q9P218 1284 aa18.17■□□□□ 0.5
MRPL55-202ENST00000336300 TPCN1Q9ULQ1 816 aa18.17■□□□□ 0.5
MRPL55-202ENST00000336300 DNM1LO00429 736 aa18.16■□□□□ 0.5
MRPL55-202ENST00000336300 PFKFB2O60825 505 aa18.16■□□□□ 0.5
MRPL55-202ENST00000336300 EIF3JO75822 258 aaKnown RBP18.16■□□□□ 0.5
MRPL55-202ENST00000336300 NR3C2P08235 984 aa18.16■□□□□ 0.5
MRPL55-202ENST00000336300 NTRK3Q16288 839 aa18.16■□□□□ 0.5
MRPL55-202ENST00000336300 USP17L6PQ6QN14 398 aa18.16■□□□□ 0.5
MRPL55-202ENST00000336300 PAWRQ96IZ0 340 aaKnown RBP18.16■□□□□ 0.5
MRPL55-202ENST00000336300 HTATIP2Q9BUP3 242 aa18.16■□□□□ 0.5
MRPL55-202ENST00000336300 KATNBL1Q9H079 304 aa18.16■□□□□ 0.5
MRPL55-202ENST00000336300 C11orf49Q9H6J7 331 aa18.16■□□□□ 0.5
MRPL55-202ENST00000336300 EHMT1Q9H9B1 1298 aa18.16■□□□□ 0.5
MRPL55-202ENST00000336300 SMCO2A6NFE2 343 aa18.15■□□□□ 0.5
MRPL55-202ENST00000336300 SPDYE3A6NKU9 549 aa18.15■□□□□ 0.5
MRPL55-202ENST00000336300 MEIS2O14770 477 aa18.15■□□□□ 0.5
MRPL55-202ENST00000336300 MYCLP12524 364 aaPredicted RBP18.15■□□□□ 0.5
MRPL55-202ENST00000336300 CCND2P30279 289 aa18.15■□□□□ 0.5
MRPL55-202ENST00000336300 ADCYAP1R1P41586 468 aa18.15■□□□□ 0.5
MRPL55-202ENST00000336300 ADCY7P51828 1080 aa18.15■□□□□ 0.5
MRPL55-202ENST00000336300 RABEP1Q15276 862 aa18.15■□□□□ 0.5
MRPL55-202ENST00000336300 TAPT1Q6NXT6 567 aa18.15■□□□□ 0.5
MRPL55-202ENST00000336300 SCFD2Q8WU76 684 aa18.15■□□□□ 0.5
MRPL55-202ENST00000336300 PDCD2LQ9BRP1 358 aa18.15■□□□□ 0.5
MRPL55-202ENST00000336300 WDR11Q9BZH6 1224 aa18.15■□□□□ 0.5
MRPL55-202ENST00000336300 AP5M1Q9H0R1 490 aa18.15■□□□□ 0.5
MRPL55-202ENST00000336300 RIC8AQ9NPQ8 531 aa18.15■□□□□ 0.5
MRPL55-202ENST00000336300 STXBP3O00186 592 aa18.14■□□□□ 0.49
MRPL55-202ENST00000336300 ST18O60284 1047 aa18.14■□□□□ 0.49
MRPL55-202ENST00000336300 DEXIO95424 95 aa18.14■□□□□ 0.49
MRPL55-202ENST00000336300 GNA11P29992 359 aa18.14■□□□□ 0.49
MRPL55-202ENST00000336300 SCRN1Q12765 414 aa18.14■□□□□ 0.49
MRPL55-202ENST00000336300 TTLL4Q14679 1199 aa18.14■□□□□ 0.49
MRPL55-202ENST00000336300 PGM5Q15124 567 aa18.14■□□□□ 0.49
MRPL55-202ENST00000336300 GJC2Q5T442 439 aaPredicted RBP18.14■□□□□ 0.49
MRPL55-202ENST00000336300 CCDC148Q8NFR7 591 aa18.14■□□□□ 0.49
MRPL55-202ENST00000336300 BACH2Q9BYV9 841 aa18.14■□□□□ 0.49
MRPL55-202ENST00000336300 C6orf50Q9HD87 102 aa18.14■□□□□ 0.49
MRPL55-202ENST00000336300 PDGFCQ9NRA1 345 aa18.14■□□□□ 0.49
MRPL55-202ENST00000336300 LIMCH1Q9UPQ0 1083 aa18.14■□□□□ 0.49
MRPL55-202ENST00000336300 Q9Y3F1 56 aa18.14■□□□□ 0.49
MRPL55-202ENST00000336300 DDX49Q9Y6V7 483 aaKnown RBP18.14■□□□□ 0.49
MRPL55-202ENST00000336300 RBM47A0AV96 593 aaKnown RBP18.13■□□□□ 0.49
MRPL55-202ENST00000336300 NKRFO15226 690 aaKnown RBP eCLIP18.13■□□□□ 0.49
MRPL55-202ENST00000336300 STAM2O75886 525 aa18.13■□□□□ 0.49
MRPL55-202ENST00000336300 PGK1P00558 417 aa18.13■□□□□ 0.49
MRPL55-202ENST00000336300 FOSP01100 380 aaPredicted RBP18.13■□□□□ 0.49
MRPL55-202ENST00000336300 C6orf222P0C671 652 aaPredicted RBP18.13■□□□□ 0.49
MRPL55-202ENST00000336300 LRRC41Q15345 812 aa18.13■□□□□ 0.49
MRPL55-202ENST00000336300 DUSP28Q4G0W2 176 aa18.13■□□□□ 0.49
MRPL55-202ENST00000336300 MCTP2Q6DN12 878 aa18.13■□□□□ 0.49
MRPL55-202ENST00000336300 XRRA1Q6P2D8 792 aa18.13■□□□□ 0.49
MRPL55-202ENST00000336300 KCNV1Q6PIU1 500 aa18.13■□□□□ 0.49
MRPL55-202ENST00000336300 SEPT14Q6ZU15 432 aa18.13■□□□□ 0.49
MRPL55-202ENST00000336300 UBE2Q1Q7Z7E8 422 aa18.13■□□□□ 0.49
MRPL55-202ENST00000336300 VSIG10LQ86VR7 867 aa18.13■□□□□ 0.49
MRPL55-202ENST00000336300 PCSK9Q8NBP7 692 aaKnown RBP18.13■□□□□ 0.49
MRPL55-202ENST00000336300 BICD2Q8TD16 824 aa18.13■□□□□ 0.49
MRPL55-202ENST00000336300 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.12■□□□□ 0.49
MRPL55-202ENST00000336300 DYNC1LI2O43237 492 aaPredicted RBP18.12■□□□□ 0.49
MRPL55-202ENST00000336300 ZEB2O60315 1214 aa18.12■□□□□ 0.49
MRPL55-202ENST00000336300 PPFIA3O75145 1194 aa18.12■□□□□ 0.49
MRPL55-202ENST00000336300 TXNP10599 105 aaKnown RBP18.12■□□□□ 0.49
MRPL55-202ENST00000336300 SMPD1P17405 629 aa18.12■□□□□ 0.49
MRPL55-202ENST00000336300 XBP1P17861 261 aa18.12■□□□□ 0.49
MRPL55-202ENST00000336300 GJA9P57773 515 aa18.12■□□□□ 0.49
MRPL55-202ENST00000336300 PKN1Q16512 942 aa18.12■□□□□ 0.49
MRPL55-202ENST00000336300 ME3Q16798 604 aa18.12■□□□□ 0.49
MRPL55-202ENST00000336300 GNPTABQ3T906 1256 aa18.12■□□□□ 0.49
MRPL55-202ENST00000336300 BRDTQ58F21 947 aaPredicted RBP18.12■□□□□ 0.49
MRPL55-202ENST00000336300 DPF3Q92784 378 aa18.12■□□□□ 0.49
MRPL55-202ENST00000336300 ZSCAN31Q96LW9 406 aaPredicted RBP18.12■□□□□ 0.49
MRPL55-202ENST00000336300 TSEN34Q9BSV6 310 aaKnown RBP18.12■□□□□ 0.49
MRPL55-202ENST00000336300 SH3GLB2Q9NR46 395 aa18.12■□□□□ 0.49
MRPL55-202ENST00000336300 ESYT2A0FGR8 921 aa18.11■□□□□ 0.49
MRPL55-202ENST00000336300 UBE2SQ16763 222 aa18.11■□□□□ 0.49
MRPL55-202ENST00000336300 GNASQ5JWF2 1037 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms